RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 ATP2B3Q16720 1220 aa28.6■■■□□ 2.17
SMARCD1-203ENST00000547247 KIF1BPQ96EK5 621 aa28.6■■■□□ 2.17
SMARCD1-203ENST00000547247 SLC5A1P13866 664 aa28.59■■■□□ 2.17
SMARCD1-203ENST00000547247 KLRK1P26718 216 aa28.59■■■□□ 2.17
SMARCD1-203ENST00000547247 TXNRD3Q86VQ6 643 aa28.59■■■□□ 2.17
SMARCD1-203ENST00000547247 RHPN1Q8TCX5 695 aa28.59■■■□□ 2.17
SMARCD1-203ENST00000547247 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.59■■■□□ 2.17
SMARCD1-203ENST00000547247 DICER1Q9UPY3 1922 aaKnown RBP28.59■■■□□ 2.17
SMARCD1-203ENST00000547247 APBB1O00213 710 aa28.58■■■□□ 2.17
SMARCD1-203ENST00000547247 GPR108Q9NPR9 543 aa28.58■■■□□ 2.17
SMARCD1-203ENST00000547247 G3V3G9 751 aa28.58■■■□□ 2.17
SMARCD1-203ENST00000547247 DCAF8Q5TAQ9 597 aa28.58■■■□□ 2.17
SMARCD1-203ENST00000547247 NIM1KQ8IY84 436 aa28.58■■■□□ 2.17
SMARCD1-203ENST00000547247 IRS2Q9Y4H2 1338 aa28.57■■■□□ 2.16
SMARCD1-203ENST00000547247 TIAM2Q8IVF5 1701 aa28.57■■■□□ 2.16
SMARCD1-203ENST00000547247 A0A1B0GUL7 405 aa28.57■■■□□ 2.16
SMARCD1-203ENST00000547247 TIMM10P62072 90 aa28.56■■■□□ 2.16
SMARCD1-203ENST00000547247 DOK7Q18PE1 504 aa28.56■■■□□ 2.16
SMARCD1-203ENST00000547247 TNNI3KQ59H18 835 aa28.55■■■□□ 2.16
SMARCD1-203ENST00000547247 ZNF804AQ7Z570 1209 aa28.55■■■□□ 2.16
SMARCD1-203ENST00000547247 GCC1Q96CN9 775 aa28.55■■■□□ 2.16
SMARCD1-203ENST00000547247 LRRCC1Q9C099 1032 aa28.55■■■□□ 2.16
SMARCD1-203ENST00000547247 DBNDD1Q9H9R9 158 aa28.55■■■□□ 2.16
SMARCD1-203ENST00000547247 FPGT-TNNI3KV9GXZ4 949 aa28.55■■■□□ 2.16
SMARCD1-203ENST00000547247 COL4A5P29400 1685 aa28.55■■■□□ 2.16
SMARCD1-203ENST00000547247 IGHDP01880 384 aa28.54■■■□□ 2.16
SMARCD1-203ENST00000547247 CAVIN4Q5BKX8 364 aa28.54■■■□□ 2.16
SMARCD1-203ENST00000547247 NEUROD6Q96NK8 337 aa28.54■■■□□ 2.16
SMARCD1-203ENST00000547247 COA1Q9GZY4 146 aa28.54■■■□□ 2.16
SMARCD1-203ENST00000547247 ZNF609O15014 1411 aa28.54■■■□□ 2.16
SMARCD1-203ENST00000547247 FAM84BQ96KN1 310 aaPredicted RBP28.54■■■□□ 2.16
SMARCD1-203ENST00000547247 IL1RAPL2Q9NP60 686 aa28.54■■■□□ 2.16
SMARCD1-203ENST00000547247 ZNRF3Q9ULT6 936 aa28.54■■■□□ 2.16
SMARCD1-203ENST00000547247 ECE2O60344 883 aa28.53■■■□□ 2.16
SMARCD1-203ENST00000547247 HIBADHP31937 336 aaKnown RBP28.53■■■□□ 2.16
SMARCD1-203ENST00000547247 GYG1P46976 350 aa28.53■■■□□ 2.16
SMARCD1-203ENST00000547247 PODNQ7Z5L7 613 aa28.52■■■□□ 2.16
SMARCD1-203ENST00000547247 VPS37DQ86XT2 251 aa28.52■■■□□ 2.16
SMARCD1-203ENST00000547247 CLASRPQ8N2M8 674 aaKnown RBP28.52■■■□□ 2.16
SMARCD1-203ENST00000547247 ZNF784Q8NCA9 323 aaPredicted RBP28.52■■■□□ 2.16
SMARCD1-203ENST00000547247 ZC3H4Q9UPT8 1303 aaKnown RBP28.52■■■□□ 2.16
SMARCD1-203ENST00000547247 FZD9O00144 591 aa28.51■■■□□ 2.15
SMARCD1-203ENST00000547247 ERICH6BQ5W0A0 696 aa28.51■■■□□ 2.15
SMARCD1-203ENST00000547247 FBXO33Q7Z6M2 555 aa28.51■■■□□ 2.15
SMARCD1-203ENST00000547247 XAGE2Q96GT9 111 aa28.51■■■□□ 2.15
SMARCD1-203ENST00000547247 EAF2Q96CJ1 260 aaPredicted RBP28.5■■■□□ 2.15
SMARCD1-203ENST00000547247 CD209Q9NNX6 404 aa28.5■■■□□ 2.15
SMARCD1-203ENST00000547247 ADORA1P30542 326 aa28.5■■■□□ 2.15
SMARCD1-203ENST00000547247 BCAMP50895 628 aa28.5■■■□□ 2.15
SMARCD1-203ENST00000547247 SMC5Q8IY18 1101 aa28.5■■■□□ 2.15
SMARCD1-203ENST00000547247 YDJCA8MPS7 323 aa28.49■■■□□ 2.15
SMARCD1-203ENST00000547247 EIF6P56537 245 aaKnown RBP28.49■■■□□ 2.15
SMARCD1-203ENST00000547247 GORABQ5T7V8 394 aa28.49■■■□□ 2.15
SMARCD1-203ENST00000547247 AACSQ86V21 672 aa28.49■■■□□ 2.15
SMARCD1-203ENST00000547247 BCL11AQ9H165 835 aa28.49■■■□□ 2.15
SMARCD1-203ENST00000547247 SMARCA5O60264 1052 aaPredicted RBP28.48■■■□□ 2.15
SMARCD1-203ENST00000547247 ZNF526Q8TF50 670 aaPredicted RBP28.48■■■□□ 2.15
SMARCD1-203ENST00000547247 CCDC8Q9H0W5 538 aaPredicted RBP28.48■■■□□ 2.15
SMARCD1-203ENST00000547247 ARAP2Q8WZ64 1704 aa28.48■■■□□ 2.15
SMARCD1-203ENST00000547247 IL1R1P14778 569 aa28.47■■■□□ 2.15
SMARCD1-203ENST00000547247 ZBTB47Q9UFB7 747 aaPredicted RBP28.47■■■□□ 2.15
SMARCD1-203ENST00000547247 ANKRD45Q5TZF3 282 aa28.46■■■□□ 2.15
SMARCD1-203ENST00000547247 CCDC102BQ68D86 513 aa28.46■■■□□ 2.15
SMARCD1-203ENST00000547247 DBNDD2Q9BQY9 259 aa28.46■■■□□ 2.15
SMARCD1-203ENST00000547247 TDRD7Q8NHU6 1098 aaKnown RBP28.45■■■□□ 2.15
SMARCD1-203ENST00000547247 GNL3LQ9NVN8 582 aaKnown RBP28.45■■■□□ 2.15
SMARCD1-203ENST00000547247 DBNLQ9UJU6 430 aaKnown RBP28.45■■■□□ 2.15
SMARCD1-203ENST00000547247 IFIT2P09913 472 aaKnown RBP28.45■■■□□ 2.14
SMARCD1-203ENST00000547247 PHKA1P46020 1223 aa28.45■■■□□ 2.14
SMARCD1-203ENST00000547247 CXCL9Q07325 125 aa28.45■■■□□ 2.14
SMARCD1-203ENST00000547247 CIAPIN1Q6FI81 312 aa28.45■■■□□ 2.14
SMARCD1-203ENST00000547247 DPY19L2Q6NUT2 758 aa28.45■■■□□ 2.14
SMARCD1-203ENST00000547247 KCNQ5Q9NR82 932 aa28.45■■■□□ 2.14
SMARCD1-203ENST00000547247 FRAT2O75474 233 aaPredicted RBP28.44■■■□□ 2.14
SMARCD1-203ENST00000547247 RAD17O75943 681 aa28.44■■■□□ 2.14
SMARCD1-203ENST00000547247 TLR7Q9NYK1 1049 aaKnown RBP28.44■■■□□ 2.14
SMARCD1-203ENST00000547247 ZNF541Q9H0D2 1346 aa28.43■■■□□ 2.14
SMARCD1-203ENST00000547247 CCDC158Q5M9N0 1113 aa28.43■■■□□ 2.14
SMARCD1-203ENST00000547247 IQSEC3Q9UPP2 1182 aaPredicted RBP28.43■■■□□ 2.14
SMARCD1-203ENST00000547247 TNIP1Q15025 636 aa28.42■■■□□ 2.14
SMARCD1-203ENST00000547247 B4GALNT3Q6L9W6 998 aa28.42■■■□□ 2.14
SMARCD1-203ENST00000547247 CCDC136Q96JN2 1154 aa28.42■■■□□ 2.14
SMARCD1-203ENST00000547247 USP17L3A6NCW0 530 aa28.41■■■□□ 2.14
SMARCD1-203ENST00000547247 USP17L4A6NCW7 530 aa28.41■■■□□ 2.14
SMARCD1-203ENST00000547247 TTLL5Q6EMB2 1281 aa28.41■■■□□ 2.14
SMARCD1-203ENST00000547247 USP17L1Q7RTZ2 530 aa28.41■■■□□ 2.14
SMARCD1-203ENST00000547247 GPBP1L1Q9HC44 474 aaPredicted RBP28.41■■■□□ 2.14
SMARCD1-203ENST00000547247 SCN9AQ15858 1988 aa28.41■■■□□ 2.14
SMARCD1-203ENST00000547247 GTF2IP78347 998 aa28.41■■■□□ 2.14
SMARCD1-203ENST00000547247 STRIP1Q5VSL9 837 aa28.41■■■□□ 2.14
SMARCD1-203ENST00000547247 GLTPD2A6NH11 291 aa28.4■■■□□ 2.14
SMARCD1-203ENST00000547247 PSMD14O00487 310 aa28.4■■■□□ 2.14
SMARCD1-203ENST00000547247 TTC39AQ5SRH9 613 aa28.4■■■□□ 2.14
SMARCD1-203ENST00000547247 GPC2Q8N158 579 aa28.4■■■□□ 2.14
SMARCD1-203ENST00000547247 FBXW7Q969H0 707 aa28.4■■■□□ 2.14
SMARCD1-203ENST00000547247 GJA3Q9Y6H8 435 aa28.4■■■□□ 2.14
SMARCD1-203ENST00000547247 SEMA3EO15041 775 aa28.39■■■□□ 2.14
SMARCD1-203ENST00000547247 UQCRFS1P1P0C7P4 283 aa28.39■■■□□ 2.14
SMARCD1-203ENST00000547247 ZBTB22O15209 634 aa28.38■■■□□ 2.13
SMARCD1-203ENST00000547247 DDNO94850 711 aaPredicted RBP28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms