RNA–Protein interactions for RNA: ENST00000549226.5

CACNB3-211, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 929 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-211ENST00000549226 SEMA3EO15041 775 aa17.21■□□□□ 0.35
CACNB3-211ENST00000549226 ADORA1P30542 326 aa17.21■□□□□ 0.35
CACNB3-211ENST00000549226 LRRFIP1Q32MZ4 808 aaKnown RBP17.21■□□□□ 0.35
CACNB3-211ENST00000549226 CCDC102BQ68D86 513 aa17.21■□□□□ 0.35
CACNB3-211ENST00000549226 TTLL6Q8N841 843 aa17.21■□□□□ 0.35
CACNB3-211ENST00000549226 KIF13BQ9NQT8 1826 aa17.21■□□□□ 0.35
CACNB3-211ENST00000549226 LRRC37AA6NMS7 1700 aa17.21■□□□□ 0.35
CACNB3-211ENST00000549226 ARAP2Q8WZ64 1704 aa17.21■□□□□ 0.35
CACNB3-211ENST00000549226 HIP1O00291 1037 aa17.2■□□□□ 0.34
CACNB3-211ENST00000549226 CHRNA5P30532 468 aa17.2■□□□□ 0.34
CACNB3-211ENST00000549226 VPS37DQ86XT2 251 aa17.2■□□□□ 0.34
CACNB3-211ENST00000549226 BOLA2Q9H3K6 86 aa17.2■□□□□ 0.34
CACNB3-211ENST00000549226 NSFL1CQ9UNZ2 370 aaKnown RBP17.2■□□□□ 0.34
CACNB3-211ENST00000549226 PDS5AQ29RF7 1337 aaKnown RBP17.2■□□□□ 0.34
CACNB3-211ENST00000549226 MED23Q9ULK4 1368 aa17.19■□□□□ 0.34
CACNB3-211ENST00000549226 IGSF3O75054 1194 aa17.19■□□□□ 0.34
CACNB3-211ENST00000549226 UFL1O94874 794 aa17.19■□□□□ 0.34
CACNB3-211ENST00000549226 GPSM2P81274 684 aa17.19■□□□□ 0.34
CACNB3-211ENST00000549226 TTF1Q15361 905 aaPredicted RBP17.19■□□□□ 0.34
CACNB3-211ENST00000549226 C8orf34Q49A92 452 aa17.19■□□□□ 0.34
CACNB3-211ENST00000549226 MPNDQ8N594 471 aa17.19■□□□□ 0.34
CACNB3-211ENST00000549226 BACH2Q9BYV9 841 aa17.19■□□□□ 0.34
CACNB3-211ENST00000549226 DPEP1P16444 411 aa17.18■□□□□ 0.34
CACNB3-211ENST00000549226 DPP8Q6V1X1 898 aaPredicted RBP17.18■□□□□ 0.34
CACNB3-211ENST00000549226 ZNF804AQ7Z570 1209 aa17.18■□□□□ 0.34
CACNB3-211ENST00000549226 FBXO33Q7Z6M2 555 aa17.18■□□□□ 0.34
CACNB3-211ENST00000549226 SUPT20HQ8NEM7 779 aa17.18■□□□□ 0.34
CACNB3-211ENST00000549226 TBC1D16Q8TBP0 767 aa17.18■□□□□ 0.34
CACNB3-211ENST00000549226 RILPL2Q969X0 211 aa17.18■□□□□ 0.34
CACNB3-211ENST00000549226 EYA3Q99504 573 aa17.18■□□□□ 0.34
CACNB3-211ENST00000549226 PIM2Q9P1W9 311 aa17.18■□□□□ 0.34
CACNB3-211ENST00000549226 SPEF2Q9C093 1822 aa17.18■□□□□ 0.34
CACNB3-211ENST00000549226 HIBADHP31937 336 aaKnown RBP17.17■□□□□ 0.34
CACNB3-211ENST00000549226 PHKA1P46020 1223 aa17.17■□□□□ 0.34
CACNB3-211ENST00000549226 C7orf43Q8WVR3 580 aa17.17■□□□□ 0.34
CACNB3-211ENST00000549226 PAG1Q9NWQ8 432 aa17.17■□□□□ 0.34
CACNB3-211ENST00000549226 DENND2AQ9ULE3 1009 aa17.17■□□□□ 0.34
CACNB3-211ENST00000549226 DLEC1Q9Y238 1755 aa17.17■□□□□ 0.34
CACNB3-211ENST00000549226 IRS2Q9Y4H2 1338 aa17.17■□□□□ 0.34
CACNB3-211ENST00000549226 A0A1B0GUL6 1792 aa17.16■□□□□ 0.34
CACNB3-211ENST00000549226 KCNA3P22001 575 aa17.16■□□□□ 0.34
CACNB3-211ENST00000549226 CCDC93Q567U6 631 aa17.16■□□□□ 0.34
CACNB3-211ENST00000549226 TMED8Q6PL24 325 aaPredicted RBP17.16■□□□□ 0.34
CACNB3-211ENST00000549226 RTKN2Q8IZC4 609 aa17.16■□□□□ 0.34
CACNB3-211ENST00000549226 FAM84BQ96KN1 310 aaPredicted RBP17.16■□□□□ 0.34
CACNB3-211ENST00000549226 DNAJC2Q99543 621 aaKnown RBP17.16■□□□□ 0.34
CACNB3-211ENST00000549226 RTFDC1Q9BY42 306 aaPredicted RBP17.16■□□□□ 0.34
CACNB3-211ENST00000549226 A0A0G2JLW4 131 aa17.15■□□□□ 0.34
CACNB3-211ENST00000549226 BCAMP50895 628 aa17.15■□□□□ 0.34
CACNB3-211ENST00000549226 DALRD3Q5D0E6 543 aaKnown RBP17.15■□□□□ 0.34
CACNB3-211ENST00000549226 TBC1D9Q6ZT07 1266 aa17.15■□□□□ 0.34
CACNB3-211ENST00000549226 KBTBD3Q8NAB2 608 aa17.15■□□□□ 0.34
CACNB3-211ENST00000549226 SPATA5Q8NB90 893 aa17.15■□□□□ 0.34
CACNB3-211ENST00000549226 FSD1Q9BTV5 496 aa17.15■□□□□ 0.34
CACNB3-211ENST00000549226 TAF1P21675 1872 aa17.14■□□□□ 0.33
CACNB3-211ENST00000549226 C6orf229H3BNL8 230 aa17.14■□□□□ 0.33
CACNB3-211ENST00000549226 SNAP23O00161 211 aa17.14■□□□□ 0.33
CACNB3-211ENST00000549226 ZFYP08048 801 aaPredicted RBP17.14■□□□□ 0.33
CACNB3-211ENST00000549226 MCAMP43121 646 aa17.14■□□□□ 0.33
CACNB3-211ENST00000549226 ZSCAN25Q6NSZ9 544 aa17.14■□□□□ 0.33
CACNB3-211ENST00000549226 RUFY2Q8WXA3 655 aa17.14■□□□□ 0.33
CACNB3-211ENST00000549226 VPS33BQ9H267 617 aa17.14■□□□□ 0.33
CACNB3-211ENST00000549226 UPF2Q9HAU5 1272 aaKnown RBP17.14■□□□□ 0.33
CACNB3-211ENST00000549226 POLLQ9UGP5 575 aa17.14■□□□□ 0.33
CACNB3-211ENST00000549226 LTBP1Q14766 1721 aa17.13■□□□□ 0.33
CACNB3-211ENST00000549226 GOLIM4O00461 696 aa17.13■□□□□ 0.33
CACNB3-211ENST00000549226 GYG1P46976 350 aa17.13■□□□□ 0.33
CACNB3-211ENST00000549226 FKBP4Q02790 459 aaKnown RBP eCLIP17.13■□□□□ 0.33
CACNB3-211ENST00000549226 RASGRF1Q13972 1273 aa17.13■□□□□ 0.33
CACNB3-211ENST00000549226 PSMD1Q99460 953 aa17.13■□□□□ 0.33
CACNB3-211ENST00000549226 ZC3H12CQ9C0D7 883 aaKnown RBP17.13■□□□□ 0.33
CACNB3-211ENST00000549226 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.13■□□□□ 0.33
CACNB3-211ENST00000549226 COA1Q9GZY4 146 aa17.13■□□□□ 0.33
CACNB3-211ENST00000549226 DIAPH3Q9NSV4 1193 aa17.13■□□□□ 0.33
CACNB3-211ENST00000549226 HMG20BQ9P0W2 317 aa17.13■□□□□ 0.33
CACNB3-211ENST00000549226 PPP1R1BQ9UD71 204 aaPredicted RBP17.13■□□□□ 0.33
CACNB3-211ENST00000549226 RAD50Q92878 1312 aa17.13■□□□□ 0.33
CACNB3-211ENST00000549226 SNED1Q8TER0 1413 aa17.13■□□□□ 0.33
CACNB3-211ENST00000549226 EPB41L2O43491 1005 aaKnown RBP17.12■□□□□ 0.33
CACNB3-211ENST00000549226 FRAT2O75474 233 aaPredicted RBP17.12■□□□□ 0.33
CACNB3-211ENST00000549226 MAP4K4O95819 1239 aaPredicted RBP17.12■□□□□ 0.33
CACNB3-211ENST00000549226 CHMLP26374 656 aa17.12■□□□□ 0.33
CACNB3-211ENST00000549226 ZAP70P43403 619 aa17.12■□□□□ 0.33
CACNB3-211ENST00000549226 ZGPATQ8N5A5 531 aaKnown RBP17.12■□□□□ 0.33
CACNB3-211ENST00000549226 REC8O95072 547 aa17.11■□□□□ 0.33
CACNB3-211ENST00000549226 IL1R1P14778 569 aa17.11■□□□□ 0.33
CACNB3-211ENST00000549226 SCARF1Q14162 830 aa17.11■□□□□ 0.33
CACNB3-211ENST00000549226 WASHC4Q2M389 1173 aa17.11■□□□□ 0.33
CACNB3-211ENST00000549226 TDRD7Q8NHU6 1098 aaKnown RBP17.11■□□□□ 0.33
CACNB3-211ENST00000549226 DUOX1Q9NRD9 1551 aa17.11■□□□□ 0.33
CACNB3-211ENST00000549226 C21orf2O43822 256 aa17.1■□□□□ 0.33
CACNB3-211ENST00000549226 KLRK1P26718 216 aa17.1■□□□□ 0.33
CACNB3-211ENST00000549226 KLHL34Q8N239 644 aa17.1■□□□□ 0.33
CACNB3-211ENST00000549226 WDR66Q8TBY9 1149 aa17.1■□□□□ 0.33
CACNB3-211ENST00000549226 CD209Q9NNX6 404 aa17.1■□□□□ 0.33
CACNB3-211ENST00000549226 SALL1Q9NSC2 1324 aa17.1■□□□□ 0.33
CACNB3-211ENST00000549226 KIAA1551Q9HCM1 1747 aa17.1■□□□□ 0.33
CACNB3-211ENST00000549226 CYP2E1P05181 493 aaPredicted RBP17.09■□□□□ 0.33
CACNB3-211ENST00000549226 MAP3K12Q12852 859 aa17.09■□□□□ 0.33
CACNB3-211ENST00000549226 TXNRD3Q86VQ6 643 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms