RNA–Protein interactions for RNA: ENST00000547905.5

RACGAP1-209, Transcript of Rac GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACGAP1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-209ENST00000547905 USP17L4A6NCW7 530 aa12.12□□□□□ -0.47
RACGAP1-209ENST00000547905 WTIPA6NIX2 430 aaPredicted RBP12.12□□□□□ -0.47
RACGAP1-209ENST00000547905 ERICH6BQ5W0A0 696 aa12.12□□□□□ -0.47
RACGAP1-209ENST00000547905 USP17L1Q7RTZ2 530 aa12.12□□□□□ -0.47
RACGAP1-209ENST00000547905 TBC1D16Q8TBP0 767 aa12.12□□□□□ -0.47
RACGAP1-209ENST00000547905 RTF1Q92541 710 aaKnown RBP12.12□□□□□ -0.47
RACGAP1-209ENST00000547905 PANK3Q9H999 370 aa12.12□□□□□ -0.47
RACGAP1-209ENST00000547905 POLLQ9UGP5 575 aa12.12□□□□□ -0.47
RACGAP1-209ENST00000547905 EVI5O60447 810 aa12.12□□□□□ -0.47
RACGAP1-209ENST00000547905 HSP90B1P14625 803 aaKnown RBP12.12□□□□□ -0.47
RACGAP1-209ENST00000547905 OGFOD1Q8N543 542 aa12.12□□□□□ -0.47
RACGAP1-209ENST00000547905 ANGEL1Q9UNK9 670 aaKnown RBP12.12□□□□□ -0.47
RACGAP1-209ENST00000547905 SH3TC1Q8TE82 1336 aa12.12□□□□□ -0.47
RACGAP1-209ENST00000547905 HOXD11P31277 338 aaPredicted RBP12.11□□□□□ -0.47
RACGAP1-209ENST00000547905 UBXN2AP68543 259 aa12.11□□□□□ -0.47
RACGAP1-209ENST00000547905 TAF7Q15545 349 aaPredicted RBP12.11□□□□□ -0.47
RACGAP1-209ENST00000547905 SUPT20HL1Q3ZLR7 823 aa12.11□□□□□ -0.47
RACGAP1-209ENST00000547905 MRS2Q9HD23 443 aa12.11□□□□□ -0.47
RACGAP1-209ENST00000547905 KNSTRNQ9Y448 316 aa12.11□□□□□ -0.47
RACGAP1-209ENST00000547905 FARP2O94887 1054 aaPredicted RBP12.11□□□□□ -0.47
RACGAP1-209ENST00000547905 GPSM2P81274 684 aa12.11□□□□□ -0.47
RACGAP1-209ENST00000547905 MKRN3Q13064 507 aaKnown RBP12.11□□□□□ -0.47
RACGAP1-209ENST00000547905 RIMBP2O15034 1052 aa12.1□□□□□ -0.47
RACGAP1-209ENST00000547905 IREB2P48200 963 aaKnown RBP12.1□□□□□ -0.47
RACGAP1-209ENST00000547905 DOK7Q18PE1 504 aa12.1□□□□□ -0.47
RACGAP1-209ENST00000547905 TTLL7Q6ZT98 887 aa12.1□□□□□ -0.47
RACGAP1-209ENST00000547905 SLC51AQ86UW1 340 aa12.1□□□□□ -0.47
RACGAP1-209ENST00000547905 TRIM47Q96LD4 638 aa12.1□□□□□ -0.47
RACGAP1-209ENST00000547905 SYNGAP1Q96PV0 1343 aa12.09□□□□□ -0.47
RACGAP1-209ENST00000547905 TAF1P21675 1872 aa12.09□□□□□ -0.47
RACGAP1-209ENST00000547905 GTF2A2P52657 109 aa12.08□□□□□ -0.48
RACGAP1-209ENST00000547905 ANKRD13AQ8IZ07 590 aa12.08□□□□□ -0.48
RACGAP1-209ENST00000547905 ZBTB3Q9H5J0 574 aa12.08□□□□□ -0.48
RACGAP1-209ENST00000547905 KCNQ5Q9NR82 932 aa12.08□□□□□ -0.48
RACGAP1-209ENST00000547905 GGA1Q9UJY5 639 aa12.08□□□□□ -0.48
RACGAP1-209ENST00000547905 WNT10BO00744 389 aa12.08□□□□□ -0.48
RACGAP1-209ENST00000547905 NLRP10Q86W26 655 aa12.08□□□□□ -0.48
RACGAP1-209ENST00000547905 TDHQ8IZJ6 230 aa12.08□□□□□ -0.48
RACGAP1-209ENST00000547905 ZBED3Q96IU2 234 aaPredicted RBP12.08□□□□□ -0.48
RACGAP1-209ENST00000547905 LACTBP83111 547 aaPredicted RBP12.07□□□□□ -0.48
RACGAP1-209ENST00000547905 ANKLE1Q8NAG6 615 aa12.07□□□□□ -0.48
RACGAP1-209ENST00000547905 MTMR14Q8NCE2 650 aa12.07□□□□□ -0.48
RACGAP1-209ENST00000547905 STAP2Q9UGK3 403 aa12.07□□□□□ -0.48
RACGAP1-209ENST00000547905 SCN9AQ15858 1988 aa12.07□□□□□ -0.48
RACGAP1-209ENST00000547905 ZNF804BA4D1E1 1349 aa12.07□□□□□ -0.48
RACGAP1-209ENST00000547905 COL3A1P02461 1466 aaPredicted RBP12.07□□□□□ -0.48
RACGAP1-209ENST00000547905 CCL5P13501 91 aa12.06□□□□□ -0.48
RACGAP1-209ENST00000547905 ATP2B4P23634 1241 aa12.06□□□□□ -0.48
RACGAP1-209ENST00000547905 RPS8P62241 208 aaKnown RBP12.06□□□□□ -0.48
RACGAP1-209ENST00000547905 TAF1CQ15572 869 aaPredicted RBP12.06□□□□□ -0.48
RACGAP1-209ENST00000547905 SRRDQ9UH36 339 aa12.06□□□□□ -0.48
RACGAP1-209ENST00000547905 STRIP1Q5VSL9 837 aa12.06□□□□□ -0.48
RACGAP1-209ENST00000547905 SH3TC2Q8TF17 1288 aa12.06□□□□□ -0.48
RACGAP1-209ENST00000547905 PTPN18Q99952 460 aa12.06□□□□□ -0.48
RACGAP1-209ENST00000547905 TLR2O60603 784 aa12.05□□□□□ -0.48
RACGAP1-209ENST00000547905 SGPL1O95470 568 aa12.05□□□□□ -0.48
RACGAP1-209ENST00000547905 GRK4P32298 578 aa12.05□□□□□ -0.48
RACGAP1-209ENST00000547905 NBPF9Q3BBW0 867 aa12.05□□□□□ -0.48
RACGAP1-209ENST00000547905 SLAIN1Q8ND83 568 aa12.05□□□□□ -0.48
RACGAP1-209ENST00000547905 TRMT112Q9UI30 125 aaKnown RBP12.05□□□□□ -0.48
RACGAP1-209ENST00000547905 HCLS1P14317 486 aaPredicted RBP12.05□□□□□ -0.48
RACGAP1-209ENST00000547905 FAM9BQ8IZU0 186 aa12.05□□□□□ -0.48
RACGAP1-209ENST00000547905 MS4A4AQ96JQ5 239 aa12.05□□□□□ -0.48
RACGAP1-209ENST00000547905 RRP7AQ9Y3A4 280 aaKnown RBP12.05□□□□□ -0.48
RACGAP1-209ENST00000547905 POTEB2H3BUK9 544 aa12.04□□□□□ -0.48
RACGAP1-209ENST00000547905 TNFRSF10AO00220 468 aa12.04□□□□□ -0.48
RACGAP1-209ENST00000547905 AMER1Q5JTC6 1135 aaPredicted RBP12.04□□□□□ -0.48
RACGAP1-209ENST00000547905 U2AF1L4Q8WU68 220 aaKnown RBP12.04□□□□□ -0.48
RACGAP1-209ENST00000547905 UFL1O94874 794 aa12.03□□□□□ -0.48
RACGAP1-209ENST00000547905 CAP1Q01518 475 aa12.03□□□□□ -0.48
RACGAP1-209ENST00000547905 NGEFQ8N5V2 710 aa12.03□□□□□ -0.48
RACGAP1-209ENST00000547905 COL2A1P02458 1487 aaPredicted RBP12.03□□□□□ -0.48
RACGAP1-209ENST00000547905 MED23Q9ULK4 1368 aa12.03□□□□□ -0.48
RACGAP1-209ENST00000547905 EIF4A1P60842 406 aaKnown RBP12.03□□□□□ -0.48
RACGAP1-209ENST00000547905 DACT2Q5SW24 774 aa12.03□□□□□ -0.48
RACGAP1-209ENST00000547905 PRAMEF18Q5VWM3 479 aa12.03□□□□□ -0.48
RACGAP1-209ENST00000547905 CELF1Q92879 486 aaKnown RBP12.03□□□□□ -0.48
RACGAP1-209ENST00000547905 DEFB129Q9H1M3 183 aa12.03□□□□□ -0.48
RACGAP1-209ENST00000547905 XDHP47989 1333 aa12.03□□□□□ -0.48
RACGAP1-209ENST00000547905 RAET1EQ8TD07 263 aa12.02□□□□□ -0.48
RACGAP1-209ENST00000547905 RNF208Q9H0X6 261 aa12.02□□□□□ -0.48
RACGAP1-209ENST00000547905 ADGRA2Q96PE1 1338 aa12.02□□□□□ -0.49
RACGAP1-209ENST00000547905 CETPP11597 493 aa12.02□□□□□ -0.49
RACGAP1-209ENST00000547905 GJA5P36382 358 aa12.02□□□□□ -0.49
RACGAP1-209ENST00000547905 BCAMP50895 628 aa12.02□□□□□ -0.49
RACGAP1-209ENST00000547905 MTFR1Q15390 333 aa12.02□□□□□ -0.49
RACGAP1-209ENST00000547905 Q7L0L9 218 aa12.02□□□□□ -0.49
RACGAP1-209ENST00000547905 LRP10Q7Z4F1 713 aa12.02□□□□□ -0.49
RACGAP1-209ENST00000547905 NECAB2Q7Z6G3 386 aa12.02□□□□□ -0.49
RACGAP1-209ENST00000547905 COA1Q9GZY4 146 aa12.02□□□□□ -0.49
RACGAP1-209ENST00000547905 CRISPLD2Q9H0B8 497 aa12.02□□□□□ -0.49
RACGAP1-209ENST00000547905 RSPH6AQ9H0K4 717 aa12.02□□□□□ -0.49
RACGAP1-209ENST00000547905 RIPOR2Q9Y4F9 1068 aa12.02□□□□□ -0.49
RACGAP1-209ENST00000547905 BABAM1Q9NWV8 329 aa12.01□□□□□ -0.49
RACGAP1-209ENST00000547905 MYL6BP14649 208 aa12.01□□□□□ -0.49
RACGAP1-209ENST00000547905 PXYLP1Q8TE99 480 aa12.01□□□□□ -0.49
RACGAP1-209ENST00000547905 BRI3BPQ8WY22 251 aa12.01□□□□□ -0.49
RACGAP1-209ENST00000547905 CLMNQ96JQ2 1002 aa12.01□□□□□ -0.49
RACGAP1-209ENST00000547905 ANKIB1Q9P2G1 1089 aa12.01□□□□□ -0.49
RACGAP1-209ENST00000547905 CCL15-CCL14A0A0B4J2E2 113 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms