RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 MPHOSPH8Q99549 860 aa16.99■□□□□ 0.31
CPSF6-204ENST00000547486 LEMD3Q9Y2U8 911 aa16.99■□□□□ 0.31
CPSF6-204ENST00000547486 USP17L8P0C7I0 530 aa16.98■□□□□ 0.31
CPSF6-204ENST00000547486 SCARF1Q14162 830 aa16.98■□□□□ 0.31
CPSF6-204ENST00000547486 DACT2Q5SW24 774 aa16.98■□□□□ 0.31
CPSF6-204ENST00000547486 ZNF804BA4D1E1 1349 aa16.97■□□□□ 0.31
CPSF6-204ENST00000547486 ANKRD18BA2A2Z9 1011 aa16.97■□□□□ 0.31
CPSF6-204ENST00000547486 SNAP23O00161 211 aa16.97■□□□□ 0.31
CPSF6-204ENST00000547486 MAP2K2P36507 400 aa16.97■□□□□ 0.31
CPSF6-204ENST00000547486 CHRNDQ07001 517 aa16.97■□□□□ 0.31
CPSF6-204ENST00000547486 ANKRD2Q9GZV1 360 aa16.97■□□□□ 0.31
CPSF6-204ENST00000547486 COA1Q9GZY4 146 aa16.97■□□□□ 0.31
CPSF6-204ENST00000547486 MYOZ2Q9NPC6 264 aa16.97■□□□□ 0.31
CPSF6-204ENST00000547486 GGA3Q9NZ52 723 aa16.97■□□□□ 0.31
CPSF6-204ENST00000547486 TRPM7Q96QT4 1865 aa16.97■□□□□ 0.31
CPSF6-204ENST00000547486 ZNF609O15014 1411 aa16.96■□□□□ 0.31
CPSF6-204ENST00000547486 ANGEL2Q5VTE6 544 aaKnown RBP16.96■□□□□ 0.31
CPSF6-204ENST00000547486 LMBR1LQ6UX01 489 aa16.96■□□□□ 0.31
CPSF6-204ENST00000547486 HELBQ8NG08 1087 aaPredicted RBP16.96■□□□□ 0.31
CPSF6-204ENST00000547486 ZIC5Q96T25 663 aa16.96■□□□□ 0.31
CPSF6-204ENST00000547486 SCAF8Q9UPN6 1271 aaKnown RBP16.96■□□□□ 0.31
CPSF6-204ENST00000547486 GRM8O00222 908 aa16.95■□□□□ 0.3
CPSF6-204ENST00000547486 TAF5LO75529 589 aa16.95■□□□□ 0.3
CPSF6-204ENST00000547486 HUNKP57058 714 aa16.95■□□□□ 0.3
CPSF6-204ENST00000547486 IFIT5Q13325 482 aaKnown RBP16.95■□□□□ 0.3
CPSF6-204ENST00000547486 STRIP1Q5VSL9 837 aa16.95■□□□□ 0.3
CPSF6-204ENST00000547486 SLC4A10Q6U841 1118 aa16.95■□□□□ 0.3
CPSF6-204ENST00000547486 FBXW7Q969H0 707 aa16.95■□□□□ 0.3
CPSF6-204ENST00000547486 ZNF594Q96JF6 807 aaPredicted RBP16.95■□□□□ 0.3
CPSF6-204ENST00000547486 IRS2Q9Y4H2 1338 aa16.95■□□□□ 0.3
CPSF6-204ENST00000547486 SULF1Q8IWU6 871 aa16.94■□□□□ 0.3
CPSF6-204ENST00000547486 GBA2Q9HCG7 927 aaPredicted RBP16.94■□□□□ 0.3
CPSF6-204ENST00000547486 TSKSQ9UJT2 592 aa16.94■□□□□ 0.3
CPSF6-204ENST00000547486 CHMP3Q9Y3E7 222 aa16.94■□□□□ 0.3
CPSF6-204ENST00000547486 FAM155AB1AL88 458 aaPredicted RBP16.93■□□□□ 0.3
CPSF6-204ENST00000547486 ALDH1L1O75891 902 aa16.93■□□□□ 0.3
CPSF6-204ENST00000547486 NBPF9Q3BBW0 867 aa16.93■□□□□ 0.3
CPSF6-204ENST00000547486 TTLL5Q6EMB2 1281 aa16.93■□□□□ 0.3
CPSF6-204ENST00000547486 MRPL50Q8N5N7 158 aaKnown RBP16.93■□□□□ 0.3
CPSF6-204ENST00000547486 CDCA5Q96FF9 252 aa16.93■□□□□ 0.3
CPSF6-204ENST00000547486 KAZALD1Q96I82 304 aa16.93■□□□□ 0.3
CPSF6-204ENST00000547486 SRCIN1Q9C0H9 1055 aa16.93■□□□□ 0.3
CPSF6-204ENST00000547486 C9orf78Q9NZ63 289 aaPredicted RBP16.93■□□□□ 0.3
CPSF6-204ENST00000547486 MYH3P11055 1940 aa16.93■□□□□ 0.3
CPSF6-204ENST00000547486 NBPF7P0C2Y1 421 aaPredicted RBP16.92■□□□□ 0.3
CPSF6-204ENST00000547486 KCNJ4P48050 445 aa16.92■□□□□ 0.3
CPSF6-204ENST00000547486 GTF2IP78347 998 aa16.92■□□□□ 0.3
CPSF6-204ENST00000547486 RGMBQ6NW40 437 aa16.92■□□□□ 0.3
CPSF6-204ENST00000547486 C2orf69Q8N8R5 385 aa16.92■□□□□ 0.3
CPSF6-204ENST00000547486 BEGAINQ9BUH8 593 aa16.92■□□□□ 0.3
CPSF6-204ENST00000547486 CD209Q9NNX6 404 aa16.92■□□□□ 0.3
CPSF6-204ENST00000547486 THSD7BQ9C0I4 1608 aa16.92■□□□□ 0.3
CPSF6-204ENST00000547486 SPEF2Q9C093 1822 aa16.91■□□□□ 0.3
CPSF6-204ENST00000547486 SLFN5Q08AF3 891 aa16.91■□□□□ 0.3
CPSF6-204ENST00000547486 CCDC57Q2TAC2 916 aa16.91■□□□□ 0.3
CPSF6-204ENST00000547486 PRAMEF18Q5VWM3 479 aa16.91■□□□□ 0.3
CPSF6-204ENST00000547486 CDCA7LQ96GN5 454 aa16.91■□□□□ 0.3
CPSF6-204ENST00000547486 SUCLG2Q96I99 432 aa16.91■□□□□ 0.3
CPSF6-204ENST00000547486 CACNA1FO60840 1977 aa16.91■□□□□ 0.3
CPSF6-204ENST00000547486 POLR2AP24928 1970 aaKnown RBP16.91■□□□□ 0.3
CPSF6-204ENST00000547486 E9PSI1 815 aa16.9■□□□□ 0.3
CPSF6-204ENST00000547486 BRPF1P55201 1214 aaPredicted RBP16.9■□□□□ 0.3
CPSF6-204ENST00000547486 LDHAL6AQ6ZMR3 332 aa16.9■□□□□ 0.3
CPSF6-204ENST00000547486 C15orf52Q6ZUT6 534 aaKnown RBP16.9■□□□□ 0.3
CPSF6-204ENST00000547486 KIAA0825Q8IV33 1275 aa16.9■□□□□ 0.3
CPSF6-204ENST00000547486 OGFOD1Q8N543 542 aa16.9■□□□□ 0.3
CPSF6-204ENST00000547486 MYO3BQ8WXR4 1341 aa16.9■□□□□ 0.3
CPSF6-204ENST00000547486 WNT10BO00744 389 aa16.89■□□□□ 0.29
CPSF6-204ENST00000547486 PLIN1O60240 522 aa16.89■□□□□ 0.29
CPSF6-204ENST00000547486 ZNF157P51786 506 aaPredicted RBP16.89■□□□□ 0.29
CPSF6-204ENST00000547486 NOGQ13253 232 aa16.89■□□□□ 0.29
CPSF6-204ENST00000547486 CERS5Q8N5B7 392 aa16.89■□□□□ 0.29
CPSF6-204ENST00000547486 SSH1Q8WYL5 1049 aa16.89■□□□□ 0.29
CPSF6-204ENST00000547486 PUS3Q9BZE2 481 aaKnown RBP16.89■□□□□ 0.29
CPSF6-204ENST00000547486 UTYO14607 1347 aa16.89■□□□□ 0.29
CPSF6-204ENST00000547486 PITPNM2Q9BZ72 1349 aa16.89■□□□□ 0.29
CPSF6-204ENST00000547486 SASH1O94885 1247 aa16.88■□□□□ 0.29
CPSF6-204ENST00000547486 TAF7LQ5H9L4 462 aa16.88■□□□□ 0.29
CPSF6-204ENST00000547486 MOB2Q70IA6 237 aa16.88■□□□□ 0.29
CPSF6-204ENST00000547486 CCDC102AQ96A19 550 aa16.88■□□□□ 0.29
CPSF6-204ENST00000547486 CNNM1Q9NRU3 951 aa16.88■□□□□ 0.29
CPSF6-204ENST00000547486 PSME4Q14997 1843 aa16.88■□□□□ 0.29
CPSF6-204ENST00000547486 IL1R1P14778 569 aa16.87■□□□□ 0.29
CPSF6-204ENST00000547486 KIF23Q02241 960 aaPredicted RBP16.87■□□□□ 0.29
CPSF6-204ENST00000547486 ZBED3Q96IU2 234 aaPredicted RBP16.87■□□□□ 0.29
CPSF6-204ENST00000547486 SLC10A3P09131 477 aa16.86■□□□□ 0.29
CPSF6-204ENST00000547486 TRMT2AQ8IZ69 625 aaKnown RBP16.86■□□□□ 0.29
CPSF6-204ENST00000547486 BICC1Q9H694 974 aaKnown RBP16.86■□□□□ 0.29
CPSF6-204ENST00000547486 JAG2Q9Y219 1238 aa16.86■□□□□ 0.29
CPSF6-204ENST00000547486 PCDHAC2Q9Y5I4 1007 aa16.86■□□□□ 0.29
CPSF6-204ENST00000547486 ZNF646O15015 1829 aaPredicted RBP16.85■□□□□ 0.29
CPSF6-204ENST00000547486 CA12O43570 354 aa16.85■□□□□ 0.29
CPSF6-204ENST00000547486 MMP14P50281 582 aa16.85■□□□□ 0.29
CPSF6-204ENST00000547486 RABL6Q3YEC7 729 aaPredicted RBP16.85■□□□□ 0.29
CPSF6-204ENST00000547486 ANKRD44Q8N8A2 993 aa16.85■□□□□ 0.29
CPSF6-204ENST00000547486 RIPOR2Q9Y4F9 1068 aa16.85■□□□□ 0.29
CPSF6-204ENST00000547486 PTPRCP08575 1304 aa16.85■□□□□ 0.29
CPSF6-204ENST00000547486 UBE2Q2LH0YL09 131 aa16.84■□□□□ 0.29
CPSF6-204ENST00000547486 FKBP1BP68106 108 aa16.84■□□□□ 0.29
CPSF6-204ENST00000547486 ZNF804AQ7Z570 1209 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms