RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 FLAD1Q8NFF5 587 aa10□□□□□ -0.81
DEPDC4-207ENST00000549249 KIF1BPQ96EK5 621 aa10□□□□□ -0.81
DEPDC4-207ENST00000549249 NYXQ9GZU5 481 aa10□□□□□ -0.81
DEPDC4-207ENST00000549249 IL1RAPL2Q9NP60 686 aa10□□□□□ -0.81
DEPDC4-207ENST00000549249 RTL9Q8NET4 1388 aa10□□□□□ -0.81
DEPDC4-207ENST00000549249 AK9Q5TCS8 1911 aa9.99□□□□□ -0.81
DEPDC4-207ENST00000549249 RIC1Q4ADV7 1423 aa9.99□□□□□ -0.81
DEPDC4-207ENST00000549249 COL11A2P13942 1736 aaPredicted RBP9.99□□□□□ -0.81
DEPDC4-207ENST00000549249 ZBTB7AO95365 584 aa9.99□□□□□ -0.81
DEPDC4-207ENST00000549249 G3BP1Q13283 466 aaKnown RBP eCLIP9.99□□□□□ -0.81
DEPDC4-207ENST00000549249 IFIT5Q13325 482 aaKnown RBP9.99□□□□□ -0.81
DEPDC4-207ENST00000549249 OS9Q13438 667 aaPredicted RBP9.99□□□□□ -0.81
DEPDC4-207ENST00000549249 CCDC57Q2TAC2 916 aa9.99□□□□□ -0.81
DEPDC4-207ENST00000549249 LRRC24Q50LG9 513 aa9.99□□□□□ -0.81
DEPDC4-207ENST00000549249 PRR5LQ6MZQ0 368 aa9.99□□□□□ -0.81
DEPDC4-207ENST00000549249 ZNF687Q8N1G0 1237 aa9.99□□□□□ -0.81
DEPDC4-207ENST00000549249 TMC2Q8TDI7 906 aa9.99□□□□□ -0.81
DEPDC4-207ENST00000549249 PUS3Q9BZE2 481 aaKnown RBP9.99□□□□□ -0.81
DEPDC4-207ENST00000549249 SEC31BQ9NQW1 1179 aa9.99□□□□□ -0.81
DEPDC4-207ENST00000549249 ARAP2Q8WZ64 1704 aa9.99□□□□□ -0.81
DEPDC4-207ENST00000549249 C2orf72A6NCS6 295 aa9.98□□□□□ -0.81
DEPDC4-207ENST00000549249 EYA2O00167 538 aa9.98□□□□□ -0.81
DEPDC4-207ENST00000549249 SERPINB2P05120 415 aa9.98□□□□□ -0.81
DEPDC4-207ENST00000549249 SF3B3Q15393 1217 aaKnown RBP9.98□□□□□ -0.81
DEPDC4-207ENST00000549249 MSL1Q68DK7 614 aa9.98□□□□□ -0.81
DEPDC4-207ENST00000549249 TPTE2Q6XPS3 522 aa9.98□□□□□ -0.81
DEPDC4-207ENST00000549249 ERC1Q8IUD2 1116 aa9.98□□□□□ -0.81
DEPDC4-207ENST00000549249 RNF166Q96A37 237 aaPredicted RBP9.98□□□□□ -0.81
DEPDC4-207ENST00000549249 PDGFDQ9GZP0 370 aaPredicted RBP9.98□□□□□ -0.81
DEPDC4-207ENST00000549249 MTFR1LQ9H019 292 aa9.98□□□□□ -0.81
DEPDC4-207ENST00000549249 BCL11AQ9H165 835 aa9.98□□□□□ -0.81
DEPDC4-207ENST00000549249 ZNF609O15014 1411 aa9.98□□□□□ -0.81
DEPDC4-207ENST00000549249 ANKRD18BA2A2Z9 1011 aa9.97□□□□□ -0.81
DEPDC4-207ENST00000549249 CIAO1O76071 339 aa9.97□□□□□ -0.81
DEPDC4-207ENST00000549249 TFCP2Q12800 502 aa9.97□□□□□ -0.81
DEPDC4-207ENST00000549249 CCDC152Q4G0S7 254 aa9.97□□□□□ -0.81
DEPDC4-207ENST00000549249 CNBD1Q8NA66 436 aa9.97□□□□□ -0.81
DEPDC4-207ENST00000549249 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.97□□□□□ -0.81
DEPDC4-207ENST00000549249 CACNA1SQ13698 1873 aa9.97□□□□□ -0.81
DEPDC4-207ENST00000549249 HSP90B1P14625 803 aaKnown RBP9.96□□□□□ -0.82
DEPDC4-207ENST00000549249 GSPT1P15170 499 aaKnown RBP9.96□□□□□ -0.82
DEPDC4-207ENST00000549249 GTF2E1P29083 439 aaPredicted RBP9.96□□□□□ -0.82
DEPDC4-207ENST00000549249 PDE1AP54750 535 aa9.96□□□□□ -0.82
DEPDC4-207ENST00000549249 C8orf34Q49A92 452 aa9.96□□□□□ -0.82
DEPDC4-207ENST00000549249 TSHZ3Q63HK5 1081 aa9.96□□□□□ -0.82
DEPDC4-207ENST00000549249 NLGN1Q8N2Q7 840 aa9.96□□□□□ -0.82
DEPDC4-207ENST00000549249 EAF2Q96CJ1 260 aaPredicted RBP9.96□□□□□ -0.82
DEPDC4-207ENST00000549249 OSBPL3Q9H4L5 887 aa9.96□□□□□ -0.82
DEPDC4-207ENST00000549249 TLR7Q9NYK1 1049 aaKnown RBP9.96□□□□□ -0.82
DEPDC4-207ENST00000549249 STAP2Q9UGK3 403 aa9.96□□□□□ -0.82
DEPDC4-207ENST00000549249 RIPOR2Q9Y4F9 1068 aa9.96□□□□□ -0.82
DEPDC4-207ENST00000549249 KIF3CO14782 793 aa9.95□□□□□ -0.82
DEPDC4-207ENST00000549249 MMP10P09238 476 aa9.95□□□□□ -0.82
DEPDC4-207ENST00000549249 MX1P20591 662 aa9.95□□□□□ -0.82
DEPDC4-207ENST00000549249 IL15P40933 162 aaPredicted RBP9.95□□□□□ -0.82
DEPDC4-207ENST00000549249 TNNI3KQ59H18 835 aa9.95□□□□□ -0.82
DEPDC4-207ENST00000549249 TAF7LQ5H9L4 462 aa9.95□□□□□ -0.82
DEPDC4-207ENST00000549249 TTC22Q5TAA0 569 aa9.95□□□□□ -0.82
DEPDC4-207ENST00000549249 AACSQ86V21 672 aa9.95□□□□□ -0.82
DEPDC4-207ENST00000549249 CLASRPQ8N2M8 674 aaKnown RBP9.95□□□□□ -0.82
DEPDC4-207ENST00000549249 VGLL2Q8N8G2 317 aa9.95□□□□□ -0.82
DEPDC4-207ENST00000549249 NLRP3Q96P20 1036 aa9.95□□□□□ -0.82
DEPDC4-207ENST00000549249 FPGT-TNNI3KV9GXZ4 949 aa9.95□□□□□ -0.82
DEPDC4-207ENST00000549249 LRRC37AA6NMS7 1700 aa9.95□□□□□ -0.82
DEPDC4-207ENST00000549249 KIF13BQ9NQT8 1826 aa9.94□□□□□ -0.82
DEPDC4-207ENST00000549249 AOX1Q06278 1338 aa9.94□□□□□ -0.82
DEPDC4-207ENST00000549249 PTGER2P43116 358 aa9.94□□□□□ -0.82
DEPDC4-207ENST00000549249 ST5P78524 1137 aa9.94□□□□□ -0.82
DEPDC4-207ENST00000549249 CRY2Q49AN0 593 aa9.94□□□□□ -0.82
DEPDC4-207ENST00000549249 BMP2KLQ5H9B9 411 aa9.94□□□□□ -0.82
DEPDC4-207ENST00000549249 LDHAL6AQ6ZMR3 332 aa9.94□□□□□ -0.82
DEPDC4-207ENST00000549249 PI4K2BQ8TCG2 481 aa9.94□□□□□ -0.82
DEPDC4-207ENST00000549249 SLC16A10Q8TF71 515 aa9.94□□□□□ -0.82
DEPDC4-207ENST00000549249 CELF1Q92879 486 aaKnown RBP9.94□□□□□ -0.82
DEPDC4-207ENST00000549249 CCDC8Q9H0W5 538 aaPredicted RBP9.94□□□□□ -0.82
DEPDC4-207ENST00000549249 GPR108Q9NPR9 543 aa9.94□□□□□ -0.82
DEPDC4-207ENST00000549249 AKAP11Q9UKA4 1901 aa9.94□□□□□ -0.82
DEPDC4-207ENST00000549249 DLEC1Q9Y238 1755 aa9.93□□□□□ -0.82
DEPDC4-207ENST00000549249 NPHP1O15259 732 aa9.93□□□□□ -0.82
DEPDC4-207ENST00000549249 POLD1P28340 1107 aa9.93□□□□□ -0.82
DEPDC4-207ENST00000549249 ARSIQ5FYB1 569 aa9.93□□□□□ -0.82
DEPDC4-207ENST00000549249 SLC51AQ86UW1 340 aa9.93□□□□□ -0.82
DEPDC4-207ENST00000549249 CDC5LQ99459 802 aaKnown RBP9.93□□□□□ -0.82
DEPDC4-207ENST00000549249 DBNDD2Q9BQY9 259 aa9.93□□□□□ -0.82
DEPDC4-207ENST00000549249 SYT17Q9BSW7 474 aa9.93□□□□□ -0.82
DEPDC4-207ENST00000549249 FHDC1Q9C0D6 1143 aaPredicted RBP9.93□□□□□ -0.82
DEPDC4-207ENST00000549249 TSHZ2Q9NRE2 1034 aa9.93□□□□□ -0.82
DEPDC4-207ENST00000549249 CNNM1Q9NRU3 951 aa9.93□□□□□ -0.82
DEPDC4-207ENST00000549249 CEP126Q9P2H0 1117 aa9.93□□□□□ -0.82
DEPDC4-207ENST00000549249 DBNLQ9UJU6 430 aaKnown RBP9.93□□□□□ -0.82
DEPDC4-207ENST00000549249 TTC41PQ6P2S7 1318 aa9.92□□□□□ -0.82
DEPDC4-207ENST00000549249 KLRG2A4D1S0 409 aaPredicted RBP9.92□□□□□ -0.82
DEPDC4-207ENST00000549249 IFIT2P09913 472 aaKnown RBP9.92□□□□□ -0.82
DEPDC4-207ENST00000549249 IGHMBP2P38935 993 aaKnown RBP9.92□□□□□ -0.82
DEPDC4-207ENST00000549249 METTL24Q5JXM2 366 aa9.92□□□□□ -0.82
DEPDC4-207ENST00000549249 ANKRD18AQ8IVF6 992 aa9.92□□□□□ -0.82
DEPDC4-207ENST00000549249 SPRYD3Q8NCJ5 442 aa9.92□□□□□ -0.82
DEPDC4-207ENST00000549249 BACH2Q9BYV9 841 aa9.92□□□□□ -0.82
DEPDC4-207ENST00000549249 PARP3Q9Y6F1 533 aa9.92□□□□□ -0.82
DEPDC4-207ENST00000549249 LTBP1Q14766 1721 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms