RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 ADAM19Q9H013 955 aa8.36□□□□□ -1.07
CCDC38-206ENST00000548771 CHRDQ9H2X0 955 aa8.36□□□□□ -1.07
CCDC38-206ENST00000548771 PPME1Q9Y570 386 aa8.36□□□□□ -1.07
CCDC38-206ENST00000548771 A6NHS1 94 aa8.35□□□□□ -1.07
CCDC38-206ENST00000548771 ALX3O95076 343 aa8.35□□□□□ -1.07
CCDC38-206ENST00000548771 DNM1Q05193 864 aaKnown RBP8.35□□□□□ -1.07
CCDC38-206ENST00000548771 CEP135Q66GS9 1140 aa8.35□□□□□ -1.07
CCDC38-206ENST00000548771 ALKBH2Q6NS38 261 aa8.35□□□□□ -1.07
CCDC38-206ENST00000548771 Q6ZS46 218 aa8.35□□□□□ -1.07
CCDC38-206ENST00000548771 C1orf127Q8N9H9 656 aa8.35□□□□□ -1.07
CCDC38-206ENST00000548771 SPACA7Q96KW9 195 aa8.35□□□□□ -1.07
CCDC38-206ENST00000548771 POP1Q99575 1024 aaKnown RBP8.35□□□□□ -1.07
CCDC38-206ENST00000548771 MRPL18Q9H0U6 180 aaKnown RBP8.35□□□□□ -1.07
CCDC38-206ENST00000548771 COL17A1Q9UMD9 1497 aaPredicted RBP8.34□□□□□ -1.07
CCDC38-206ENST00000548771 F8W735 103 aaPredicted RBP8.34□□□□□ -1.07
CCDC38-206ENST00000548771 SMNDC1O75940 238 aaKnown RBP eCLIP8.34□□□□□ -1.07
CCDC38-206ENST00000548771 FZD6O60353 706 aa8.33□□□□□ -1.08
CCDC38-206ENST00000548771 CDC27P30260 824 aa8.33□□□□□ -1.08
CCDC38-206ENST00000548771 FKBP4Q02790 459 aaKnown RBP eCLIP8.33□□□□□ -1.08
CCDC38-206ENST00000548771 ECM1Q16610 540 aa8.33□□□□□ -1.08
CCDC38-206ENST00000548771 AKTIPQ9H8T0 292 aa8.33□□□□□ -1.08
CCDC38-206ENST00000548771 KANSL3Q9P2N6 904 aa8.33□□□□□ -1.08
CCDC38-206ENST00000548771 POLIQ9UNA4 740 aa8.33□□□□□ -1.08
CCDC38-206ENST00000548771 LINC01387J3KSC0 135 aa8.32□□□□□ -1.08
CCDC38-206ENST00000548771 FAM13AO94988 1023 aa8.32□□□□□ -1.08
CCDC38-206ENST00000548771 SF3B2Q13435 895 aaKnown RBP8.32□□□□□ -1.08
CCDC38-206ENST00000548771 NCAPG2Q86XI2 1143 aa8.32□□□□□ -1.08
CCDC38-206ENST00000548771 DCAF11Q8TEB1 546 aa8.32□□□□□ -1.08
CCDC38-206ENST00000548771 LACRTQ9GZZ8 138 aa8.32□□□□□ -1.08
CCDC38-206ENST00000548771 DZANK1Q9NVP4 752 aa8.32□□□□□ -1.08
CCDC38-206ENST00000548771 USTQ9Y2C2 406 aa8.32□□□□□ -1.08
CCDC38-206ENST00000548771 MED26O95402 600 aa8.31□□□□□ -1.08
CCDC38-206ENST00000548771 ACPPP15309 386 aa8.31□□□□□ -1.08
CCDC38-206ENST00000548771 PCSK2P16519 638 aa8.31□□□□□ -1.08
CCDC38-206ENST00000548771 FSTP19883 344 aa8.31□□□□□ -1.08
CCDC38-206ENST00000548771 EPHA1P21709 976 aa8.31□□□□□ -1.08
CCDC38-206ENST00000548771 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.31□□□□□ -1.08
CCDC38-206ENST00000548771 PMEPA1Q969W9 287 aa8.31□□□□□ -1.08
CCDC38-206ENST00000548771 KCNK4Q9NYG8 393 aa8.31□□□□□ -1.08
CCDC38-206ENST00000548771 CES1P23141 567 aa8.3□□□□□ -1.08
CCDC38-206ENST00000548771 C8orf34Q49A92 452 aa8.3□□□□□ -1.08
CCDC38-206ENST00000548771 SH2B1Q9NRF2 756 aaPredicted RBP8.3□□□□□ -1.08
CCDC38-206ENST00000548771 ARID1BQ8NFD5 2236 aaPredicted RBP8.3□□□□□ -1.08
CCDC38-206ENST00000548771 FSCN2O14926 492 aa8.29□□□□□ -1.08
CCDC38-206ENST00000548771 PAX4O43316 350 aa8.29□□□□□ -1.08
CCDC38-206ENST00000548771 TNFRSF21O75509 655 aa8.29□□□□□ -1.08
CCDC38-206ENST00000548771 CD68P34810 354 aaPredicted RBP8.29□□□□□ -1.08
CCDC38-206ENST00000548771 GJD3Q8N144 294 aa8.29□□□□□ -1.08
CCDC38-206ENST00000548771 MTMR7Q9Y216 660 aa8.29□□□□□ -1.08
CCDC38-206ENST00000548771 WISP1O95388 367 aa8.28□□□□□ -1.08
CCDC38-206ENST00000548771 PTPRAP18433 802 aa8.28□□□□□ -1.08
CCDC38-206ENST00000548771 TXNDC11Q6PKC3 985 aa8.28□□□□□ -1.08
CCDC38-206ENST00000548771 TMEM102Q8N9M5 508 aaPredicted RBP8.28□□□□□ -1.08
CCDC38-206ENST00000548771 KLHL23Q8NBE8 558 aa8.28□□□□□ -1.08
CCDC38-206ENST00000548771 CCDC87Q9NVE4 849 aa8.28□□□□□ -1.08
CCDC38-206ENST00000548771 EGFL7Q9UHF1 273 aa8.28□□□□□ -1.08
CCDC38-206ENST00000548771 EREGO14944 169 aa8.27□□□□□ -1.09
CCDC38-206ENST00000548771 TRPA1O75762 1119 aa8.27□□□□□ -1.09
CCDC38-206ENST00000548771 USP5P45974 858 aa8.27□□□□□ -1.09
CCDC38-206ENST00000548771 CD97P48960 835 aa8.27□□□□□ -1.09
CCDC38-206ENST00000548771 EHHADHQ08426 723 aa8.27□□□□□ -1.09
CCDC38-206ENST00000548771 AGGF1Q8N302 714 aaeCLIP8.27□□□□□ -1.09
CCDC38-206ENST00000548771 NXPE3Q969Y0 559 aa8.27□□□□□ -1.09
CCDC38-206ENST00000548771 KLHDC7BQ96G42 594 aa8.27□□□□□ -1.09
CCDC38-206ENST00000548771 HHIPQ96QV1 700 aa8.27□□□□□ -1.09
CCDC38-206ENST00000548771 UBL7Q96S82 380 aaPredicted RBP8.27□□□□□ -1.09
CCDC38-206ENST00000548771 SOX13Q9UN79 622 aa8.27□□□□□ -1.09
CCDC38-206ENST00000548771 OAS3Q9Y6K5 1087 aaKnown RBP8.27□□□□□ -1.09
CCDC38-206ENST00000548771 PDE2AO00408 941 aaPredicted RBP8.26□□□□□ -1.09
CCDC38-206ENST00000548771 ICMTO60725 284 aa8.26□□□□□ -1.09
CCDC38-206ENST00000548771 ADAM11O75078 769 aa8.26□□□□□ -1.09
CCDC38-206ENST00000548771 COBLO75128 1261 aa8.26□□□□□ -1.09
CCDC38-206ENST00000548771 KIAA1211Q6ZU35 1233 aa8.26□□□□□ -1.09
CCDC38-206ENST00000548771 WNT8BQ93098 351 aa8.26□□□□□ -1.09
CCDC38-206ENST00000548771 FMNL2Q96PY5 1086 aa8.26□□□□□ -1.09
CCDC38-206ENST00000548771 ANO2Q9NQ90 1003 aa8.26□□□□□ -1.09
CCDC38-206ENST00000548771 FOXD3Q9UJU5 478 aaPredicted RBP8.26□□□□□ -1.09
CCDC38-206ENST00000548771 H3BRJ5 948 aa8.25□□□□□ -1.09
CCDC38-206ENST00000548771 ZNF211Q13398 564 aaPredicted RBP8.25□□□□□ -1.09
CCDC38-206ENST00000548771 SNX29Q8TEQ0 813 aa8.25□□□□□ -1.09
CCDC38-206ENST00000548771 FOXD4L4Q8WXT5 416 aaPredicted RBP8.25□□□□□ -1.09
CCDC38-206ENST00000548771 ZKSCAN3Q9BRR0 538 aa8.25□□□□□ -1.09
CCDC38-206ENST00000548771 OSGEPQ9NPF4 335 aa8.25□□□□□ -1.09
CCDC38-206ENST00000548771 ADAMTS4O75173 837 aa8.24□□□□□ -1.09
CCDC38-206ENST00000548771 TGFB1P01137 390 aa8.24□□□□□ -1.09
CCDC38-206ENST00000548771 TAL1P17542 331 aaPredicted RBP8.24□□□□□ -1.09
CCDC38-206ENST00000548771 CDC25BP30305 580 aa8.24□□□□□ -1.09
CCDC38-206ENST00000548771 TXKP42681 527 aa8.24□□□□□ -1.09
CCDC38-206ENST00000548771 IRAK1P51617 712 aa8.24□□□□□ -1.09
CCDC38-206ENST00000548771 PEAR1Q5VY43 1037 aaPredicted RBP8.24□□□□□ -1.09
CCDC38-206ENST00000548771 SLC51AQ86UW1 340 aa8.24□□□□□ -1.09
CCDC38-206ENST00000548771 OSMRQ99650 979 aa8.24□□□□□ -1.09
CCDC38-206ENST00000548771 CARD10Q9BWT7 1032 aa8.24□□□□□ -1.09
CCDC38-206ENST00000548771 ZFYVE28Q9HCC9 887 aa8.24□□□□□ -1.09
CCDC38-206ENST00000548771 DDX3YO15523 660 aaKnown RBP8.23□□□□□ -1.09
CCDC38-206ENST00000548771 PHACTR2O75167 634 aa8.23□□□□□ -1.09
CCDC38-206ENST00000548771 ABL1P00519 1130 aa8.23□□□□□ -1.09
CCDC38-206ENST00000548771 PIP4K2BP78356 416 aa8.23□□□□□ -1.09
CCDC38-206ENST00000548771 ARHGAP4P98171 946 aa8.23□□□□□ -1.09
CCDC38-206ENST00000548771 FAM117BQ6P1L5 589 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms