RNA–Protein interactions for RNA: ENST00000549275.5

TROAP-209, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene TROAP, Length 348 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-209ENST00000549275 PPP1R42Q7Z4L9 355 aa14.27□□□□□ -0.13
TROAP-209ENST00000549275 C7orf61Q8IZ16 206 aa14.27□□□□□ -0.13
TROAP-209ENST00000549275 RIPOR2Q9Y4F9 1068 aa14.27□□□□□ -0.13
TROAP-209ENST00000549275 UBN2Q6ZU65 1347 aa14.26□□□□□ -0.13
TROAP-209ENST00000549275 PPP1R12BO60237 982 aaPredicted RBP14.26□□□□□ -0.13
TROAP-209ENST00000549275 DDX46Q7L014 1031 aaKnown RBP14.26□□□□□ -0.13
TROAP-209ENST00000549275 NECAB2Q7Z6G3 386 aa14.26□□□□□ -0.13
TROAP-209ENST00000549275 HELBQ8NG08 1087 aaPredicted RBP14.26□□□□□ -0.13
TROAP-209ENST00000549275 RAET1EQ8TD07 263 aa14.26□□□□□ -0.13
TROAP-209ENST00000549275 GMLQ99445 158 aa14.26□□□□□ -0.13
TROAP-209ENST00000549275 SRRDQ9UH36 339 aa14.26□□□□□ -0.13
TROAP-209ENST00000549275 DDX60Q8IY21 1712 aaKnown RBP14.25□□□□□ -0.13
TROAP-209ENST00000549275 IL13P35225 146 aa14.25□□□□□ -0.13
TROAP-209ENST00000549275 NBPF9Q3BBW0 867 aa14.25□□□□□ -0.13
TROAP-209ENST00000549275 APOBEC3FQ8IUX4 373 aaKnown RBP14.25□□□□□ -0.13
TROAP-209ENST00000549275 ARHGAP39Q9C0H5 1083 aa14.25□□□□□ -0.13
TROAP-209ENST00000549275 NSFL1CQ9UNZ2 370 aaKnown RBP14.25□□□□□ -0.13
TROAP-209ENST00000549275 MAP3K15Q6ZN16 1313 aa14.24□□□□□ -0.13
TROAP-209ENST00000549275 C6orf229H3BNL8 230 aa14.24□□□□□ -0.13
TROAP-209ENST00000549275 TFRCP02786 760 aaKnown RBP14.24□□□□□ -0.13
TROAP-209ENST00000549275 PARP10Q53GL7 1025 aa14.24□□□□□ -0.13
TROAP-209ENST00000549275 CLMNQ96JQ2 1002 aa14.24□□□□□ -0.13
TROAP-209ENST00000549275 SEMA6BQ9H3T3 888 aa14.24□□□□□ -0.13
TROAP-209ENST00000549275 TLR2O60603 784 aa14.23□□□□□ -0.13
TROAP-209ENST00000549275 FOSL2P15408 326 aa14.23□□□□□ -0.13
TROAP-209ENST00000549275 GPTP24298 496 aa14.23□□□□□ -0.13
TROAP-209ENST00000549275 MMP14P50281 582 aa14.23□□□□□ -0.13
TROAP-209ENST00000549275 ZNF34Q8IZ26 560 aa14.23□□□□□ -0.13
TROAP-209ENST00000549275 ATXN2LQ8WWM7 1075 aaKnown RBP14.23□□□□□ -0.13
TROAP-209ENST00000549275 PAWRQ96IZ0 340 aaKnown RBP14.23□□□□□ -0.13
TROAP-209ENST00000549275 ZC3H12CQ9C0D7 883 aaKnown RBP14.23□□□□□ -0.13
TROAP-209ENST00000549275 BIN2Q9UBW5 565 aaPredicted RBP14.23□□□□□ -0.13
TROAP-209ENST00000549275 POLLQ9UGP5 575 aa14.23□□□□□ -0.13
TROAP-209ENST00000549275 COL1A1P02452 1464 aaPredicted RBP14.23□□□□□ -0.13
TROAP-209ENST00000549275 TAF1P21675 1872 aa14.23□□□□□ -0.13
TROAP-209ENST00000549275 BTBD11A6QL63 1104 aa14.22□□□□□ -0.13
TROAP-209ENST00000549275 G3V3G9 751 aa14.22□□□□□ -0.13
TROAP-209ENST00000549275 WNT10BO00744 389 aa14.22□□□□□ -0.13
TROAP-209ENST00000549275 DCAF8Q5TAQ9 597 aa14.22□□□□□ -0.13
TROAP-209ENST00000549275 IL17REQ8NFR9 667 aa14.22□□□□□ -0.13
TROAP-209ENST00000549275 MYLIPQ8WY64 445 aa14.22□□□□□ -0.13
TROAP-209ENST00000549275 MS4A4AQ96JQ5 239 aa14.22□□□□□ -0.13
TROAP-209ENST00000549275 ECM2O94769 699 aaPredicted RBP14.21□□□□□ -0.13
TROAP-209ENST00000549275 SYN1P17600 705 aa14.21□□□□□ -0.13
TROAP-209ENST00000549275 GJA5P36382 358 aa14.21□□□□□ -0.13
TROAP-209ENST00000549275 KIF6Q6ZMV9 814 aa14.21□□□□□ -0.13
TROAP-209ENST00000549275 OGFOD1Q8N543 542 aa14.21□□□□□ -0.13
TROAP-209ENST00000549275 ANKLE1Q8NAG6 615 aa14.21□□□□□ -0.13
TROAP-209ENST00000549275 SLAIN1Q8ND83 568 aa14.21□□□□□ -0.13
TROAP-209ENST00000549275 CRISPLD2Q9H0B8 497 aa14.21□□□□□ -0.13
TROAP-209ENST00000549275 UNC93B1Q9H1C4 597 aa14.21□□□□□ -0.13
TROAP-209ENST00000549275 ZCCHC17Q9NP64 241 aaKnown RBP14.21□□□□□ -0.13
TROAP-209ENST00000549275 KCNQ3O43525 872 aa14.2□□□□□ -0.14
TROAP-209ENST00000549275 ANKRD13AQ8IZ07 590 aa14.2□□□□□ -0.14
TROAP-209ENST00000549275 ADAMTS19Q8TE59 1207 aa14.2□□□□□ -0.14
TROAP-209ENST00000549275 UHRF1Q96T88 793 aaPredicted RBP14.2□□□□□ -0.14
TROAP-209ENST00000549275 UTP14AQ9BVJ6 771 aaKnown RBP14.2□□□□□ -0.14
TROAP-209ENST00000549275 LRRC37AA6NMS7 1700 aa14.2□□□□□ -0.14
TROAP-209ENST00000549275 GNAT3A8MTJ3 354 aa14.19□□□□□ -0.14
TROAP-209ENST00000549275 IREB2P48200 963 aaKnown RBP14.19□□□□□ -0.14
TROAP-209ENST00000549275 TBC1D16Q8TBP0 767 aa14.19□□□□□ -0.14
TROAP-209ENST00000549275 BRI3BPQ8WY22 251 aa14.19□□□□□ -0.14
TROAP-209ENST00000549275 SIN3AQ96ST3 1273 aa14.19□□□□□ -0.14
TROAP-209ENST00000549275 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.19□□□□□ -0.14
TROAP-209ENST00000549275 PPP2R3BQ9Y5P8 575 aa14.19□□□□□ -0.14
TROAP-209ENST00000549275 MYPNQ86TC9 1320 aa14.18□□□□□ -0.14
TROAP-209ENST00000549275 OSBPP22059 807 aa14.18□□□□□ -0.14
TROAP-209ENST00000549275 GTF2A2P52657 109 aa14.18□□□□□ -0.14
TROAP-209ENST00000549275 ASB2Q96Q27 587 aa14.18□□□□□ -0.14
TROAP-209ENST00000549275 LRFN3Q9BTN0 628 aa14.18□□□□□ -0.14
TROAP-209ENST00000549275 CCL15-CCL14A0A0B4J2E2 113 aa14.17□□□□□ -0.14
TROAP-209ENST00000549275 PSMC4P43686 418 aa14.17□□□□□ -0.14
TROAP-209ENST00000549275 MRE11P49959 708 aa14.17□□□□□ -0.14
TROAP-209ENST00000549275 GPSM2P81274 684 aa14.17□□□□□ -0.14
TROAP-209ENST00000549275 CCL15Q16663 113 aa14.17□□□□□ -0.14
TROAP-209ENST00000549275 SUPT20HL1Q3ZLR7 823 aa14.17□□□□□ -0.14
TROAP-209ENST00000549275 DEFB118Q96PH6 123 aa14.17□□□□□ -0.14
TROAP-209ENST00000549275 FZD1Q9UP38 647 aa14.17□□□□□ -0.14
TROAP-209ENST00000549275 ADGRA2Q96PE1 1338 aa14.16□□□□□ -0.14
TROAP-209ENST00000549275 USP17L3A6NCW0 530 aa14.16□□□□□ -0.14
TROAP-209ENST00000549275 USP17L4A6NCW7 530 aa14.16□□□□□ -0.14
TROAP-209ENST00000549275 FOXK2Q01167 660 aa14.16□□□□□ -0.14
TROAP-209ENST00000549275 NEUROD1Q13562 356 aa14.16□□□□□ -0.14
TROAP-209ENST00000549275 GIGYF2Q6Y7W6 1299 aaKnown RBP14.16□□□□□ -0.14
TROAP-209ENST00000549275 USP17L1Q7RTZ2 530 aa14.16□□□□□ -0.14
TROAP-209ENST00000549275 FAM43AQ8N2R8 423 aa14.16□□□□□ -0.14
TROAP-209ENST00000549275 OPTNQ96CV9 577 aa14.16□□□□□ -0.14
TROAP-209ENST00000549275 DEFB129Q9H1M3 183 aa14.16□□□□□ -0.14
TROAP-209ENST00000549275 PAK6Q9NQU5 681 aaPredicted RBP14.16□□□□□ -0.14
TROAP-209ENST00000549275 CEMIPQ8WUJ3 1361 aa14.16□□□□□ -0.14
TROAP-209ENST00000549275 CDH23Q9H251 3354 aa14.16□□□□□ -0.14
TROAP-209ENST00000549275 SIPA1L3O60292 1781 aaPredicted RBP14.16□□□□□ -0.14
TROAP-209ENST00000549275 SCN9AQ15858 1988 aa14.16□□□□□ -0.14
TROAP-209ENST00000549275 PODNQ7Z5L7 613 aa14.15□□□□□ -0.14
TROAP-209ENST00000549275 GAS2L2Q8NHY3 880 aa14.15□□□□□ -0.14
TROAP-209ENST00000549275 NBPF3Q9H094 633 aa14.15□□□□□ -0.14
TROAP-209ENST00000549275 NCOR1O75376 2440 aa14.15□□□□□ -0.14
TROAP-209ENST00000549275 ALPK3Q96L96 1907 aa14.15□□□□□ -0.14
TROAP-209ENST00000549275 MYO3BQ8WXR4 1341 aa14.15□□□□□ -0.15
TROAP-209ENST00000549275 NUP98P52948 1817 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms