RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 NWD2Q9ULI1 1742 aa18.35■□□□□ 0.53
BRF1-212ENST00000547562 MYH15Q9Y2K3 1946 aa18.35■□□□□ 0.53
BRF1-212ENST00000547562 ZFYP08048 801 aaPredicted RBP18.34■□□□□ 0.53
BRF1-212ENST00000547562 GPTP24298 496 aa18.34■□□□□ 0.53
BRF1-212ENST00000547562 AKAP11Q9UKA4 1901 aa18.34■□□□□ 0.53
BRF1-212ENST00000547562 TTLL11Q8NHH1 800 aa18.34■□□□□ 0.53
BRF1-212ENST00000547562 SPATA32Q96LK8 384 aa18.34■□□□□ 0.53
BRF1-212ENST00000547562 ZKSCAN5Q9Y2L8 839 aa18.34■□□□□ 0.53
BRF1-212ENST00000547562 RIPOR2Q9Y4F9 1068 aa18.34■□□□□ 0.53
BRF1-212ENST00000547562 WNK3Q9BYP7 1800 aa18.34■□□□□ 0.53
BRF1-212ENST00000547562 APOBRQ0VD83 1088 aa18.33■□□□□ 0.53
BRF1-212ENST00000547562 SCARF1Q14162 830 aa18.33■□□□□ 0.53
BRF1-212ENST00000547562 DDX11Q96FC9 970 aa18.33■□□□□ 0.53
BRF1-212ENST00000547562 ITGA6P23229 1130 aa18.33■□□□□ 0.52
BRF1-212ENST00000547562 MCM5P33992 734 aa18.33■□□□□ 0.52
BRF1-212ENST00000547562 RESTQ13127 1097 aa18.33■□□□□ 0.52
BRF1-212ENST00000547562 NSUN7Q8NE18 718 aaKnown RBP18.33■□□□□ 0.52
BRF1-212ENST00000547562 LEO1Q8WVC0 666 aaPredicted RBP18.33■□□□□ 0.52
BRF1-212ENST00000547562 GREM2Q9H772 168 aa18.33■□□□□ 0.52
BRF1-212ENST00000547562 TFIP11Q9UBB9 837 aaKnown RBP18.33■□□□□ 0.52
BRF1-212ENST00000547562 H3BQV1 296 aa18.32■□□□□ 0.52
BRF1-212ENST00000547562 ZAP70P43403 619 aa18.32■□□□□ 0.52
BRF1-212ENST00000547562 CTSWP56202 376 aa18.32■□□□□ 0.52
BRF1-212ENST00000547562 ATP2B3Q16720 1220 aa18.32■□□□□ 0.52
BRF1-212ENST00000547562 METTL24Q5JXM2 366 aa18.32■□□□□ 0.52
BRF1-212ENST00000547562 IFFO2Q5TF58 517 aa18.32■□□□□ 0.52
BRF1-212ENST00000547562 LDHAL6AQ6ZMR3 332 aa18.32■□□□□ 0.52
BRF1-212ENST00000547562 ZBTB1Q9Y2K1 713 aa18.32■□□□□ 0.52
BRF1-212ENST00000547562 ZNF500O60304 480 aaPredicted RBP18.32■□□□□ 0.52
BRF1-212ENST00000547562 WASHC4Q2M389 1173 aa18.32■□□□□ 0.52
BRF1-212ENST00000547562 TTLL5Q6EMB2 1281 aa18.32■□□□□ 0.52
BRF1-212ENST00000547562 ZSCAN16Q9H4T2 348 aaPredicted RBP18.32■□□□□ 0.52
BRF1-212ENST00000547562 FOXP2O15409 715 aa18.31■□□□□ 0.52
BRF1-212ENST00000547562 CTDNEP1O95476 244 aa18.31■□□□□ 0.52
BRF1-212ENST00000547562 LIG1P18858 919 aa18.31■□□□□ 0.52
BRF1-212ENST00000547562 UBE2Q2Q8WVN8 375 aa18.31■□□□□ 0.52
BRF1-212ENST00000547562 USP25Q9UHP3 1055 aa18.31■□□□□ 0.52
BRF1-212ENST00000547562 CTNNA3Q9UI47 895 aa18.31■□□□□ 0.52
BRF1-212ENST00000547562 COL16A1Q07092 1604 aaPredicted RBP18.31■□□□□ 0.52
BRF1-212ENST00000547562 ANKRD18BA2A2Z9 1011 aa18.31■□□□□ 0.52
BRF1-212ENST00000547562 EXOC5O00471 708 aa18.31■□□□□ 0.52
BRF1-212ENST00000547562 HMGN5P82970 282 aaKnown RBP18.31■□□□□ 0.52
BRF1-212ENST00000547562 APPBP2Q92624 585 aa18.31■□□□□ 0.52
BRF1-212ENST00000547562 GOLGA6L4A6NEF3 574 aa18.3■□□□□ 0.52
BRF1-212ENST00000547562 IRS4O14654 1257 aaPredicted RBP18.3■□□□□ 0.52
BRF1-212ENST00000547562 FBXL16Q8N461 479 aa18.3■□□□□ 0.52
BRF1-212ENST00000547562 ZNF274Q96GC6 653 aaPredicted RBP18.3■□□□□ 0.52
BRF1-212ENST00000547562 PTPDC1A2A3K4 754 aa18.3■□□□□ 0.52
BRF1-212ENST00000547562 PI16Q6UXB8 463 aa18.3■□□□□ 0.52
BRF1-212ENST00000547562 SYTL4Q96C24 671 aaPredicted RBP18.3■□□□□ 0.52
BRF1-212ENST00000547562 NUP62CLQ9H1M0 184 aa18.3■□□□□ 0.52
BRF1-212ENST00000547562 TRMT112Q9UI30 125 aaKnown RBP18.3■□□□□ 0.52
BRF1-212ENST00000547562 DOT1LQ8TEK3 1739 aa18.3■□□□□ 0.52
BRF1-212ENST00000547562 COL22A1Q8NFW1 1626 aaPredicted RBP18.3■□□□□ 0.52
BRF1-212ENST00000547562 PTMAP06454 111 aaKnown RBP18.29■□□□□ 0.52
BRF1-212ENST00000547562 CCDC192P0DO97 292 aa18.29■□□□□ 0.52
BRF1-212ENST00000547562 IMMTQ16891 758 aaKnown RBP18.29■□□□□ 0.52
BRF1-212ENST00000547562 NAA16Q6N069 864 aaPredicted RBP18.29■□□□□ 0.52
BRF1-212ENST00000547562 CHST3Q7LGC8 479 aa18.29■□□□□ 0.52
BRF1-212ENST00000547562 CNNM1Q9NRU3 951 aa18.29■□□□□ 0.52
BRF1-212ENST00000547562 KIF3AQ9Y496 699 aa18.29■□□□□ 0.52
BRF1-212ENST00000547562 SALL1Q9NSC2 1324 aa18.29■□□□□ 0.52
BRF1-212ENST00000547562 ERVV-1B6SEH8 477 aa18.29■□□□□ 0.52
BRF1-212ENST00000547562 OFD1O75665 1012 aa18.29■□□□□ 0.52
BRF1-212ENST00000547562 PDIA3P30101 505 aaKnown RBP18.29■□□□□ 0.52
BRF1-212ENST00000547562 IL6STP40189 918 aaPredicted RBP18.29■□□□□ 0.52
BRF1-212ENST00000547562 MCAMP43121 646 aa18.29■□□□□ 0.52
BRF1-212ENST00000547562 CCT2P78371 535 aaKnown RBP18.29■□□□□ 0.52
BRF1-212ENST00000547562 MAP3K11Q16584 847 aa18.29■□□□□ 0.52
BRF1-212ENST00000547562 VGLL2Q8N8G2 317 aa18.29■□□□□ 0.52
BRF1-212ENST00000547562 PUS7LQ9H0K6 701 aaKnown RBP18.29■□□□□ 0.52
BRF1-212ENST00000547562 MYO5AQ9Y4I1 1855 aaKnown RBP18.28■□□□□ 0.52
BRF1-212ENST00000547562 ROBO1Q9Y6N7 1651 aa18.28■□□□□ 0.52
BRF1-212ENST00000547562 FGAP02671 866 aa18.28■□□□□ 0.52
BRF1-212ENST00000547562 ZNF512BQ96KM6 892 aaPredicted RBP18.28■□□□□ 0.52
BRF1-212ENST00000547562 DDX60Q8IY21 1712 aaKnown RBP18.28■□□□□ 0.52
BRF1-212ENST00000547562 PDE8AO60658 829 aa18.28■□□□□ 0.52
BRF1-212ENST00000547562 KDM4AO75164 1064 aa18.28■□□□□ 0.52
BRF1-212ENST00000547562 ADCY5O95622 1261 aa18.28■□□□□ 0.52
BRF1-212ENST00000547562 EVCP57679 992 aa18.28■□□□□ 0.52
BRF1-212ENST00000547562 DZIP3Q86Y13 1208 aaKnown RBP18.28■□□□□ 0.52
BRF1-212ENST00000547562 CHMP4CQ96CF2 233 aa18.28■□□□□ 0.52
BRF1-212ENST00000547562 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.28■□□□□ 0.521e-6■■■■□ 26.5
BRF1-212ENST00000547562 NCOA5Q9HCD5 579 aaKnown RBP18.28■□□□□ 0.52
BRF1-212ENST00000547562 DACT1Q9NYF0 836 aa18.28■□□□□ 0.52
BRF1-212ENST00000547562 CFAP45Q9UL16 551 aa18.28■□□□□ 0.52
BRF1-212ENST00000547562 PGBD1Q96JS3 809 aa18.27■□□□□ 0.52
BRF1-212ENST00000547562 DDX19AQ9NUU7 478 aaKnown RBP18.27■□□□□ 0.52
BRF1-212ENST00000547562 TBC1D2BQ9UPU7 963 aa18.27■□□□□ 0.52
BRF1-212ENST00000547562 HAND2P61296 217 aa18.27■□□□□ 0.51
BRF1-212ENST00000547562 NAP1L2Q9ULW6 460 aaPredicted RBP18.27■□□□□ 0.51
BRF1-212ENST00000547562 UBN2Q6ZU65 1347 aa18.26■□□□□ 0.51
BRF1-212ENST00000547562 GPAA1O43292 621 aa18.26■□□□□ 0.51
BRF1-212ENST00000547562 CAMK4Q16566 473 aa18.26■□□□□ 0.51
BRF1-212ENST00000547562 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.26■□□□□ 0.51
BRF1-212ENST00000547562 PDE8BO95263 885 aa18.25■□□□□ 0.51
BRF1-212ENST00000547562 ZNF34Q8IZ26 560 aa18.25■□□□□ 0.51
BRF1-212ENST00000547562 TNMDQ9H2S6 317 aa18.25■□□□□ 0.51
BRF1-212ENST00000547562 LRP5O75197 1615 aa18.25■□□□□ 0.51
BRF1-212ENST00000547562 AHDC1Q5TGY3 1603 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms