RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 TTC41PQ6P2S7 1318 aa20.03■□□□□ 0.8
CHMP1A-204ENST00000547687 HSP90AA1P07900 732 aaKnown RBP20.03■□□□□ 0.8
CHMP1A-204ENST00000547687 CRAMP1Q96RY5 1269 aa20.03■□□□□ 0.8
CHMP1A-204ENST00000547687 CCDC8Q9H0W5 538 aaPredicted RBP20.03■□□□□ 0.8
CHMP1A-204ENST00000547687 PDE8AO60658 829 aa20.02■□□□□ 0.8
CHMP1A-204ENST00000547687 MAP4K4O95819 1239 aaPredicted RBP20.02■□□□□ 0.8
CHMP1A-204ENST00000547687 CTSWP56202 376 aa20.02■□□□□ 0.8
CHMP1A-204ENST00000547687 ATG9AQ7Z3C6 839 aa20.02■□□□□ 0.8
CHMP1A-204ENST00000547687 RRAGCQ9HB90 399 aa20.02■□□□□ 0.8
CHMP1A-204ENST00000547687 LTBP3Q9NS15 1303 aa20.02■□□□□ 0.8
CHMP1A-204ENST00000547687 FKBP4Q02790 459 aaKnown RBP eCLIP20.02■□□□□ 0.79
CHMP1A-204ENST00000547687 SNED1Q8TER0 1413 aa20.01■□□□□ 0.79
CHMP1A-204ENST00000547687 GLRX3O76003 335 aaKnown RBP20.01■□□□□ 0.79
CHMP1A-204ENST00000547687 IFIT5Q13325 482 aaKnown RBP20.01■□□□□ 0.79
CHMP1A-204ENST00000547687 LRRC24Q50LG9 513 aa20.01■□□□□ 0.79
CHMP1A-204ENST00000547687 CNTROBQ8N137 903 aa20.01■□□□□ 0.79
CHMP1A-204ENST00000547687 PUS3Q9BZE2 481 aaKnown RBP20.01■□□□□ 0.79
CHMP1A-204ENST00000547687 TLR7Q9NYK1 1049 aaKnown RBP20.01■□□□□ 0.79
CHMP1A-204ENST00000547687 EYA2O00167 538 aa20■□□□□ 0.79
CHMP1A-204ENST00000547687 RTKN2Q8IZC4 609 aa20■□□□□ 0.79
CHMP1A-204ENST00000547687 GREM2Q9H772 168 aa20■□□□□ 0.79
CHMP1A-204ENST00000547687 ECHDC1Q9NTX5 307 aa20■□□□□ 0.79
CHMP1A-204ENST00000547687 CIZ1Q9ULV3 898 aaPredicted RBP20■□□□□ 0.79
CHMP1A-204ENST00000547687 MCCP23508 829 aa20■□□□□ 0.79
CHMP1A-204ENST00000547687 TNNI3KQ59H18 835 aa20■□□□□ 0.79
CHMP1A-204ENST00000547687 DDX46Q7L014 1031 aaKnown RBP20■□□□□ 0.79
CHMP1A-204ENST00000547687 GPATCH3Q96I76 525 aa20■□□□□ 0.79
CHMP1A-204ENST00000547687 ANO2Q9NQ90 1003 aa20■□□□□ 0.79
CHMP1A-204ENST00000547687 FPGT-TNNI3KV9GXZ4 949 aa20■□□□□ 0.79
CHMP1A-204ENST00000547687 ST18O60284 1047 aa19.99■□□□□ 0.79
CHMP1A-204ENST00000547687 ITGA6P23229 1130 aa19.99■□□□□ 0.79
CHMP1A-204ENST00000547687 IL15P40933 162 aaPredicted RBP19.99■□□□□ 0.79
CHMP1A-204ENST00000547687 GSE1Q14687 1217 aa19.99■□□□□ 0.79
CHMP1A-204ENST00000547687 COL4A5P29400 1685 aa19.99■□□□□ 0.79
CHMP1A-204ENST00000547687 GLTPD2A6NH11 291 aa19.98■□□□□ 0.79
CHMP1A-204ENST00000547687 CIAO1O76071 339 aa19.98■□□□□ 0.79
CHMP1A-204ENST00000547687 FOXD4L1Q9NU39 408 aa19.98■□□□□ 0.79
CHMP1A-204ENST00000547687 TAF7LQ5H9L4 462 aa19.98■□□□□ 0.79
CHMP1A-204ENST00000547687 CELF1Q92879 486 aaKnown RBP19.98■□□□□ 0.79
CHMP1A-204ENST00000547687 AK9Q5TCS8 1911 aa19.98■□□□□ 0.79
CHMP1A-204ENST00000547687 SPEF2Q9C093 1822 aa19.97■□□□□ 0.79
CHMP1A-204ENST00000547687 ANKRD18BA2A2Z9 1011 aa19.97■□□□□ 0.79
CHMP1A-204ENST00000547687 EPB41L2O43491 1005 aaKnown RBP19.97■□□□□ 0.79
CHMP1A-204ENST00000547687 GRAPQ13588 217 aa19.97■□□□□ 0.79
CHMP1A-204ENST00000547687 GRAPLQ8TC17 118 aaPredicted RBP19.97■□□□□ 0.79
CHMP1A-204ENST00000547687 DBNLQ9UJU6 430 aaKnown RBP19.97■□□□□ 0.79
CHMP1A-204ENST00000547687 ATP6V0A2Q9Y487 856 aa19.97■□□□□ 0.79
CHMP1A-204ENST00000547687 ZC3H4Q9UPT8 1303 aaKnown RBP19.96■□□□□ 0.79
CHMP1A-204ENST00000547687 DDNO94850 711 aaPredicted RBP19.96■□□□□ 0.79
CHMP1A-204ENST00000547687 MCM4P33991 863 aa19.96■□□□□ 0.79
CHMP1A-204ENST00000547687 IARSP41252 1262 aaKnown RBP19.96■□□□□ 0.79
CHMP1A-204ENST00000547687 SEC31BQ9NQW1 1179 aa19.96■□□□□ 0.79
CHMP1A-204ENST00000547687 FBXO3Q9UK99 471 aa19.96■□□□□ 0.79
CHMP1A-204ENST00000547687 ZNF541Q9H0D2 1346 aa19.95■□□□□ 0.78
CHMP1A-204ENST00000547687 ANAPC15P60006 121 aa19.95■□□□□ 0.78
CHMP1A-204ENST00000547687 SF3B3Q15393 1217 aaKnown RBP19.95■□□□□ 0.78
CHMP1A-204ENST00000547687 PSMD1Q99460 953 aa19.95■□□□□ 0.78
CHMP1A-204ENST00000547687 LDHAL6AQ6ZMR3 332 aa19.94■□□□□ 0.78
CHMP1A-204ENST00000547687 DBNDD2Q9BQY9 259 aa19.94■□□□□ 0.78
CHMP1A-204ENST00000547687 IL25Q9H293 177 aa19.94■□□□□ 0.78
CHMP1A-204ENST00000547687 PCNTO95613 3336 aa19.94■□□□□ 0.78
CHMP1A-204ENST00000547687 SGSM2O43147 1006 aa19.93■□□□□ 0.78
CHMP1A-204ENST00000547687 BBOX1O75936 387 aa19.93■□□□□ 0.78
CHMP1A-204ENST00000547687 TIMM10P62072 90 aa19.93■□□□□ 0.78
CHMP1A-204ENST00000547687 DPY19L2Q6NUT2 758 aa19.93■□□□□ 0.78
CHMP1A-204ENST00000547687 GPR108Q9NPR9 543 aa19.93■□□□□ 0.78
CHMP1A-204ENST00000547687 CEP126Q9P2H0 1117 aa19.93■□□□□ 0.78
CHMP1A-204ENST00000547687 LRRC37AA6NMS7 1700 aa19.93■□□□□ 0.78
CHMP1A-204ENST00000547687 POTECB2RU33 542 aa19.93■□□□□ 0.78
CHMP1A-204ENST00000547687 HSP90B1P14625 803 aaKnown RBP19.93■□□□□ 0.78
CHMP1A-204ENST00000547687 CC2D2BQ6DHV5 1058 aa19.93■□□□□ 0.78
CHMP1A-204ENST00000547687 NEUROD6Q96NK8 337 aa19.93■□□□□ 0.78
CHMP1A-204ENST00000547687 PALD1Q9ULE6 856 aa19.93■□□□□ 0.78
CHMP1A-204ENST00000547687 WDR90Q96KV7 1748 aa19.93■□□□□ 0.78
CHMP1A-204ENST00000547687 NEK4P51957 841 aa19.92■□□□□ 0.78
CHMP1A-204ENST00000547687 RAB3GAP1Q15042 981 aa19.92■□□□□ 0.78
CHMP1A-204ENST00000547687 AOC3Q16853 763 aa19.92■□□□□ 0.78
CHMP1A-204ENST00000547687 SP8Q8IXZ3 490 aa19.92■□□□□ 0.78
CHMP1A-204ENST00000547687 TMX4Q9H1E5 349 aaPredicted RBP19.92■□□□□ 0.78
CHMP1A-204ENST00000547687 BOLA2Q9H3K6 86 aa19.92■□□□□ 0.78
CHMP1A-204ENST00000547687 RIPOR2Q9Y4F9 1068 aa19.92■□□□□ 0.78
CHMP1A-204ENST00000547687 DPP8Q6V1X1 898 aaPredicted RBP19.92■□□□□ 0.78
CHMP1A-204ENST00000547687 LARGE2Q8N3Y3 721 aa19.92■□□□□ 0.78
CHMP1A-204ENST00000547687 EVI5LQ96CN4 794 aa19.92■□□□□ 0.78
CHMP1A-204ENST00000547687 TOMM70O94826 608 aa19.91■□□□□ 0.78
CHMP1A-204ENST00000547687 CCDC152Q4G0S7 254 aa19.91■□□□□ 0.78
CHMP1A-204ENST00000547687 CWC27Q6UX04 472 aaKnown RBP19.91■□□□□ 0.78
CHMP1A-204ENST00000547687 TNPO1Q92973 898 aaKnown RBP19.91■□□□□ 0.78
CHMP1A-204ENST00000547687 IL17RAQ96F46 866 aa19.91■□□□□ 0.78
CHMP1A-204ENST00000547687 DUOX1Q9NRD9 1551 aa19.91■□□□□ 0.78
CHMP1A-204ENST00000547687 CNNM1Q9NRU3 951 aa19.91■□□□□ 0.78
CHMP1A-204ENST00000547687 DIAPH3Q9NSV4 1193 aa19.91■□□□□ 0.78
CHMP1A-204ENST00000547687 ZNF609O15014 1411 aa19.9■□□□□ 0.78
CHMP1A-204ENST00000547687 A0A1B0GUL7 405 aa19.9■□□□□ 0.78
CHMP1A-204ENST00000547687 PPIP5K2O43314 1243 aa19.9■□□□□ 0.78
CHMP1A-204ENST00000547687 HSPA4P34932 840 aa19.9■□□□□ 0.78
CHMP1A-204ENST00000547687 MPNDQ8N594 471 aa19.9■□□□□ 0.78
CHMP1A-204ENST00000547687 RUFY2Q8WXA3 655 aa19.9■□□□□ 0.78
CHMP1A-204ENST00000547687 KIAA1211Q6ZU35 1233 aa19.9■□□□□ 0.78
CHMP1A-204ENST00000547687 JDP2Q8WYK2 163 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms