RNA–Protein interactions for RNA: ENST00000548025.5

MARF1-205, Transcript of meiosis regulator and mRNA stability factor 1, human

APPRIS ALT1 TSL 1 (best) BASIC

Gene MARF1, Length 5,891 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARF1-205	ENST00000548025	RTL9	Q8NET4	1388 aa		12.29	□□□□□ -0.44
MARF1-205	ENST00000548025	SSR1	P43307	286 aa	Known RBP	12.29	□□□□□ -0.44
MARF1-205	ENST00000548025	ZBBX	A8MT70	800 aa		12.29	□□□□□ -0.44
MARF1-205	ENST00000548025	SLC52A2	Q9HAB3	445 aa		12.29	□□□□□ -0.44
MARF1-205	ENST00000548025	GOLGA8A	A7E2F4	631 aa		12.29	□□□□□ -0.44
MARF1-205	ENST00000548025	GOLGA8B	A8MQT2	603 aa		12.29	□□□□□ -0.44
MARF1-205	ENST00000548025	GTPBP6	O43824	516 aa	Predicted RBP	12.29	□□□□□ -0.44
MARF1-205	ENST00000548025	FAM50B	Q9Y247	325 aa		12.29	□□□□□ -0.44
MARF1-205	ENST00000548025	NUP153	P49790	1475 aa	Known RBP	12.29	□□□□□ -0.44
MARF1-205	ENST00000548025	PDE4D	Q08499	809 aa		12.29	□□□□□ -0.44
MARF1-205	ENST00000548025	MCTP2	Q6DN12	878 aa		12.29	□□□□□ -0.44
MARF1-205	ENST00000548025	BRINP3	Q76B58	766 aa		12.29	□□□□□ -0.44
MARF1-205	ENST00000548025	MROH5	Q6ZUA9	1318 aa		12.28	□□□□□ -0.44
MARF1-205	ENST00000548025	KIN	O60870	393 aa	Known RBP	12.28	□□□□□ -0.44
MARF1-205	ENST00000548025	RPS8	P62241	208 aa	Known RBP	12.28	□□□□□ -0.44
MARF1-205	ENST00000548025	SHANK2	Q9UPX8	1470 aa		12.28	□□□□□ -0.44
MARF1-205	ENST00000548025	FLII	Q13045	1269 aa		12.28	□□□□□ -0.44
MARF1-205	ENST00000548025	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.28	□□□□□ -0.44
MARF1-205	ENST00000548025	PUM3	Q15397	648 aa	Known RBP	12.28	□□□□□ -0.44
MARF1-205	ENST00000548025	TXNRD1	Q16881	649 aa		12.28	□□□□□ -0.44
MARF1-205	ENST00000548025	IFIT1B	Q5T764	474 aa	Known RBP	12.28	□□□□□ -0.44
MARF1-205	ENST00000548025	JAKMIP3	Q5VZ66	844 aa		12.28	□□□□□ -0.44
MARF1-205	ENST00000548025	ELMOD1	Q8N336	334 aa		12.28	□□□□□ -0.44
MARF1-205	ENST00000548025	LEMD3	Q9Y2U8	911 aa		12.28	□□□□□ -0.44
MARF1-205	ENST00000548025	TMOD1	P28289	359 aa		12.28	□□□□□ -0.44
MARF1-205	ENST00000548025	TTF2	Q9UNY4	1162 aa	Known RBP	12.28	□□□□□ -0.44
MARF1-205	ENST00000548025	CCDC85C	A6NKD9	419 aa		12.27	□□□□□ -0.44
MARF1-205	ENST00000548025	GNAT1	P11488	350 aa		12.27	□□□□□ -0.44
MARF1-205	ENST00000548025	C1orf228	Q6PIY5	440 aa		12.27	□□□□□ -0.44
MARF1-205	ENST00000548025	EXOC8	Q8IYI6	725 aa		12.27	□□□□□ -0.44
MARF1-205	ENST00000548025	DDX17	Q92841	729 aa	Known RBP	12.27	□□□□□ -0.44
MARF1-205	ENST00000548025	HTATIP2	Q9BUP3	242 aa		12.27	□□□□□ -0.44
MARF1-205	ENST00000548025	PRKRIP1	Q9H875	184 aa	Predicted RBP	12.27	□□□□□ -0.44
MARF1-205	ENST00000548025	MLXIP	Q9HAP2	919 aa		12.27	□□□□□ -0.44
MARF1-205	ENST00000548025	ZBED9	Q6R2W3	1325 aa		12.27	□□□□□ -0.44
MARF1-205	ENST00000548025	RARS	P54136	660 aa	Known RBP	12.27	□□□□□ -0.44
MARF1-205	ENST00000548025	IFT74	Q96LB3	600 aa		12.27	□□□□□ -0.44
MARF1-205	ENST00000548025	XDH	P47989	1333 aa		12.27	□□□□□ -0.45
MARF1-205	ENST00000548025	MARCKS	P29966	332 aa	Predicted RBP	12.27	□□□□□ -0.45
MARF1-205	ENST00000548025	SYNC	Q9H7C4	482 aa		12.27	□□□□□ -0.45
MARF1-205	ENST00000548025	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	12.27	□□□□□ -0.45	3e-7	■■■□□ 15.3
MARF1-205	ENST00000548025	CAST	P20810	708 aa	Known RBP	12.27	□□□□□ -0.45
MARF1-205	ENST00000548025	FASTKD5	Q7L8L6	764 aa	Known RBP	12.27	□□□□□ -0.45
MARF1-205	ENST00000548025	CHD1	O14646	1710 aa		12.27	□□□□□ -0.45
MARF1-205	ENST00000548025	USPL1	Q5W0Q7	1092 aa		12.27	□□□□□ -0.45
MARF1-205	ENST00000548025	HOMER1	Q86YM7	354 aa		12.27	□□□□□ -0.45
MARF1-205	ENST00000548025	DEF6	Q9H4E7	631 aa		12.27	□□□□□ -0.45
MARF1-205	ENST00000548025	MAP3K1	Q13233	1512 aa		12.27	□□□□□ -0.45
MARF1-205	ENST00000548025	CCDC172	P0C7W6	258 aa		12.26	□□□□□ -0.45
MARF1-205	ENST00000548025	ANKRD35	Q8N283	1001 aa		12.26	□□□□□ -0.45
MARF1-205	ENST00000548025	SAMD9	Q5K651	1589 aa		12.26	□□□□□ -0.45
MARF1-205	ENST00000548025	RIMBP3C	A6NJZ7	1639 aa		12.26	□□□□□ -0.45
MARF1-205	ENST00000548025	RIMBP3B	A6NNM3	1639 aa		12.26	□□□□□ -0.45
MARF1-205	ENST00000548025	RIMBP3	Q9UFD9	1639 aa		12.26	□□□□□ -0.45
MARF1-205	ENST00000548025	UTP14C	Q5TAP6	766 aa	Known RBP	12.26	□□□□□ -0.45
MARF1-205	ENST00000548025	RUFY4	Q6ZNE9	571 aa		12.26	□□□□□ -0.45
MARF1-205	ENST00000548025	USP40	Q9NVE5	1235 aa		12.26	□□□□□ -0.45
MARF1-205	ENST00000548025	KRT26	Q7Z3Y9	468 aa		12.26	□□□□□ -0.45
MARF1-205	ENST00000548025	SLU7	O95391	586 aa	Known RBP	12.26	□□□□□ -0.45
MARF1-205	ENST00000548025	KRT13	P13646	458 aa		12.26	□□□□□ -0.45
MARF1-205	ENST00000548025	TMEM67	Q5HYA8	995 aa		12.26	□□□□□ -0.45
MARF1-205	ENST00000548025	HINFP	Q9BQA5	517 aa		12.26	□□□□□ -0.45
MARF1-205	ENST00000548025	COL17A1	Q9UMD9	1497 aa	Predicted RBP	12.26	□□□□□ -0.45
MARF1-205	ENST00000548025	PLEKHG3	A1L390	1219 aa		12.26	□□□□□ -0.45
MARF1-205	ENST00000548025	TFRC	P02786	760 aa	Known RBP	12.26	□□□□□ -0.45
MARF1-205	ENST00000548025	ANGEL1	Q9UNK9	670 aa	Known RBP	12.26	□□□□□ -0.45
MARF1-205	ENST00000548025	TTLL5	Q6EMB2	1281 aa		12.25	□□□□□ -0.45
MARF1-205	ENST00000548025	GTF2I	P78347	998 aa		12.25	□□□□□ -0.45
MARF1-205	ENST00000548025	EIF2AK4	Q9P2K8	1649 aa	Known RBP	12.25	□□□□□ -0.45
MARF1-205	ENST00000548025	PARP1	P09874	1014 aa	Known RBP	12.25	□□□□□ -0.45
MARF1-205	ENST00000548025	GPS2	Q13227	327 aa		12.25	□□□□□ -0.45
MARF1-205	ENST00000548025	ERBB4	Q15303	1308 aa		12.25	□□□□□ -0.45
MARF1-205	ENST00000548025	EDC4	Q6P2E9	1401 aa	Known RBP	12.25	□□□□□ -0.45
MARF1-205	ENST00000548025	ZSCAN20	P17040	1043 aa	Predicted RBP	12.25	□□□□□ -0.45
MARF1-205	ENST00000548025	GNA11	P29992	359 aa		12.25	□□□□□ -0.45
MARF1-205	ENST00000548025	NUDT18	Q6ZVK8	323 aa		12.25	□□□□□ -0.45
MARF1-205	ENST00000548025	NCOA7	Q8NI08	942 aa		12.25	□□□□□ -0.45
MARF1-205	ENST00000548025	LNPK	Q9C0E8	428 aa		12.25	□□□□□ -0.45
MARF1-205	ENST00000548025	PRDM5	Q9NQX1	630 aa	Predicted RBP	12.25	□□□□□ -0.45
MARF1-205	ENST00000548025	EIF4E1B	A6NMX2	242 aa	Known RBP	12.24	□□□□□ -0.45
MARF1-205	ENST00000548025	TCP10L2	B9ZVM9	353 aa		12.24	□□□□□ -0.45
MARF1-205	ENST00000548025	BMP15	O95972	392 aa		12.24	□□□□□ -0.45
MARF1-205	ENST00000548025	VEGFA	P15692	232 aa	Predicted RBP	12.24	□□□□□ -0.45
MARF1-205	ENST00000548025	FAM160B1	Q5W0V3	765 aa		12.24	□□□□□ -0.45
MARF1-205	ENST00000548025	KIAA1841	Q6NSI8	718 aa		12.24	□□□□□ -0.45
MARF1-205	ENST00000548025	WTAP	Q15007	396 aa		12.24	□□□□□ -0.45
MARF1-205	ENST00000548025	ZNF790	Q6PG37	636 aa		12.24	□□□□□ -0.45
MARF1-205	ENST00000548025	CCDC102A	Q96A19	550 aa		12.24	□□□□□ -0.45
MARF1-205	ENST00000548025	EVI5L	Q96CN4	794 aa		12.24	□□□□□ -0.45
MARF1-205	ENST00000548025	SKOR2	Q2VWA4	1001 aa	Predicted RBP	12.24	□□□□□ -0.45
MARF1-205	ENST00000548025	JPH2	Q9BR39	696 aa	Predicted RBP	12.24	□□□□□ -0.45
MARF1-205	ENST00000548025	HECW2	Q9P2P5	1572 aa		12.24	□□□□□ -0.45
MARF1-205	ENST00000548025	PARD3	Q8TEW0	1356 aa		12.24	□□□□□ -0.45
MARF1-205	ENST00000548025	KIAA0232	Q92628	1395 aa		12.24	□□□□□ -0.45
MARF1-205	ENST00000548025	USP17L3	A6NCW0	530 aa		12.24	□□□□□ -0.45
MARF1-205	ENST00000548025	USP17L4	A6NCW7	530 aa		12.24	□□□□□ -0.45
MARF1-205	ENST00000548025	DDX11L8	A8MPP1	907 aa		12.24	□□□□□ -0.45
MARF1-205	ENST00000548025	VIM	P08670	466 aa	Known RBP	12.24	□□□□□ -0.45
MARF1-205	ENST00000548025	USP17L1	Q7RTZ2	530 aa		12.24	□□□□□ -0.45
MARF1-205	ENST00000548025	GRM8	O00222	908 aa		12.24	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms