RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 DBF4Q9UBU7 674 aaPredicted RBP17.55■□□□□ 0.4
CCDC59-202ENST00000547758 SCAF8Q9UPN6 1271 aaKnown RBP17.55■□□□□ 0.4
CCDC59-202ENST00000547758 HOXB7P09629 217 aa17.54■□□□□ 0.4
CCDC59-202ENST00000547758 TM4SF4P48230 202 aa17.54■□□□□ 0.4
CCDC59-202ENST00000547758 GCC1Q96CN9 775 aa17.54■□□□□ 0.4
CCDC59-202ENST00000547758 CENPFP49454 3210 aa17.54■□□□□ 0.4
CCDC59-202ENST00000547758 HTTP42858 3142 aa17.54■□□□□ 0.4
CCDC59-202ENST00000547758 RBBP6Q7Z6E9 1792 aaKnown RBP17.53■□□□□ 0.4
CCDC59-202ENST00000547758 GABBR2O75899 941 aa17.53■□□□□ 0.4
CCDC59-202ENST00000547758 TTLL12Q14166 644 aaPredicted RBP17.53■□□□□ 0.4
CCDC59-202ENST00000547758 ZBTB38Q8NAP3 1195 aaPredicted RBP17.53■□□□□ 0.4
CCDC59-202ENST00000547758 HYPKQ9NX55 129 aa17.53■□□□□ 0.4
CCDC59-202ENST00000547758 LAS1LQ9Y4W2 734 aaKnown RBP17.53■□□□□ 0.4
CCDC59-202ENST00000547758 KIAA0100Q14667 2235 aaKnown RBP17.53■□□□□ 0.4
CCDC59-202ENST00000547758 LAMB1P07942 1786 aa17.53■□□□□ 0.4
CCDC59-202ENST00000547758 XDHP47989 1333 aa17.52■□□□□ 0.4
CCDC59-202ENST00000547758 USP17L3A6NCW0 530 aa17.52■□□□□ 0.4
CCDC59-202ENST00000547758 USP17L4A6NCW7 530 aa17.52■□□□□ 0.4
CCDC59-202ENST00000547758 HSP90B1P14625 803 aaKnown RBP17.52■□□□□ 0.4
CCDC59-202ENST00000547758 PRAMEF18Q5VWM3 479 aa17.52■□□□□ 0.4
CCDC59-202ENST00000547758 USP17L1Q7RTZ2 530 aa17.52■□□□□ 0.4
CCDC59-202ENST00000547758 SREBF2Q12772 1141 aa17.51■□□□□ 0.39
CCDC59-202ENST00000547758 MKRN3Q13064 507 aaKnown RBP17.51■□□□□ 0.39
CCDC59-202ENST00000547758 NBPF9Q3BBW0 867 aa17.51■□□□□ 0.39
CCDC59-202ENST00000547758 CCDC152Q4G0S7 254 aa17.51■□□□□ 0.39
CCDC59-202ENST00000547758 PODNQ7Z5L7 613 aa17.51■□□□□ 0.39
CCDC59-202ENST00000547758 BRCA2P51587 3418 aa17.5■□□□□ 0.39
CCDC59-202ENST00000547758 FKTNO75072 461 aa17.5■□□□□ 0.39
CCDC59-202ENST00000547758 NF2P35240 595 aa17.5■□□□□ 0.39
CCDC59-202ENST00000547758 NEUROD2Q15784 382 aa17.5■□□□□ 0.39
CCDC59-202ENST00000547758 CFHR5Q9BXR6 569 aa17.5■□□□□ 0.39
CCDC59-202ENST00000547758 FARP1Q9Y4F1 1045 aaPredicted RBP17.5■□□□□ 0.39
CCDC59-202ENST00000547758 ATP2B4P23634 1241 aa17.49■□□□□ 0.39
CCDC59-202ENST00000547758 RIC3Q7Z5B4 369 aa17.49■□□□□ 0.39
CCDC59-202ENST00000547758 ECM29Q5VYK3 1845 aa17.49■□□□□ 0.39
CCDC59-202ENST00000547758 PDE8AO60658 829 aa17.48■□□□□ 0.39
CCDC59-202ENST00000547758 GOLGA2Q08379 1002 aa17.48■□□□□ 0.39
CCDC59-202ENST00000547758 ANKRD18AQ8IVF6 992 aa17.48■□□□□ 0.39
CCDC59-202ENST00000547758 CCDC85AQ96PX6 553 aaPredicted RBP17.48■□□□□ 0.39
CCDC59-202ENST00000547758 R3HDMLQ9H3Y0 253 aa17.48■□□□□ 0.39
CCDC59-202ENST00000547758 WNT10BO00744 389 aa17.47■□□□□ 0.39
CCDC59-202ENST00000547758 PCCAP05165 728 aaPredicted RBP17.47■□□□□ 0.39
CCDC59-202ENST00000547758 DUSP27Q5VZP5 1158 aa17.47■□□□□ 0.39
CCDC59-202ENST00000547758 OGFOD1Q8N543 542 aa17.47■□□□□ 0.39
CCDC59-202ENST00000547758 TRIM35Q9UPQ4 493 aa17.47■□□□□ 0.39
CCDC59-202ENST00000547758 MED23Q9ULK4 1368 aa17.47■□□□□ 0.39
CCDC59-202ENST00000547758 PTPN12Q05209 780 aaKnown RBP17.46■□□□□ 0.39
CCDC59-202ENST00000547758 HABP4Q5JVS0 413 aaKnown RBP17.46■□□□□ 0.39
CCDC59-202ENST00000547758 DACT2Q5SW24 774 aa17.46■□□□□ 0.39
CCDC59-202ENST00000547758 ARMC9Q7Z3E5 817 aa17.46■□□□□ 0.39
CCDC59-202ENST00000547758 CCDC146Q8IYE0 955 aa17.46■□□□□ 0.39
CCDC59-202ENST00000547758 CCDC191Q8NCU4 936 aa17.46■□□□□ 0.39
CCDC59-202ENST00000547758 MYD88Q99836 296 aa17.46■□□□□ 0.39
CCDC59-202ENST00000547758 MXD3Q9BW11 206 aa17.46■□□□□ 0.39
CCDC59-202ENST00000547758 MYO3BQ8WXR4 1341 aa17.46■□□□□ 0.38
CCDC59-202ENST00000547758 ALDH1A1P00352 501 aa17.45■□□□□ 0.38
CCDC59-202ENST00000547758 JARID2Q92833 1246 aaPredicted RBP17.45■□□□□ 0.38
CCDC59-202ENST00000547758 FBXW7Q969H0 707 aa17.45■□□□□ 0.38
CCDC59-202ENST00000547758 WTIPA6NIX2 430 aaPredicted RBP17.44■□□□□ 0.38
CCDC59-202ENST00000547758 SASH1O94885 1247 aa17.44■□□□□ 0.38
CCDC59-202ENST00000547758 PRKG1Q13976 671 aa17.44■□□□□ 0.38
CCDC59-202ENST00000547758 SPRYD7Q5W111 196 aa17.44■□□□□ 0.38
CCDC59-202ENST00000547758 APOBEC3FQ8IUX4 373 aaKnown RBP17.44■□□□□ 0.38
CCDC59-202ENST00000547758 CDC5LQ99459 802 aaKnown RBP17.44■□□□□ 0.38
CCDC59-202ENST00000547758 PHAXQ9H814 394 aaKnown RBP17.44■□□□□ 0.38
CCDC59-202ENST00000547758 CWC25Q9NXE8 425 aaPredicted RBP17.44■□□□□ 0.38
CCDC59-202ENST00000547758 SPDYE4A6NLX3 237 aa17.43■□□□□ 0.38
CCDC59-202ENST00000547758 CD44P16070 742 aaKnown RBP17.43■□□□□ 0.38
CCDC59-202ENST00000547758 LDLRAD1Q5T700 205 aa17.43■□□□□ 0.38
CCDC59-202ENST00000547758 STRIP1Q5VSL9 837 aa17.43■□□□□ 0.38
CCDC59-202ENST00000547758 INTS3Q68E01 1043 aaKnown RBP17.43■□□□□ 0.38
CCDC59-202ENST00000547758 TRIM17Q9Y577 477 aa17.43■□□□□ 0.38
CCDC59-202ENST00000547758 COL1A1P02452 1464 aaPredicted RBP17.43■□□□□ 0.38
CCDC59-202ENST00000547758 POTEFA5A3E0 1075 aa17.42■□□□□ 0.38
CCDC59-202ENST00000547758 MMP14P50281 582 aa17.42■□□□□ 0.38
CCDC59-202ENST00000547758 OTOP1Q7RTM1 612 aa17.42■□□□□ 0.38
CCDC59-202ENST00000547758 RUNDC1Q96C34 613 aa17.42■□□□□ 0.38
CCDC59-202ENST00000547758 ANGEL1Q9UNK9 670 aaKnown RBP17.42■□□□□ 0.38
CCDC59-202ENST00000547758 MINPP1Q9UNW1 487 aa17.42■□□□□ 0.38
CCDC59-202ENST00000547758 MANSC4A6NHS7 340 aaPredicted RBP17.41■□□□□ 0.38
CCDC59-202ENST00000547758 CCT4P50991 539 aaKnown RBP17.41■□□□□ 0.38
CCDC59-202ENST00000547758 CTSWP56202 376 aa17.41■□□□□ 0.38
CCDC59-202ENST00000547758 IFNL1Q8IU54 200 aa17.41■□□□□ 0.38
CCDC59-202ENST00000547758 COA1Q9GZY4 146 aa17.41■□□□□ 0.38
CCDC59-202ENST00000547758 MBIPQ9NS73 344 aa17.41■□□□□ 0.38
CCDC59-202ENST00000547758 BSDC1Q9NW68 430 aaPredicted RBP17.41■□□□□ 0.38
CCDC59-202ENST00000547758 CEP290O15078 2479 aa17.4■□□□□ 0.38
CCDC59-202ENST00000547758 INHBEP58166 350 aa17.4■□□□□ 0.38
CCDC59-202ENST00000547758 RALBP1Q15311 655 aa17.4■□□□□ 0.38
CCDC59-202ENST00000547758 METTL22Q9BUU2 404 aaPredicted RBP17.4■□□□□ 0.38
CCDC59-202ENST00000547758 OTOFQ9HC10 1997 aa17.39■□□□□ 0.37
CCDC59-202ENST00000547758 ZBTB48P10074 688 aaPredicted RBP17.39■□□□□ 0.37
CCDC59-202ENST00000547758 KIAA0825Q8IV33 1275 aa17.39■□□□□ 0.37
CCDC59-202ENST00000547758 FZD1Q9UP38 647 aa17.39■□□□□ 0.37
CCDC59-202ENST00000547758 SSC5DA1L4H1 1573 aa17.38■□□□□ 0.37
CCDC59-202ENST00000547758 IGF2BP3O00425 579 aaKnown RBP eCLIP17.38■□□□□ 0.37
CCDC59-202ENST00000547758 TTLL5Q6EMB2 1281 aa17.38■□□□□ 0.37
CCDC59-202ENST00000547758 TXNRD3Q86VQ6 643 aa17.38■□□□□ 0.37
CCDC59-202ENST00000547758 TTLL11Q8NHH1 800 aa17.38■□□□□ 0.37
CCDC59-202ENST00000547758 SLC10A4Q96EP9 437 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms