RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 C15orf52Q6ZUT6 534 aaKnown RBP23.4■■□□□ 1.34
PRPF40B-206ENST00000547764 LDHDQ86WU2 507 aa23.4■■□□□ 1.34
PRPF40B-206ENST00000547764 GNAI2P04899 355 aa23.39■■□□□ 1.33
PRPF40B-206ENST00000547764 CHADLQ6NUI6 762 aa23.39■■□□□ 1.33
PRPF40B-206ENST00000547764 ITPRIPQ8IWB1 547 aa23.39■■□□□ 1.33
PRPF40B-206ENST00000547764 CNOT7Q9UIV1 285 aaKnown RBP23.39■■□□□ 1.33
PRPF40B-206ENST00000547764 EYA2O00167 538 aa23.38■■□□□ 1.33
PRPF40B-206ENST00000547764 HSPA6P17066 643 aa23.38■■□□□ 1.33
PRPF40B-206ENST00000547764 UBE4AQ14139 1066 aa23.38■■□□□ 1.33
PRPF40B-206ENST00000547764 METTL24Q5JXM2 366 aa23.38■■□□□ 1.33
PRPF40B-206ENST00000547764 PANK1Q8TE04 598 aa23.38■■□□□ 1.33
PRPF40B-206ENST00000547764 DPF2Q92785 391 aa23.38■■□□□ 1.33
PRPF40B-206ENST00000547764 SHTN1A0MZ66 631 aa23.37■■□□□ 1.33
PRPF40B-206ENST00000547764 USP17L3A6NCW0 530 aa23.37■■□□□ 1.33
PRPF40B-206ENST00000547764 USP17L4A6NCW7 530 aa23.37■■□□□ 1.33
PRPF40B-206ENST00000547764 RPS12P25398 132 aaKnown RBP23.37■■□□□ 1.33
PRPF40B-206ENST00000547764 USP50Q70EL3 339 aaPredicted RBP23.37■■□□□ 1.33
PRPF40B-206ENST00000547764 USP17L1Q7RTZ2 530 aa23.37■■□□□ 1.33
PRPF40B-206ENST00000547764 VGLL2Q8N8G2 317 aa23.37■■□□□ 1.33
PRPF40B-206ENST00000547764 ADARB2Q9NS39 739 aaKnown RBP23.37■■□□□ 1.33
PRPF40B-206ENST00000547764 CLEC11AQ9Y240 323 aa23.37■■□□□ 1.33
PRPF40B-206ENST00000547764 MTX1Q13505 466 aa23.36■■□□□ 1.33
PRPF40B-206ENST00000547764 RSBN1LQ6PCB5 846 aaPredicted RBP23.36■■□□□ 1.33
PRPF40B-206ENST00000547764 MICALL2Q8IY33 904 aa23.36■■□□□ 1.33
PRPF40B-206ENST00000547764 CD209Q9NNX6 404 aa23.36■■□□□ 1.33
PRPF40B-206ENST00000547764 H7C1D1 291 aa23.35■■□□□ 1.33
PRPF40B-206ENST00000547764 ZBTB7BO15156 539 aaPredicted RBP23.35■■□□□ 1.33
PRPF40B-206ENST00000547764 SRGAP3O43295 1099 aa23.35■■□□□ 1.33
PRPF40B-206ENST00000547764 PDE8BO95263 885 aa23.35■■□□□ 1.33
PRPF40B-206ENST00000547764 MS4A1P11836 297 aa23.35■■□□□ 1.33
PRPF40B-206ENST00000547764 ATG9AQ7Z3C6 839 aa23.35■■□□□ 1.33
PRPF40B-206ENST00000547764 SIL1Q9H173 461 aa23.35■■□□□ 1.33
PRPF40B-206ENST00000547764 FBXO3Q9UK99 471 aa23.35■■□□□ 1.33
PRPF40B-206ENST00000547764 PA2G4Q9UQ80 394 aaKnown RBP23.35■■□□□ 1.33
PRPF40B-206ENST00000547764 ADAMTSL1Q8N6G6 1762 aa23.35■■□□□ 1.33
PRPF40B-206ENST00000547764 PSME4Q14997 1843 aa23.34■■□□□ 1.33
PRPF40B-206ENST00000547764 ZNF804AQ7Z570 1209 aa23.34■■□□□ 1.33
PRPF40B-206ENST00000547764 AGBL3Q8NEM8 1001 aa23.34■■□□□ 1.33
PRPF40B-206ENST00000547764 COPRSQ9NQ92 184 aa23.34■■□□□ 1.33
PRPF40B-206ENST00000547764 CIAO1O76071 339 aa23.33■■□□□ 1.33
PRPF40B-206ENST00000547764 DACT2Q5SW24 774 aa23.33■■□□□ 1.33
PRPF40B-206ENST00000547764 STRIP1Q5VSL9 837 aa23.33■■□□□ 1.33
PRPF40B-206ENST00000547764 FBXW7Q969H0 707 aa23.33■■□□□ 1.33
PRPF40B-206ENST00000547764 GMLQ99445 158 aa23.33■■□□□ 1.33
PRPF40B-206ENST00000547764 IL1R1P14778 569 aa23.32■■□□□ 1.32
PRPF40B-206ENST00000547764 HIRAP54198 1017 aaPredicted RBP23.32■■□□□ 1.32
PRPF40B-206ENST00000547764 MAP1SQ66K74 1059 aaPredicted RBP23.32■■□□□ 1.32
PRPF40B-206ENST00000547764 TTLL5Q6EMB2 1281 aa23.32■■□□□ 1.32
PRPF40B-206ENST00000547764 TRPM4Q8TD43 1214 aa23.32■■□□□ 1.32
PRPF40B-206ENST00000547764 MXD3Q9BW11 206 aa23.32■■□□□ 1.32
PRPF40B-206ENST00000547764 ZNF609O15014 1411 aa23.32■■□□□ 1.32
PRPF40B-206ENST00000547764 PNMA6EA0A0J9YXQ4 647 aa23.31■■□□□ 1.32
PRPF40B-206ENST00000547764 GYG1P46976 350 aa23.31■■□□□ 1.32
PRPF40B-206ENST00000547764 GTF2IP78347 998 aa23.31■■□□□ 1.32
PRPF40B-206ENST00000547764 SAMD7Q7Z3H4 446 aa23.31■■□□□ 1.32
PRPF40B-206ENST00000547764 FAM84BQ96KN1 310 aaPredicted RBP23.31■■□□□ 1.32
PRPF40B-206ENST00000547764 C1orf115Q9H7X2 142 aa23.31■■□□□ 1.32
PRPF40B-206ENST00000547764 FGFR2P21802 821 aa23.3■■□□□ 1.32
PRPF40B-206ENST00000547764 HIBADHP31937 336 aaKnown RBP23.3■■□□□ 1.32
PRPF40B-206ENST00000547764 IL15P40933 162 aaPredicted RBP23.3■■□□□ 1.32
PRPF40B-206ENST00000547764 PUM3Q15397 648 aaKnown RBP23.3■■□□□ 1.32
PRPF40B-206ENST00000547764 CNTROBQ8N137 903 aa23.3■■□□□ 1.32
PRPF40B-206ENST00000547764 ITGBL1O95965 494 aaPredicted RBP23.29■■□□□ 1.32
PRPF40B-206ENST00000547764 EGFRP00533 1210 aa23.29■■□□□ 1.32
PRPF40B-206ENST00000547764 APLP1P51693 650 aa23.29■■□□□ 1.32
PRPF40B-206ENST00000547764 TBC1D10BQ4KMP7 808 aaPredicted RBP23.29■■□□□ 1.32
PRPF40B-206ENST00000547764 CEP126Q9P2H0 1117 aa23.29■■□□□ 1.32
PRPF40B-206ENST00000547764 ZNF646O15015 1829 aaPredicted RBP23.29■■□□□ 1.32
PRPF40B-206ENST00000547764 USP17L8P0C7I0 530 aa23.28■■□□□ 1.32
PRPF40B-206ENST00000547764 ZNF280AP59817 542 aaPredicted RBP23.28■■□□□ 1.32
PRPF40B-206ENST00000547764 ATP8B2P98198 1209 aa23.28■■□□□ 1.32
PRPF40B-206ENST00000547764 MVPQ14764 893 aaKnown RBP23.28■■□□□ 1.32
PRPF40B-206ENST00000547764 RBM26Q5T8P6 1007 aaKnown RBP23.28■■□□□ 1.32
PRPF40B-206ENST00000547764 FBXO33Q7Z6M2 555 aa23.28■■□□□ 1.32
PRPF40B-206ENST00000547764 COG6Q9Y2V7 657 aa23.28■■□□□ 1.32
PRPF40B-206ENST00000547764 MYO3BQ8WXR4 1341 aa23.28■■□□□ 1.32
PRPF40B-206ENST00000547764 IFIT1P09914 478 aaKnown RBP23.27■■□□□ 1.32
PRPF40B-206ENST00000547764 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.27■■□□□ 1.32
PRPF40B-206ENST00000547764 TDRD7Q8NHU6 1098 aaKnown RBP23.27■■□□□ 1.32
PRPF40B-206ENST00000547764 PGAP2Q9UHJ9 254 aa23.27■■□□□ 1.32
PRPF40B-206ENST00000547764 PASKQ96RG2 1323 aa23.27■■□□□ 1.32
PRPF40B-206ENST00000547764 SASH1O94885 1247 aa23.26■■□□□ 1.31
PRPF40B-206ENST00000547764 POLA2Q14181 598 aa23.26■■□□□ 1.31
PRPF40B-206ENST00000547764 CAVIN4Q5BKX8 364 aa23.26■■□□□ 1.31
PRPF40B-206ENST00000547764 VPS37DQ86XT2 251 aa23.26■■□□□ 1.31
PRPF40B-206ENST00000547764 ZC3H15Q8WU90 426 aaKnown RBP23.26■■□□□ 1.31
PRPF40B-206ENST00000547764 LPIN2Q92539 896 aa23.26■■□□□ 1.31
PRPF40B-206ENST00000547764 SLC5A1P13866 664 aa23.25■■□□□ 1.31
PRPF40B-206ENST00000547764 BCAMP50895 628 aa23.25■■□□□ 1.31
PRPF40B-206ENST00000547764 PDE3AQ14432 1141 aa23.25■■□□□ 1.31
PRPF40B-206ENST00000547764 KIF4BQ2VIQ3 1234 aa23.25■■□□□ 1.31
PRPF40B-206ENST00000547764 C20orf194Q5TEA3 1177 aa23.25■■□□□ 1.31
PRPF40B-206ENST00000547764 DDX19BQ9UMR2 479 aa23.25■■□□□ 1.31
PRPF40B-206ENST00000547764 JAG2Q9Y219 1238 aa23.25■■□□□ 1.31
PRPF40B-206ENST00000547764 HTRA3P83110 453 aa23.24■■□□□ 1.31
PRPF40B-206ENST00000547764 ATP2B3Q16720 1220 aa23.24■■□□□ 1.31
PRPF40B-206ENST00000547764 CERS5Q8N5B7 392 aa23.24■■□□□ 1.31
PRPF40B-206ENST00000547764 SSH3Q8TE77 659 aa23.24■■□□□ 1.31
PRPF40B-206ENST00000547764 MYOZ2Q9NPC6 264 aa23.24■■□□□ 1.31
PRPF40B-206ENST00000547764 KIAA0825Q8IV33 1275 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms