RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 FGFR2P21802 821 aa13.69□□□□□ -0.22
GCN1-202ENST00000547263 EPS15P42566 896 aa13.69□□□□□ -0.22
GCN1-202ENST00000547263 LDHDQ86WU2 507 aa13.69□□□□□ -0.22
GCN1-202ENST00000547263 SMC1BQ8NDV3 1235 aa13.69□□□□□ -0.22
GCN1-202ENST00000547263 CNNM1Q9NRU3 951 aa13.69□□□□□ -0.22
GCN1-202ENST00000547263 PGAP2Q9UHJ9 254 aa13.69□□□□□ -0.22
GCN1-202ENST00000547263 PDE8BO95263 885 aa13.68□□□□□ -0.22
GCN1-202ENST00000547263 IL1R1P14778 569 aa13.68□□□□□ -0.22
GCN1-202ENST00000547263 GMPSP49915 693 aaPredicted RBP13.68□□□□□ -0.22
GCN1-202ENST00000547263 TAF7LQ5H9L4 462 aa13.68□□□□□ -0.22
GCN1-202ENST00000547263 USP50Q70EL3 339 aaPredicted RBP13.68□□□□□ -0.22
GCN1-202ENST00000547263 PNMA8AQ86V59 439 aaPredicted RBP13.68□□□□□ -0.22
GCN1-202ENST00000547263 HELBQ8NG08 1087 aaPredicted RBP13.68□□□□□ -0.22
GCN1-202ENST00000547263 KLHDC4Q8TBB5 520 aa13.68□□□□□ -0.22
GCN1-202ENST00000547263 CD209Q9NNX6 404 aa13.68□□□□□ -0.22
GCN1-202ENST00000547263 GJA3Q9Y6H8 435 aa13.68□□□□□ -0.22
GCN1-202ENST00000547263 GNAI2P04899 355 aa13.67□□□□□ -0.22
GCN1-202ENST00000547263 HSPA6P17066 643 aa13.67□□□□□ -0.22
GCN1-202ENST00000547263 ZNF280AP59817 542 aaPredicted RBP13.67□□□□□ -0.22
GCN1-202ENST00000547263 POLA2Q14181 598 aa13.67□□□□□ -0.22
GCN1-202ENST00000547263 DACT2Q5SW24 774 aa13.67□□□□□ -0.22
GCN1-202ENST00000547263 STRIP1Q5VSL9 837 aa13.67□□□□□ -0.22
GCN1-202ENST00000547263 C16orf71Q8IYS4 520 aaPredicted RBP13.67□□□□□ -0.22
GCN1-202ENST00000547263 AGBL3Q8NEM8 1001 aa13.67□□□□□ -0.22
GCN1-202ENST00000547263 ADARB2Q9NS39 739 aaKnown RBP13.67□□□□□ -0.22
GCN1-202ENST00000547263 PASKQ96RG2 1323 aa13.66□□□□□ -0.22
GCN1-202ENST00000547263 USP17L3A6NCW0 530 aa13.66□□□□□ -0.22
GCN1-202ENST00000547263 USP17L4A6NCW7 530 aa13.66□□□□□ -0.22
GCN1-202ENST00000547263 ITGBL1O95965 494 aaPredicted RBP13.66□□□□□ -0.22
GCN1-202ENST00000547263 MS4A1P11836 297 aa13.66□□□□□ -0.22
GCN1-202ENST00000547263 FKBP1AP62942 108 aaKnown RBP13.66□□□□□ -0.22
GCN1-202ENST00000547263 PDE3AQ14432 1141 aa13.66□□□□□ -0.22
GCN1-202ENST00000547263 CHADLQ6NUI6 762 aa13.66□□□□□ -0.22
GCN1-202ENST00000547263 RSBN1LQ6PCB5 846 aaPredicted RBP13.66□□□□□ -0.22
GCN1-202ENST00000547263 USP17L1Q7RTZ2 530 aa13.66□□□□□ -0.22
GCN1-202ENST00000547263 ZBTB12Q9Y330 459 aaPredicted RBP13.66□□□□□ -0.22
GCN1-202ENST00000547263 FAM205AQ6ZU69 1335 aa13.65□□□□□ -0.22
GCN1-202ENST00000547263 PNMA6EA0A0J9YXQ4 647 aa13.65□□□□□ -0.22
GCN1-202ENST00000547263 LMOD1P29536 600 aaPredicted RBP13.65□□□□□ -0.22
GCN1-202ENST00000547263 MMP14P50281 582 aa13.65□□□□□ -0.22
GCN1-202ENST00000547263 HIRAP54198 1017 aaPredicted RBP13.65□□□□□ -0.22
GCN1-202ENST00000547263 FBXO33Q7Z6M2 555 aa13.65□□□□□ -0.22
GCN1-202ENST00000547263 FTSJ3Q8IY81 847 aaKnown RBP13.65□□□□□ -0.22
GCN1-202ENST00000547263 TDRD7Q8NHU6 1098 aaKnown RBP13.65□□□□□ -0.22
GCN1-202ENST00000547263 PANK1Q8TE04 598 aa13.65□□□□□ -0.22
GCN1-202ENST00000547263 SSH3Q8TE77 659 aa13.65□□□□□ -0.22
GCN1-202ENST00000547263 ZC3H15Q8WU90 426 aaKnown RBP13.65□□□□□ -0.22
GCN1-202ENST00000547263 FAM84BQ96KN1 310 aaPredicted RBP13.65□□□□□ -0.22
GCN1-202ENST00000547263 CNOT7Q9UIV1 285 aaKnown RBP13.65□□□□□ -0.22
GCN1-202ENST00000547263 MYO3BQ8WXR4 1341 aa13.64□□□□□ -0.23
GCN1-202ENST00000547263 SHTN1A0MZ66 631 aa13.64□□□□□ -0.23
GCN1-202ENST00000547263 IL15P40933 162 aaPredicted RBP13.64□□□□□ -0.23
GCN1-202ENST00000547263 MVPQ14764 893 aaKnown RBP13.64□□□□□ -0.23
GCN1-202ENST00000547263 METTL24Q5JXM2 366 aa13.64□□□□□ -0.23
GCN1-202ENST00000547263 TRPM7Q96QT4 1865 aa13.63□□□□□ -0.23
GCN1-202ENST00000547263 ECM29Q5VYK3 1845 aa13.63□□□□□ -0.23
GCN1-202ENST00000547263 SRGAP3O43295 1099 aa13.63□□□□□ -0.23
GCN1-202ENST00000547263 SASH1O94885 1247 aa13.63□□□□□ -0.23
GCN1-202ENST00000547263 KCNJ4P48050 445 aa13.63□□□□□ -0.23
GCN1-202ENST00000547263 ATP8B2P98198 1209 aa13.63□□□□□ -0.23
GCN1-202ENST00000547263 PUM3Q15397 648 aaKnown RBP13.63□□□□□ -0.23
GCN1-202ENST00000547263 ZNF804AQ7Z570 1209 aa13.63□□□□□ -0.23
GCN1-202ENST00000547263 ITPRIPQ8IWB1 547 aa13.63□□□□□ -0.23
GCN1-202ENST00000547263 MICALL2Q8IY33 904 aa13.63□□□□□ -0.23
GCN1-202ENST00000547263 TRPM4Q8TD43 1214 aa13.63□□□□□ -0.23
GCN1-202ENST00000547263 PA2G4Q9UQ80 394 aaKnown RBP13.63□□□□□ -0.23
GCN1-202ENST00000547263 MYH13Q9UKX3 1938 aa13.62□□□□□ -0.23
GCN1-202ENST00000547263 EGFRP00533 1210 aa13.62□□□□□ -0.23
GCN1-202ENST00000547263 CERS5Q8N5B7 392 aa13.62□□□□□ -0.23
GCN1-202ENST00000547263 LPIN2Q92539 896 aa13.62□□□□□ -0.23
GCN1-202ENST00000547263 ZBED3Q96IU2 234 aaPredicted RBP13.62□□□□□ -0.23
GCN1-202ENST00000547263 ZBTB40Q9NUA8 1239 aa13.62□□□□□ -0.23
GCN1-202ENST00000547263 DDX19BQ9UMR2 479 aa13.62□□□□□ -0.23
GCN1-202ENST00000547263 NOP58Q9Y2X3 529 aaKnown RBP13.62□□□□□ -0.23
GCN1-202ENST00000547263 POLR2AP24928 1970 aaKnown RBP13.62□□□□□ -0.23
GCN1-202ENST00000547263 G3V3G9 751 aa13.61□□□□□ -0.23
GCN1-202ENST00000547263 H7C1D1 291 aa13.61□□□□□ -0.23
GCN1-202ENST00000547263 PLIN1O60240 522 aa13.61□□□□□ -0.23
GCN1-202ENST00000547263 HIBADHP31937 336 aaKnown RBP13.61□□□□□ -0.23
GCN1-202ENST00000547263 DCAF8Q5TAQ9 597 aa13.61□□□□□ -0.23
GCN1-202ENST00000547263 TTLL5Q6EMB2 1281 aa13.61□□□□□ -0.23
GCN1-202ENST00000547263 CEP85Q6P2H3 762 aa13.61□□□□□ -0.23
GCN1-202ENST00000547263 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.61□□□□□ -0.23
GCN1-202ENST00000547263 USP17L8P0C7I0 530 aa13.6□□□□□ -0.23
GCN1-202ENST00000547263 GYG1P46976 350 aa13.6□□□□□ -0.23
GCN1-202ENST00000547263 APLP1P51693 650 aa13.6□□□□□ -0.23
GCN1-202ENST00000547263 GTF2IP78347 998 aa13.6□□□□□ -0.23
GCN1-202ENST00000547263 EAPPQ56P03 285 aaPredicted RBP13.6□□□□□ -0.23
GCN1-202ENST00000547263 C20orf194Q5TEA3 1177 aa13.6□□□□□ -0.23
GCN1-202ENST00000547263 SAMD7Q7Z3H4 446 aa13.6□□□□□ -0.23
GCN1-202ENST00000547263 CEP126Q9P2H0 1117 aa13.6□□□□□ -0.23
GCN1-202ENST00000547263 COL1A1P02452 1464 aaPredicted RBP13.6□□□□□ -0.23
GCN1-202ENST00000547263 IFIT1P09914 478 aaKnown RBP13.59□□□□□ -0.23
GCN1-202ENST00000547263 MAP1SQ66K74 1059 aaPredicted RBP13.59□□□□□ -0.23
GCN1-202ENST00000547263 CNTROBQ8N137 903 aa13.59□□□□□ -0.23
GCN1-202ENST00000547263 DNAJC5GQ8N7S2 189 aa13.59□□□□□ -0.23
GCN1-202ENST00000547263 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.59□□□□□ -0.23
GCN1-202ENST00000547263 MTMR14Q8NCE2 650 aa13.59□□□□□ -0.23
GCN1-202ENST00000547263 MXD3Q9BW11 206 aa13.59□□□□□ -0.23
GCN1-202ENST00000547263 SIL1Q9H173 461 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms