RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 GMPSP49915 693 aaPredicted RBP21.27■■□□□ 1
RBFOX1-207ENST00000547338 HTRA3P83110 453 aa21.27■■□□□ 1
RBFOX1-207ENST00000547338 CHADLQ6NUI6 762 aa21.27■■□□□ 1
RBFOX1-207ENST00000547338 EYA3Q99504 573 aa21.27■■□□□ 1
RBFOX1-207ENST00000547338 USP44Q9H0E7 712 aa21.27■■□□□ 1
RBFOX1-207ENST00000547338 ZNF646O15015 1829 aaPredicted RBP21.27■■□□□ 1
RBFOX1-207ENST00000547338 SHTN1A0MZ66 631 aa21.26■□□□□ 0.99
RBFOX1-207ENST00000547338 CCT4P50991 539 aaKnown RBP21.26■□□□□ 0.99
RBFOX1-207ENST00000547338 APLP1P51693 650 aa21.26■□□□□ 0.99
RBFOX1-207ENST00000547338 LDHDQ86WU2 507 aa21.26■□□□□ 0.99
RBFOX1-207ENST00000547338 GPRC5DQ9NZD1 345 aa21.26■□□□□ 0.99
RBFOX1-207ENST00000547338 PSME4Q14997 1843 aa21.26■□□□□ 0.99
RBFOX1-207ENST00000547338 PSMD14O00487 310 aa21.25■□□□□ 0.99
RBFOX1-207ENST00000547338 ATP2B4P23634 1241 aa21.25■□□□□ 0.99
RBFOX1-207ENST00000547338 IGHMBP2P38935 993 aaKnown RBP21.25■□□□□ 0.99
RBFOX1-207ENST00000547338 BECN1Q14457 450 aa21.25■□□□□ 0.99
RBFOX1-207ENST00000547338 ANKRD44Q8N8A2 993 aa21.25■□□□□ 0.99
RBFOX1-207ENST00000547338 ANKRD18BA2A2Z9 1011 aa21.24■□□□□ 0.99
RBFOX1-207ENST00000547338 KLRK1P26718 216 aa21.24■□□□□ 0.99
RBFOX1-207ENST00000547338 EAPPQ56P03 285 aaPredicted RBP21.24■□□□□ 0.99
RBFOX1-207ENST00000547338 TXNRD3Q86VQ6 643 aa21.24■□□□□ 0.99
RBFOX1-207ENST00000547338 ZNF594Q96JF6 807 aaPredicted RBP21.24■□□□□ 0.99
RBFOX1-207ENST00000547338 IRS2Q9Y4H2 1338 aa21.24■□□□□ 0.99
RBFOX1-207ENST00000547338 IFIT5Q13325 482 aaKnown RBP21.24■□□□□ 0.99
RBFOX1-207ENST00000547338 RABL6Q3YEC7 729 aaPredicted RBP21.24■□□□□ 0.99
RBFOX1-207ENST00000547338 DNAJC5GQ8N7S2 189 aa21.24■□□□□ 0.99
RBFOX1-207ENST00000547338 ZC3H12CQ9C0D7 883 aaKnown RBP21.24■□□□□ 0.99
RBFOX1-207ENST00000547338 BICC1Q9H694 974 aaKnown RBP21.24■□□□□ 0.99
RBFOX1-207ENST00000547338 ZBTB12Q9Y330 459 aaPredicted RBP21.24■□□□□ 0.99
RBFOX1-207ENST00000547338 MED23Q9ULK4 1368 aa21.23■□□□□ 0.99
RBFOX1-207ENST00000547338 SNAP23O00161 211 aa21.23■□□□□ 0.99
RBFOX1-207ENST00000547338 ITGBL1O95965 494 aaPredicted RBP21.23■□□□□ 0.99
RBFOX1-207ENST00000547338 CHRNDQ07001 517 aa21.23■□□□□ 0.99
RBFOX1-207ENST00000547338 TNIP1Q15025 636 aa21.23■□□□□ 0.99
RBFOX1-207ENST00000547338 CHMP3Q9Y3E7 222 aa21.23■□□□□ 0.99
RBFOX1-207ENST00000547338 PASKQ96RG2 1323 aa21.22■□□□□ 0.99
RBFOX1-207ENST00000547338 BMP2KLQ5H9B9 411 aa21.22■□□□□ 0.99
RBFOX1-207ENST00000547338 PNMA8AQ86V59 439 aaPredicted RBP21.22■□□□□ 0.99
RBFOX1-207ENST00000547338 MPHOSPH8Q99549 860 aa21.22■□□□□ 0.99
RBFOX1-207ENST00000547338 DCTPP1Q9H773 170 aa21.22■□□□□ 0.99
RBFOX1-207ENST00000547338 LMOD1P29536 600 aaPredicted RBP21.21■□□□□ 0.99
RBFOX1-207ENST00000547338 TBC1D32Q96NH3 1257 aa21.21■□□□□ 0.99
RBFOX1-207ENST00000547338 HIRAP54198 1017 aaPredicted RBP21.2■□□□□ 0.98
RBFOX1-207ENST00000547338 MAP1SQ66K74 1059 aaPredicted RBP21.2■□□□□ 0.98
RBFOX1-207ENST00000547338 HELBQ8NG08 1087 aaPredicted RBP21.2■□□□□ 0.98
RBFOX1-207ENST00000547338 VIL1P09327 827 aaKnown RBP21.19■□□□□ 0.98
RBFOX1-207ENST00000547338 PUS3Q9BZE2 481 aaKnown RBP21.19■□□□□ 0.98
RBFOX1-207ENST00000547338 ANKRD2Q9GZV1 360 aa21.19■□□□□ 0.98
RBFOX1-207ENST00000547338 LEMD3Q9Y2U8 911 aa21.19■□□□□ 0.98
RBFOX1-207ENST00000547338 ZNF609O15014 1411 aa21.19■□□□□ 0.98
RBFOX1-207ENST00000547338 ZNF804BA4D1E1 1349 aa21.19■□□□□ 0.98
RBFOX1-207ENST00000547338 HMMRO75330 724 aa21.19■□□□□ 0.98
RBFOX1-207ENST00000547338 TAF5LO75529 589 aa21.19■□□□□ 0.98
RBFOX1-207ENST00000547338 CCDC57Q2TAC2 916 aa21.19■□□□□ 0.98
RBFOX1-207ENST00000547338 ANKRD45Q5TZF3 282 aa21.19■□□□□ 0.98
RBFOX1-207ENST00000547338 USP50Q70EL3 339 aaPredicted RBP21.19■□□□□ 0.98
RBFOX1-207ENST00000547338 SIRT2Q8IXJ6 389 aa21.19■□□□□ 0.98
RBFOX1-207ENST00000547338 TRPM4Q8TD43 1214 aa21.19■□□□□ 0.98
RBFOX1-207ENST00000547338 ADARB2Q9NS39 739 aaKnown RBP21.19■□□□□ 0.98
RBFOX1-207ENST00000547338 EGFRP00533 1210 aa21.18■□□□□ 0.98
RBFOX1-207ENST00000547338 MICALL2Q8IY33 904 aa21.18■□□□□ 0.98
RBFOX1-207ENST00000547338 DPF2Q92785 391 aa21.18■□□□□ 0.98
RBFOX1-207ENST00000547338 CNOT7Q9UIV1 285 aaKnown RBP21.18■□□□□ 0.98
RBFOX1-207ENST00000547338 GMLQ99445 158 aa21.17■□□□□ 0.98
RBFOX1-207ENST00000547338 CLEC11AQ9Y240 323 aa21.17■□□□□ 0.98
RBFOX1-207ENST00000547338 LDHAL6AQ6ZMR3 332 aa21.16■□□□□ 0.98
RBFOX1-207ENST00000547338 PODNQ7Z5L7 613 aa21.16■□□□□ 0.98
RBFOX1-207ENST00000547338 CNTROBQ8N137 903 aa21.16■□□□□ 0.98
RBFOX1-207ENST00000547338 SEC24BO95487 1268 aa21.15■□□□□ 0.98
RBFOX1-207ENST00000547338 RPS12P25398 132 aaKnown RBP21.15■□□□□ 0.98
RBFOX1-207ENST00000547338 FMR1Q06787 632 aaKnown RBP eCLIP21.15■□□□□ 0.98
RBFOX1-207ENST00000547338 C15orf52Q6ZUT6 534 aaKnown RBP21.15■□□□□ 0.98
RBFOX1-207ENST00000547338 PGAP2Q9UHJ9 254 aa21.15■□□□□ 0.98
RBFOX1-207ENST00000547338 RIPOR2Q9Y4F9 1068 aa21.15■□□□□ 0.98
RBFOX1-207ENST00000547338 GNAI3P08754 354 aa21.14■□□□□ 0.98
RBFOX1-207ENST00000547338 RFX5P48382 616 aaPredicted RBP21.14■□□□□ 0.98
RBFOX1-207ENST00000547338 SAMD7Q7Z3H4 446 aa21.14■□□□□ 0.98
RBFOX1-207ENST00000547338 KLHDC4Q8TBB5 520 aa21.14■□□□□ 0.98
RBFOX1-207ENST00000547338 LNPKQ9C0E8 428 aa21.14■□□□□ 0.98
RBFOX1-207ENST00000547338 LRRC24Q50LG9 513 aa21.14■□□□□ 0.97
RBFOX1-207ENST00000547338 RSBN1LQ6PCB5 846 aaPredicted RBP21.14■□□□□ 0.97
RBFOX1-207ENST00000547338 MEIS3Q99687 375 aa21.14■□□□□ 0.97
RBFOX1-207ENST00000547338 MXD3Q9BW11 206 aa21.14■□□□□ 0.97
RBFOX1-207ENST00000547338 COA1Q9GZY4 146 aa21.14■□□□□ 0.97
RBFOX1-207ENST00000547338 TAF7LQ5H9L4 462 aa21.13■□□□□ 0.97
RBFOX1-207ENST00000547338 DACT2Q5SW24 774 aa21.13■□□□□ 0.97
RBFOX1-207ENST00000547338 CEP85Q6P2H3 762 aa21.13■□□□□ 0.97
RBFOX1-207ENST00000547338 CNNM1Q9NRU3 951 aa21.13■□□□□ 0.97
RBFOX1-207ENST00000547338 USP17L3A6NCW0 530 aa21.12■□□□□ 0.97
RBFOX1-207ENST00000547338 USP17L4A6NCW7 530 aa21.12■□□□□ 0.97
RBFOX1-207ENST00000547338 G3V3G9 751 aa21.12■□□□□ 0.97
RBFOX1-207ENST00000547338 DCAF8Q5TAQ9 597 aa21.12■□□□□ 0.97
RBFOX1-207ENST00000547338 USP17L1Q7RTZ2 530 aa21.12■□□□□ 0.97
RBFOX1-207ENST00000547338 TRAF5O00463 557 aa21.11■□□□□ 0.97
RBFOX1-207ENST00000547338 ZNF280AP59817 542 aaPredicted RBP21.11■□□□□ 0.97
RBFOX1-207ENST00000547338 TBC1D10BQ4KMP7 808 aaPredicted RBP21.11■□□□□ 0.97
RBFOX1-207ENST00000547338 VGLL2Q8N8G2 317 aa21.11■□□□□ 0.97
RBFOX1-207ENST00000547338 AGBL3Q8NEM8 1001 aa21.11■□□□□ 0.97
RBFOX1-207ENST00000547338 KLRG1Q96E93 195 aa21.11■□□□□ 0.97
RBFOX1-207ENST00000547338 C22orf23Q9BZE7 217 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms