RNA–Protein interactions for RNA: ENST00000549347.1

RAPGEF3-220, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene RAPGEF3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-220ENST00000549347 L3MBTL3Q96JM7 780 aaPredicted RBP21.97■■□□□ 1.11
RAPGEF3-220ENST00000549347 CXCL9Q07325 125 aa21.96■■□□□ 1.11
RAPGEF3-220ENST00000549347 PUM3Q15397 648 aaKnown RBP21.96■■□□□ 1.11
RAPGEF3-220ENST00000549347 COA1Q9GZY4 146 aa21.96■■□□□ 1.11
RAPGEF3-220ENST00000549347 ZNF609O15014 1411 aa21.96■■□□□ 1.11
RAPGEF3-220ENST00000549347 G3V3G9 751 aa21.95■■□□□ 1.1
RAPGEF3-220ENST00000549347 FGFR2P21802 821 aa21.95■■□□□ 1.1
RAPGEF3-220ENST00000549347 DCAF8Q5TAQ9 597 aa21.95■■□□□ 1.1
RAPGEF3-220ENST00000549347 CIAPIN1Q6FI81 312 aa21.95■■□□□ 1.1
RAPGEF3-220ENST00000549347 PODNQ7Z5L7 613 aa21.95■■□□□ 1.1
RAPGEF3-220ENST00000549347 RPAP2Q8IXW5 612 aaPredicted RBP21.95■■□□□ 1.1
RAPGEF3-220ENST00000549347 NMRK2Q9NPI5 230 aa21.95■■□□□ 1.1
RAPGEF3-220ENST00000549347 CEP126Q9P2H0 1117 aa21.94■■□□□ 1.1
RAPGEF3-220ENST00000549347 RAD17O75943 681 aa21.93■■□□□ 1.1
RAPGEF3-220ENST00000549347 TNIP1Q15025 636 aa21.93■■□□□ 1.1
RAPGEF3-220ENST00000549347 NOP58Q9Y2X3 529 aaKnown RBP21.93■■□□□ 1.1
RAPGEF3-220ENST00000549347 SUPT16HQ9Y5B9 1047 aaKnown RBP21.93■■□□□ 1.1
RAPGEF3-220ENST00000549347 MYH13Q9UKX3 1938 aa21.92■■□□□ 1.1
RAPGEF3-220ENST00000549347 ZNF804AQ7Z570 1209 aa21.92■■□□□ 1.1
RAPGEF3-220ENST00000549347 SIRT2Q8IXJ6 389 aa21.92■■□□□ 1.1
RAPGEF3-220ENST00000549347 CRBNQ96SW2 442 aa21.92■■□□□ 1.1
RAPGEF3-220ENST00000549347 GJA3Q9Y6H8 435 aa21.92■■□□□ 1.1
RAPGEF3-220ENST00000549347 POTECB2RU33 542 aa21.91■■□□□ 1.1
RAPGEF3-220ENST00000549347 PSMD14O00487 310 aa21.91■■□□□ 1.1
RAPGEF3-220ENST00000549347 KIF3CO14782 793 aa21.91■■□□□ 1.1
RAPGEF3-220ENST00000549347 G3BP1Q13283 466 aaKnown RBP eCLIP21.91■■□□□ 1.1
RAPGEF3-220ENST00000549347 LPIN2Q92539 896 aa21.91■■□□□ 1.1
RAPGEF3-220ENST00000549347 CD209Q9NNX6 404 aa21.91■■□□□ 1.1
RAPGEF3-220ENST00000549347 KCNQ5Q9NR82 932 aa21.91■■□□□ 1.1
RAPGEF3-220ENST00000549347 HMMRO75330 724 aa21.9■■□□□ 1.1
RAPGEF3-220ENST00000549347 IFIT1P09914 478 aaKnown RBP21.9■■□□□ 1.1
RAPGEF3-220ENST00000549347 SLC5A1P13866 664 aa21.9■■□□□ 1.1
RAPGEF3-220ENST00000549347 IL1R1P14778 569 aa21.9■■□□□ 1.1
RAPGEF3-220ENST00000549347 SCNN1DP51172 638 aa21.9■■□□□ 1.1
RAPGEF3-220ENST00000549347 ATP2B3Q16720 1220 aa21.9■■□□□ 1.1
RAPGEF3-220ENST00000549347 RRAGCQ9HB90 399 aa21.9■■□□□ 1.1
RAPGEF3-220ENST00000549347 ADAMTSL1Q8N6G6 1762 aa21.89■■□□□ 1.1
RAPGEF3-220ENST00000549347 IQCA1LA6NCM1 817 aa21.89■■□□□ 1.09
RAPGEF3-220ENST00000549347 SURF6O75683 361 aaKnown RBP21.89■■□□□ 1.09
RAPGEF3-220ENST00000549347 VIL1P09327 827 aaKnown RBP21.89■■□□□ 1.09
RAPGEF3-220ENST00000549347 VEGFAP15692 232 aaPredicted RBP21.89■■□□□ 1.09
RAPGEF3-220ENST00000549347 GYG1P46976 350 aa21.89■■□□□ 1.09
RAPGEF3-220ENST00000549347 TFCP2Q12800 502 aa21.89■■□□□ 1.09
RAPGEF3-220ENST00000549347 FAM84BQ96KN1 310 aaPredicted RBP21.89■■□□□ 1.09
RAPGEF3-220ENST00000549347 USP17L3A6NCW0 530 aa21.88■■□□□ 1.09
RAPGEF3-220ENST00000549347 USP17L4A6NCW7 530 aa21.88■■□□□ 1.09
RAPGEF3-220ENST00000549347 SASH1O94885 1247 aa21.88■■□□□ 1.09
RAPGEF3-220ENST00000549347 HIBADHP31937 336 aaKnown RBP21.88■■□□□ 1.09
RAPGEF3-220ENST00000549347 USP17L1Q7RTZ2 530 aa21.88■■□□□ 1.09
RAPGEF3-220ENST00000549347 FBXO33Q7Z6M2 555 aa21.88■■□□□ 1.09
RAPGEF3-220ENST00000549347 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.88■■□□□ 1.09
RAPGEF3-220ENST00000549347 RPS12P25398 132 aaKnown RBP21.87■■□□□ 1.09
RAPGEF3-220ENST00000549347 GMPSP49915 693 aaPredicted RBP21.87■■□□□ 1.09
RAPGEF3-220ENST00000549347 CAVIN4Q5BKX8 364 aa21.87■■□□□ 1.09
RAPGEF3-220ENST00000549347 STRIP1Q5VSL9 837 aa21.87■■□□□ 1.09
RAPGEF3-220ENST00000549347 AKAP2Q9Y2D5 859 aa21.87■■□□□ 1.09
RAPGEF3-220ENST00000549347 OS9Q13438 667 aaPredicted RBP21.86■■□□□ 1.09
RAPGEF3-220ENST00000549347 DACT2Q5SW24 774 aa21.86■■□□□ 1.09
RAPGEF3-220ENST00000549347 RSBN1LQ6PCB5 846 aaPredicted RBP21.86■■□□□ 1.09
RAPGEF3-220ENST00000549347 TDRD7Q8NHU6 1098 aaKnown RBP21.86■■□□□ 1.09
RAPGEF3-220ENST00000549347 GPRC5DQ9NZD1 345 aa21.86■■□□□ 1.09
RAPGEF3-220ENST00000549347 HACL1Q9UJ83 578 aa21.86■■□□□ 1.09
RAPGEF3-220ENST00000549347 A0A1B0GUL7 405 aa21.85■■□□□ 1.09
RAPGEF3-220ENST00000549347 LMOD1P29536 600 aaPredicted RBP21.85■■□□□ 1.09
RAPGEF3-220ENST00000549347 AAMPQ13685 434 aa21.85■■□□□ 1.09
RAPGEF3-220ENST00000549347 HSP90AB4PQ58FF6 505 aa21.85■■□□□ 1.09
RAPGEF3-220ENST00000549347 DPF2Q92785 391 aa21.85■■□□□ 1.09
RAPGEF3-220ENST00000549347 TAF1DQ9H5J8 278 aaPredicted RBP21.85■■□□□ 1.09
RAPGEF3-220ENST00000549347 GPR108Q9NPR9 543 aa21.85■■□□□ 1.09
RAPGEF3-220ENST00000549347 EXOC6BQ9Y2D4 811 aa21.85■■□□□ 1.09
RAPGEF3-220ENST00000549347 ZBTB12Q9Y330 459 aaPredicted RBP21.85■■□□□ 1.09
RAPGEF3-220ENST00000549347 MYO3BQ8WXR4 1341 aa21.84■■□□□ 1.09
RAPGEF3-220ENST00000549347 VPS37DQ86XT2 251 aa21.84■■□□□ 1.09
RAPGEF3-220ENST00000549347 ERC1Q8IUD2 1116 aa21.84■■□□□ 1.09
RAPGEF3-220ENST00000549347 AGBL3Q8NEM8 1001 aa21.84■■□□□ 1.09
RAPGEF3-220ENST00000549347 FAM205AQ6ZU69 1335 aa21.83■■□□□ 1.09
RAPGEF3-220ENST00000549347 ZBTB22O15209 634 aa21.83■■□□□ 1.09
RAPGEF3-220ENST00000549347 EPHX2P34913 555 aa21.83■■□□□ 1.09
RAPGEF3-220ENST00000549347 BCAMP50895 628 aa21.83■■□□□ 1.09
RAPGEF3-220ENST00000549347 GTF2IP78347 998 aa21.83■■□□□ 1.09
RAPGEF3-220ENST00000549347 TTLL5Q6EMB2 1281 aa21.83■■□□□ 1.09
RAPGEF3-220ENST00000549347 GMLQ99445 158 aa21.83■■□□□ 1.09
RAPGEF3-220ENST00000549347 PCDHB15Q9Y5E8 787 aa21.83■■□□□ 1.09
RAPGEF3-220ENST00000549347 COL1A1P02452 1464 aaPredicted RBP21.83■■□□□ 1.08
RAPGEF3-220ENST00000549347 ADORA1P30542 326 aa21.82■■□□□ 1.08
RAPGEF3-220ENST00000549347 EPS15P42566 896 aa21.82■■□□□ 1.08
RAPGEF3-220ENST00000549347 FKBP1AP62942 108 aaKnown RBP21.82■■□□□ 1.08
RAPGEF3-220ENST00000549347 TNNI3KQ59H18 835 aa21.82■■□□□ 1.08
RAPGEF3-220ENST00000549347 FPGT-TNNI3KV9GXZ4 949 aa21.82■■□□□ 1.08
RAPGEF3-220ENST00000549347 TIMM10P62072 90 aa21.81■■□□□ 1.08
RAPGEF3-220ENST00000549347 MICALL2Q8IY33 904 aa21.81■■□□□ 1.08
RAPGEF3-220ENST00000549347 C16orf71Q8IYS4 520 aaPredicted RBP21.81■■□□□ 1.08
RAPGEF3-220ENST00000549347 FBXW7Q969H0 707 aa21.81■■□□□ 1.08
RAPGEF3-220ENST00000549347 XAGE2Q96GT9 111 aa21.81■■□□□ 1.08
RAPGEF3-220ENST00000549347 ADARB2Q9NS39 739 aaKnown RBP21.81■■□□□ 1.08
RAPGEF3-220ENST00000549347 RAB11FIP3O75154 756 aa21.8■■□□□ 1.08
RAPGEF3-220ENST00000549347 TOMM70O94826 608 aa21.8■■□□□ 1.08
RAPGEF3-220ENST00000549347 PHKA1P46020 1223 aa21.8■■□□□ 1.08
RAPGEF3-220ENST00000549347 MXD3Q9BW11 206 aa21.8■■□□□ 1.08
RAPGEF3-220ENST00000549347 CNOT7Q9UIV1 285 aaKnown RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms