RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 DAXXQ9UER7 740 aaPredicted RBP14.95□□□□□ -0.02
RAB5B-204ENST00000548068 MYH13Q9UKX3 1938 aa14.94□□□□□ -0.02
RAB5B-204ENST00000548068 BBOX1O75936 387 aa14.94□□□□□ -0.02
RAB5B-204ENST00000548068 ZFYP08048 801 aaPredicted RBP14.94□□□□□ -0.02
RAB5B-204ENST00000548068 CWC27Q6UX04 472 aaKnown RBP14.94□□□□□ -0.02
RAB5B-204ENST00000548068 DEFB132Q7Z7B7 95 aa14.94□□□□□ -0.02
RAB5B-204ENST00000548068 SLC16A10Q8TF71 515 aa14.94□□□□□ -0.02
RAB5B-204ENST00000548068 FKBP4Q02790 459 aaKnown RBP eCLIP14.93□□□□□ -0.02
RAB5B-204ENST00000548068 NMIQ13287 307 aaPredicted RBP14.93□□□□□ -0.02
RAB5B-204ENST00000548068 CAVIN4Q5BKX8 364 aa14.93□□□□□ -0.02
RAB5B-204ENST00000548068 ZSCAN25Q6NSZ9 544 aa14.93□□□□□ -0.02
RAB5B-204ENST00000548068 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.93□□□□□ -0.02
RAB5B-204ENST00000548068 SNRKQ9NRH2 765 aa14.93□□□□□ -0.02
RAB5B-204ENST00000548068 DOCK2Q92608 1830 aa14.93□□□□□ -0.02
RAB5B-204ENST00000548068 XDHP47989 1333 aa14.92□□□□□ -0.02
RAB5B-204ENST00000548068 COL11A2P13942 1736 aaPredicted RBP14.92□□□□□ -0.02
RAB5B-204ENST00000548068 NPR1P16066 1061 aa14.92□□□□□ -0.02
RAB5B-204ENST00000548068 MCAMP43121 646 aa14.92□□□□□ -0.02
RAB5B-204ENST00000548068 PHKA1P46020 1223 aa14.92□□□□□ -0.02
RAB5B-204ENST00000548068 MSL1Q68DK7 614 aa14.92□□□□□ -0.02
RAB5B-204ENST00000548068 IL27Q8NEV9 243 aa14.92□□□□□ -0.02
RAB5B-204ENST00000548068 EDC3Q96F86 508 aaKnown RBP14.92□□□□□ -0.02
RAB5B-204ENST00000548068 LEMD3Q9Y2U8 911 aa14.92□□□□□ -0.02
RAB5B-204ENST00000548068 MED23Q9ULK4 1368 aa14.91□□□□□ -0.02
RAB5B-204ENST00000548068 SEMA3EO15041 775 aa14.91□□□□□ -0.02
RAB5B-204ENST00000548068 ALDH1B1P30837 517 aa14.91□□□□□ -0.02
RAB5B-204ENST00000548068 ZAP70P43403 619 aa14.91□□□□□ -0.02
RAB5B-204ENST00000548068 ANAPC15P60006 121 aa14.91□□□□□ -0.02
RAB5B-204ENST00000548068 VPS37DQ86XT2 251 aa14.91□□□□□ -0.02
RAB5B-204ENST00000548068 HELLSQ9NRZ9 838 aa14.91□□□□□ -0.02
RAB5B-204ENST00000548068 ZNF804BA4D1E1 1349 aa14.91□□□□□ -0.02
RAB5B-204ENST00000548068 ZBTB22O15209 634 aa14.9□□□□□ -0.02
RAB5B-204ENST00000548068 RNF113AO15541 343 aaKnown RBP14.9□□□□□ -0.02
RAB5B-204ENST00000548068 RABEP1Q15276 862 aa14.9□□□□□ -0.02
RAB5B-204ENST00000548068 SPATA5Q8NB90 893 aa14.9□□□□□ -0.02
RAB5B-204ENST00000548068 ANKIB1Q9P2G1 1089 aa14.9□□□□□ -0.02
RAB5B-204ENST00000548068 NDUFB9Q9Y6M9 179 aa14.9□□□□□ -0.02
RAB5B-204ENST00000548068 PDS5AQ29RF7 1337 aaKnown RBP14.9□□□□□ -0.02
RAB5B-204ENST00000548068 CCDC171Q6TFL3 1326 aa14.9□□□□□ -0.02
RAB5B-204ENST00000548068 DUOX1Q9NRD9 1551 aa14.9□□□□□ -0.02
RAB5B-204ENST00000548068 A0A0D9SFI3 127 aa14.89□□□□□ -0.03
RAB5B-204ENST00000548068 SRGNP10124 158 aa14.89□□□□□ -0.03
RAB5B-204ENST00000548068 SCARF1Q14162 830 aa14.89□□□□□ -0.03
RAB5B-204ENST00000548068 MCMDC2Q4G0Z9 681 aa14.89□□□□□ -0.03
RAB5B-204ENST00000548068 MASTLQ96GX5 879 aa14.89□□□□□ -0.03
RAB5B-204ENST00000548068 FAM227BQ96M60 508 aa14.89□□□□□ -0.03
RAB5B-204ENST00000548068 LSG1Q9H089 658 aaKnown RBP14.89□□□□□ -0.03
RAB5B-204ENST00000548068 TMX4Q9H1E5 349 aaPredicted RBP14.89□□□□□ -0.03
RAB5B-204ENST00000548068 HMG20BQ9P0W2 317 aa14.89□□□□□ -0.03
RAB5B-204ENST00000548068 DENND2AQ9ULE3 1009 aa14.89□□□□□ -0.03
RAB5B-204ENST00000548068 PPEF1O14829 653 aaPredicted RBP14.88□□□□□ -0.03
RAB5B-204ENST00000548068 ATP2B4P23634 1241 aa14.88□□□□□ -0.03
RAB5B-204ENST00000548068 BCAMP50895 628 aa14.88□□□□□ -0.03
RAB5B-204ENST00000548068 RASGRF1Q13972 1273 aa14.88□□□□□ -0.03
RAB5B-204ENST00000548068 ZMYM1Q5SVZ6 1142 aa14.88□□□□□ -0.03
RAB5B-204ENST00000548068 C15orf52Q6ZUT6 534 aaKnown RBP14.88□□□□□ -0.03
RAB5B-204ENST00000548068 DLEC1Q9Y238 1755 aa14.88□□□□□ -0.03
RAB5B-204ENST00000548068 CACNA1SQ13698 1873 aa14.87□□□□□ -0.03
RAB5B-204ENST00000548068 LTBP1Q14766 1721 aa14.87□□□□□ -0.03
RAB5B-204ENST00000548068 H0YIN7 160 aa14.87□□□□□ -0.03
RAB5B-204ENST00000548068 SNAP23O00161 211 aa14.87□□□□□ -0.03
RAB5B-204ENST00000548068 HSPA4P34932 840 aa14.87□□□□□ -0.03
RAB5B-204ENST00000548068 MAP3K12Q12852 859 aa14.87□□□□□ -0.03
RAB5B-204ENST00000548068 STYK1Q6J9G0 422 aa14.87□□□□□ -0.03
RAB5B-204ENST00000548068 FBXO33Q7Z6M2 555 aa14.87□□□□□ -0.03
RAB5B-204ENST00000548068 HSCBQ8IWL3 235 aa14.87□□□□□ -0.03
RAB5B-204ENST00000548068 SP8Q8IXZ3 490 aa14.87□□□□□ -0.03
RAB5B-204ENST00000548068 IL17RAQ96F46 866 aa14.87□□□□□ -0.03
RAB5B-204ENST00000548068 IL25Q9H293 177 aa14.87□□□□□ -0.03
RAB5B-204ENST00000548068 ANTXR1Q9H6X2 564 aa14.87□□□□□ -0.03
RAB5B-204ENST00000548068 PODXL2Q9NZ53 605 aa14.87□□□□□ -0.03
RAB5B-204ENST00000548068 GGA1Q9UJY5 639 aa14.87□□□□□ -0.03
RAB5B-204ENST00000548068 MAST2Q6P0Q8 1798 aa14.87□□□□□ -0.03
RAB5B-204ENST00000548068 C10orf71Q711Q0 1435 aa14.86□□□□□ -0.03
RAB5B-204ENST00000548068 IGSF3O75054 1194 aa14.86□□□□□ -0.03
RAB5B-204ENST00000548068 CYP2E1P05181 493 aaPredicted RBP14.86□□□□□ -0.03
RAB5B-204ENST00000548068 HIBADHP31937 336 aaKnown RBP14.86□□□□□ -0.03
RAB5B-204ENST00000548068 GYG1P46976 350 aa14.86□□□□□ -0.03
RAB5B-204ENST00000548068 WASHC4Q2M389 1173 aa14.86□□□□□ -0.03
RAB5B-204ENST00000548068 RNF20Q5VTR2 975 aa14.86□□□□□ -0.03
RAB5B-204ENST00000548068 TMED8Q6PL24 325 aaPredicted RBP14.86□□□□□ -0.03
RAB5B-204ENST00000548068 PI16Q6UXB8 463 aa14.86□□□□□ -0.03
RAB5B-204ENST00000548068 ZNF804AQ7Z570 1209 aa14.86□□□□□ -0.03
RAB5B-204ENST00000548068 C2CD5Q86YS7 1000 aa14.86□□□□□ -0.03
RAB5B-204ENST00000548068 APPBP2Q92624 585 aa14.86□□□□□ -0.03
RAB5B-204ENST00000548068 SNX21Q969T3 373 aa14.86□□□□□ -0.03
RAB5B-204ENST00000548068 FAM84BQ96KN1 310 aaPredicted RBP14.86□□□□□ -0.03
RAB5B-204ENST00000548068 KIF2CQ99661 725 aa14.86□□□□□ -0.03
RAB5B-204ENST00000548068 ATP6V0A2Q9Y487 856 aa14.86□□□□□ -0.03
RAB5B-204ENST00000548068 MYO5AQ9Y4I1 1855 aaKnown RBP14.86□□□□□ -0.03
RAB5B-204ENST00000548068 ST18O60284 1047 aa14.85□□□□□ -0.03
RAB5B-204ENST00000548068 FRAT2O75474 233 aaPredicted RBP14.85□□□□□ -0.03
RAB5B-204ENST00000548068 IDH1O75874 414 aaKnown RBP14.85□□□□□ -0.03
RAB5B-204ENST00000548068 UFL1O94874 794 aa14.85□□□□□ -0.03
RAB5B-204ENST00000548068 UBE3CQ15386 1083 aa14.85□□□□□ -0.03
RAB5B-204ENST00000548068 MAP4K1Q92918 833 aa14.85□□□□□ -0.03
RAB5B-204ENST00000548068 U3KPZ7 1027 aaPredicted RBP14.85□□□□□ -0.03
RAB5B-204ENST00000548068 KIF13BQ9NQT8 1826 aa14.85□□□□□ -0.03
RAB5B-204ENST00000548068 ZKSCAN1P17029 563 aaPredicted RBP14.84□□□□□ -0.03
RAB5B-204ENST00000548068 ADD2P35612 726 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms