RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 RARSP54136 660 aaKnown RBP16.97■□□□□ 0.31
RAB5B-203ENST00000546810 GPSM2P81274 684 aa16.97■□□□□ 0.31
RAB5B-203ENST00000546810 PI4KAP1Q8N8J0 262 aa16.97■□□□□ 0.31
RAB5B-203ENST00000546810 METTL22Q9BUU2 404 aaPredicted RBP16.97■□□□□ 0.31
RAB5B-203ENST00000546810 MAP3K2Q9Y2U5 619 aa16.97■□□□□ 0.31
RAB5B-203ENST00000546810 PTPRCP08575 1304 aa16.96■□□□□ 0.31
RAB5B-203ENST00000546810 UBE2Q2LH0YL09 131 aa16.96■□□□□ 0.31
RAB5B-203ENST00000546810 ZNF280AP59817 542 aaPredicted RBP16.96■□□□□ 0.31
RAB5B-203ENST00000546810 CELF1Q92879 486 aaKnown RBP16.96■□□□□ 0.31
RAB5B-203ENST00000546810 TBC1D16Q8TBP0 767 aa16.95■□□□□ 0.3
RAB5B-203ENST00000546810 MYD88Q99836 296 aa16.95■□□□□ 0.3
RAB5B-203ENST00000546810 KIF16BQ96L93 1317 aa16.95■□□□□ 0.3
RAB5B-203ENST00000546810 PITPNM2Q9BZ72 1349 aa16.95■□□□□ 0.3
RAB5B-203ENST00000546810 POTEFA5A3E0 1075 aa16.94■□□□□ 0.3
RAB5B-203ENST00000546810 G3V3G9 751 aa16.94■□□□□ 0.3
RAB5B-203ENST00000546810 SREBF2Q12772 1141 aa16.94■□□□□ 0.3
RAB5B-203ENST00000546810 MKRN3Q13064 507 aaKnown RBP16.94■□□□□ 0.3
RAB5B-203ENST00000546810 TRIM28Q13263 835 aaKnown RBP16.94■□□□□ 0.3
RAB5B-203ENST00000546810 DCAF8Q5TAQ9 597 aa16.94■□□□□ 0.3
RAB5B-203ENST00000546810 INTS3Q68E01 1043 aaKnown RBP16.94■□□□□ 0.3
RAB5B-203ENST00000546810 DNAAF4Q8WXU2 420 aa16.94■□□□□ 0.3
RAB5B-203ENST00000546810 ISCA1Q9BUE6 129 aa16.94■□□□□ 0.3
RAB5B-203ENST00000546810 CFHR5Q9BXR6 569 aa16.94■□□□□ 0.3
RAB5B-203ENST00000546810 ZC3H12CQ9C0D7 883 aaKnown RBP16.94■□□□□ 0.3
RAB5B-203ENST00000546810 TAF1P21675 1872 aa16.94■□□□□ 0.3
RAB5B-203ENST00000546810 ATP5J2-PTCD1G3V325 749 aa16.93■□□□□ 0.3
RAB5B-203ENST00000546810 IPO8O15397 1037 aaKnown RBP16.93■□□□□ 0.3
RAB5B-203ENST00000546810 TTLL12Q14166 644 aaPredicted RBP16.93■□□□□ 0.3
RAB5B-203ENST00000546810 RSBN1LQ6PCB5 846 aaPredicted RBP16.93■□□□□ 0.3
RAB5B-203ENST00000546810 CCDC191Q8NCU4 936 aa16.93■□□□□ 0.3
RAB5B-203ENST00000546810 AGBL3Q8NEM8 1001 aa16.93■□□□□ 0.3
RAB5B-203ENST00000546810 R3HDMLQ9H3Y0 253 aa16.93■□□□□ 0.3
RAB5B-203ENST00000546810 SCAF8Q9UPN6 1271 aaKnown RBP16.93■□□□□ 0.3
RAB5B-203ENST00000546810 DDX60Q8IY21 1712 aaKnown RBP16.93■□□□□ 0.3
RAB5B-203ENST00000546810 SF3B3Q15393 1217 aaKnown RBP16.92■□□□□ 0.3
RAB5B-203ENST00000546810 MYOZ2Q9NPC6 264 aa16.92■□□□□ 0.3
RAB5B-203ENST00000546810 CWC25Q9NXE8 425 aaPredicted RBP16.92■□□□□ 0.3
RAB5B-203ENST00000546810 ZNF609O15014 1411 aa16.92■□□□□ 0.3
RAB5B-203ENST00000546810 PRAMEF18Q5VWM3 479 aa16.91■□□□□ 0.3
RAB5B-203ENST00000546810 API5Q9BZZ5 524 aaKnown RBP16.91■□□□□ 0.3
RAB5B-203ENST00000546810 NOB1Q9ULX3 412 aaKnown RBP16.91■□□□□ 0.3
RAB5B-203ENST00000546810 TRIM17Q9Y577 477 aa16.91■□□□□ 0.3
RAB5B-203ENST00000546810 F6X3S4 739 aa16.9■□□□□ 0.3
RAB5B-203ENST00000546810 USP17L8P0C7I0 530 aa16.9■□□□□ 0.3
RAB5B-203ENST00000546810 HSP90B1P14625 803 aaKnown RBP16.9■□□□□ 0.3
RAB5B-203ENST00000546810 SLC4A10Q6U841 1118 aa16.9■□□□□ 0.3
RAB5B-203ENST00000546810 LINS1Q8NG48 757 aa16.9■□□□□ 0.3
RAB5B-203ENST00000546810 ARHGAP45Q92619 1136 aa16.9■□□□□ 0.3
RAB5B-203ENST00000546810 SCN9AQ15858 1988 aa16.89■□□□□ 0.3
RAB5B-203ENST00000546810 BCAR3O75815 825 aa16.89■□□□□ 0.29
RAB5B-203ENST00000546810 NF2P35240 595 aa16.89■□□□□ 0.29
RAB5B-203ENST00000546810 FAM89AQ96GI7 184 aa16.89■□□□□ 0.29
RAB5B-203ENST00000546810 GMLQ99445 158 aa16.89■□□□□ 0.29
RAB5B-203ENST00000546810 PODXL2Q9NZ53 605 aa16.89■□□□□ 0.29
RAB5B-203ENST00000546810 COL4A1P02462 1669 aa16.88■□□□□ 0.29
RAB5B-203ENST00000546810 MKI67P46013 3256 aaKnown RBP16.88■□□□□ 0.29
RAB5B-203ENST00000546810 NEURL1BA8MQ27 555 aa16.88■□□□□ 0.29
RAB5B-203ENST00000546810 UFL1O94874 794 aa16.88■□□□□ 0.29
RAB5B-203ENST00000546810 ALDH1A1P00352 501 aa16.88■□□□□ 0.29
RAB5B-203ENST00000546810 IGKV5-2P06315 115 aa16.88■□□□□ 0.29
RAB5B-203ENST00000546810 RPS8P62241 208 aaKnown RBP16.88■□□□□ 0.29
RAB5B-203ENST00000546810 OTOP1Q7RTM1 612 aa16.88■□□□□ 0.29
RAB5B-203ENST00000546810 FRAT1Q92837 279 aaPredicted RBP16.88■□□□□ 0.29
RAB5B-203ENST00000546810 SRCIN1Q9C0H9 1055 aa16.88■□□□□ 0.29
RAB5B-203ENST00000546810 RCAN3Q9UKA8 241 aa16.88■□□□□ 0.29
RAB5B-203ENST00000546810 COLQQ9Y215 455 aaPredicted RBP16.88■□□□□ 0.29
RAB5B-203ENST00000546810 ALDH1L1O75891 902 aa16.87■□□□□ 0.29
RAB5B-203ENST00000546810 CWF19L2Q2TBE0 894 aaKnown RBP16.87■□□□□ 0.29
RAB5B-203ENST00000546810 BEND3Q5T5X7 828 aa16.87■□□□□ 0.29
RAB5B-203ENST00000546810 ZBTB38Q8NAP3 1195 aaPredicted RBP16.87■□□□□ 0.29
RAB5B-203ENST00000546810 ANKIB1Q9P2G1 1089 aa16.87■□□□□ 0.29
RAB5B-203ENST00000546810 GGA1Q9UJY5 639 aa16.87■□□□□ 0.29
RAB5B-203ENST00000546810 PCCAP05165 728 aaPredicted RBP16.86■□□□□ 0.29
RAB5B-203ENST00000546810 EN2P19622 333 aaPredicted RBP16.86■□□□□ 0.29
RAB5B-203ENST00000546810 PTPN12Q05209 780 aaKnown RBP16.86■□□□□ 0.29
RAB5B-203ENST00000546810 NBPF9Q3BBW0 867 aa16.86■□□□□ 0.29
RAB5B-203ENST00000546810 ZKSCAN2Q63HK3 967 aa16.86■□□□□ 0.29
RAB5B-203ENST00000546810 ARMC9Q7Z3E5 817 aa16.86■□□□□ 0.29
RAB5B-203ENST00000546810 USP17L3A6NCW0 530 aa16.85■□□□□ 0.29
RAB5B-203ENST00000546810 USP17L4A6NCW7 530 aa16.85■□□□□ 0.29
RAB5B-203ENST00000546810 CCT4P50991 539 aaKnown RBP16.85■□□□□ 0.29
RAB5B-203ENST00000546810 GCKRQ14397 625 aa16.85■□□□□ 0.29
RAB5B-203ENST00000546810 SPRYD7Q5W111 196 aa16.85■□□□□ 0.29
RAB5B-203ENST00000546810 ATF7IPQ6VMQ6 1270 aa16.85■□□□□ 0.29
RAB5B-203ENST00000546810 USP17L1Q7RTZ2 530 aa16.85■□□□□ 0.29
RAB5B-203ENST00000546810 CACNA1FO60840 1977 aa16.85■□□□□ 0.29
RAB5B-203ENST00000546810 IRS4O14654 1257 aaPredicted RBP16.84■□□□□ 0.29
RAB5B-203ENST00000546810 PRKG1Q13976 671 aa16.84■□□□□ 0.29
RAB5B-203ENST00000546810 RTL5Q5HYW3 569 aaPredicted RBP16.84■□□□□ 0.29
RAB5B-203ENST00000546810 C9orf78Q9NZ63 289 aaPredicted RBP16.84■□□□□ 0.29
RAB5B-203ENST00000546810 PTPN22Q9Y2R2 807 aa16.84■□□□□ 0.29
RAB5B-203ENST00000546810 MS4A1P11836 297 aa16.83■□□□□ 0.28
RAB5B-203ENST00000546810 INHBEP58166 350 aa16.83■□□□□ 0.28
RAB5B-203ENST00000546810 IFNL1Q8IU54 200 aa16.83■□□□□ 0.28
RAB5B-203ENST00000546810 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.83■□□□□ 0.28
RAB5B-203ENST00000546810 ARMC5Q96C12 935 aa16.83■□□□□ 0.28
RAB5B-203ENST00000546810 ERO1AQ96HE7 468 aa16.83■□□□□ 0.28
RAB5B-203ENST00000546810 HTTP42858 3142 aa16.82■□□□□ 0.28
RAB5B-203ENST00000546810 MANSC4A6NHS7 340 aaPredicted RBP16.82■□□□□ 0.28
RAB5B-203ENST00000546810 H7C1W4 665 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms