RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 ANKRD18BA2A2Z9 1011 aa14.56□□□□□ -0.08
PTCH1-212ENST00000546744 ELF2Q15723 593 aa14.56□□□□□ -0.08
PTCH1-212ENST00000546744 DNAJC5Q9H3Z4 198 aa14.56□□□□□ -0.08
PTCH1-212ENST00000546744 CCDC61Q9Y6R9 512 aa14.56□□□□□ -0.08
PTCH1-212ENST00000546744 SPTLC2O15270 562 aa14.56□□□□□ -0.08
PTCH1-212ENST00000546744 NAA25Q14CX7 972 aa14.56□□□□□ -0.08
PTCH1-212ENST00000546744 TMEM266Q2M3C6 531 aa14.56□□□□□ -0.08
PTCH1-212ENST00000546744 MADDQ8WXG6 1647 aa14.55□□□□□ -0.08
PTCH1-212ENST00000546744 CETN1Q12798 172 aa14.55□□□□□ -0.08
PTCH1-212ENST00000546744 RHPN1Q8TCX5 695 aa14.55□□□□□ -0.08
PTCH1-212ENST00000546744 GOPCQ9HD26 462 aa14.55□□□□□ -0.08
PTCH1-212ENST00000546744 IFNKQ9P0W0 207 aa14.55□□□□□ -0.08
PTCH1-212ENST00000546744 MROH1Q8NDA8 1641 aa14.55□□□□□ -0.08
PTCH1-212ENST00000546744 FKBP4Q02790 459 aaKnown RBP eCLIP14.55□□□□□ -0.08
PTCH1-212ENST00000546744 TMTC2Q8N394 836 aa14.55□□□□□ -0.08
PTCH1-212ENST00000546744 ADGRB3O60242 1522 aa14.55□□□□□ -0.08
PTCH1-212ENST00000546744 GOLGA8AA7E2F4 631 aa14.55□□□□□ -0.08
PTCH1-212ENST00000546744 EFCAB8A8MWE9 144 aa14.55□□□□□ -0.08
PTCH1-212ENST00000546744 NUTM2GQ5VZR2 741 aa14.55□□□□□ -0.08
PTCH1-212ENST00000546744 ZNF530Q6P9A1 599 aaPredicted RBP14.55□□□□□ -0.08
PTCH1-212ENST00000546744 PLEKHM2Q8IWE5 1019 aa14.55□□□□□ -0.08
PTCH1-212ENST00000546744 NCOA7Q8NI08 942 aa14.55□□□□□ -0.08
PTCH1-212ENST00000546744 NAPGQ99747 312 aaPredicted RBP14.55□□□□□ -0.08
PTCH1-212ENST00000546744 BOLA2Q9H3K6 86 aa14.55□□□□□ -0.08
PTCH1-212ENST00000546744 TCP11L1Q9NUJ3 509 aa14.55□□□□□ -0.08
PTCH1-212ENST00000546744 SPG7Q9UQ90 795 aa14.55□□□□□ -0.08
PTCH1-212ENST00000546744 PSMA7O14818 248 aa14.55□□□□□ -0.08
PTCH1-212ENST00000546744 BRD1O95696 1058 aa14.55□□□□□ -0.08
PTCH1-212ENST00000546744 RUFY4Q6ZNE9 571 aa14.55□□□□□ -0.08
PTCH1-212ENST00000546744 LLPHQ9BRT6 129 aaKnown RBP14.55□□□□□ -0.08
PTCH1-212ENST00000546744 LUC7L2Q9Y383 392 aaKnown RBP14.55□□□□□ -0.08
PTCH1-212ENST00000546744 BLMP54132 1417 aaPredicted RBP14.54□□□□□ -0.08
PTCH1-212ENST00000546744 OAS2P29728 719 aaKnown RBP14.54□□□□□ -0.08
PTCH1-212ENST00000546744 ZGPATQ8N5A5 531 aaKnown RBP14.54□□□□□ -0.08
PTCH1-212ENST00000546744 NUDT16Q96DE0 195 aaKnown RBP14.54□□□□□ -0.08
PTCH1-212ENST00000546744 RBM42Q9BTD8 480 aaKnown RBP14.54□□□□□ -0.08
PTCH1-212ENST00000546744 DBF4Q9UBU7 674 aaPredicted RBP14.54□□□□□ -0.08
PTCH1-212ENST00000546744 AMOTL2Q9Y2J4 779 aa14.54□□□□□ -0.08
PTCH1-212ENST00000546744 SSH2Q76I76 1423 aa14.54□□□□□ -0.08
PTCH1-212ENST00000546744 BCORL1Q5H9F3 1711 aa14.54□□□□□ -0.08
PTCH1-212ENST00000546744 IFIT1P09914 478 aaKnown RBP14.54□□□□□ -0.08
PTCH1-212ENST00000546744 IBSPP21815 317 aaPredicted RBP14.54□□□□□ -0.08
PTCH1-212ENST00000546744 DAAM2Q86T65 1068 aa14.54□□□□□ -0.08
PTCH1-212ENST00000546744 IQCA1Q86XH1 822 aa14.54□□□□□ -0.08
PTCH1-212ENST00000546744 PLCD3Q8N3E9 789 aa14.54□□□□□ -0.08
PTCH1-212ENST00000546744 TRIM7Q9C029 511 aa14.54□□□□□ -0.08
PTCH1-212ENST00000546744 AGLP35573 1532 aa14.54□□□□□ -0.08
PTCH1-212ENST00000546744 GOLGA6CA6NDK9 693 aa14.54□□□□□ -0.08
PTCH1-212ENST00000546744 WASLO00401 505 aaPredicted RBP14.54□□□□□ -0.08
PTCH1-212ENST00000546744 PPFIA4O75335 1185 aa14.54□□□□□ -0.08
PTCH1-212ENST00000546744 GOLGA6DP0CG33 693 aa14.54□□□□□ -0.08
PTCH1-212ENST00000546744 CLNS1AP54105 237 aaKnown RBP14.54□□□□□ -0.08
PTCH1-212ENST00000546744 GOLGA6AQ9NYA3 693 aa14.54□□□□□ -0.08
PTCH1-212ENST00000546744 AKR1B15C9JRZ8 316 aaPredicted RBP14.53□□□□□ -0.08
PTCH1-212ENST00000546744 LMOD1P29536 600 aaPredicted RBP14.53□□□□□ -0.08
PTCH1-212ENST00000546744 SLC8A1P32418 973 aa14.53□□□□□ -0.08
PTCH1-212ENST00000546744 ATP8B2P98198 1209 aa14.53□□□□□ -0.08
PTCH1-212ENST00000546744 RBM8AQ9Y5S9 174 aaKnown RBP14.53□□□□□ -0.08
PTCH1-212ENST00000546744 WDHD1O75717 1129 aaPredicted RBP14.53□□□□□ -0.08
PTCH1-212ENST00000546744 BRF1Q92994 677 aa14.53□□□□□ -0.08
PTCH1-212ENST00000546744 KIF24Q5T7B8 1368 aa14.53□□□□□ -0.08
PTCH1-212ENST00000546744 ATP5DP30049 168 aa14.53□□□□□ -0.08
PTCH1-212ENST00000546744 SETDB1Q15047 1291 aa14.53□□□□□ -0.08
PTCH1-212ENST00000546744 ZNF569Q5MCW4 686 aa14.53□□□□□ -0.08
PTCH1-212ENST00000546744 ZNF622Q969S3 477 aaKnown RBP eCLIP14.53□□□□□ -0.08
PTCH1-212ENST00000546744 MRFAP1L1Q96HT8 127 aa14.53□□□□□ -0.08
PTCH1-212ENST00000546744 PSDA5PKW4 1024 aaPredicted RBP14.52□□□□□ -0.08
PTCH1-212ENST00000546744 TMCO5BA8MYB1 307 aa14.52□□□□□ -0.08
PTCH1-212ENST00000546744 MRPL50Q8N5N7 158 aaKnown RBP14.52□□□□□ -0.08
PTCH1-212ENST00000546744 NAPBQ9H115 298 aa14.52□□□□□ -0.08
PTCH1-212ENST00000546744 SEPT11Q9NVA2 429 aaKnown RBP14.52□□□□□ -0.08
PTCH1-212ENST00000546744 TATP17735 454 aaPredicted RBP14.52□□□□□ -0.08
PTCH1-212ENST00000546744 TTF1Q15361 905 aaPredicted RBP14.52□□□□□ -0.08
PTCH1-212ENST00000546744 CCDC96Q2M329 555 aa14.52□□□□□ -0.08
PTCH1-212ENST00000546744 CEP128Q6ZU80 1094 aa14.52□□□□□ -0.08
PTCH1-212ENST00000546744 IQCDQ96DY2 449 aa14.52□□□□□ -0.08
PTCH1-212ENST00000546744 CEP63Q96MT8 703 aa14.52□□□□□ -0.08
PTCH1-212ENST00000546744 ARHGEF40Q8TER5 1519 aa14.52□□□□□ -0.08
PTCH1-212ENST00000546744 TMEM2Q9UHN6 1383 aa14.52□□□□□ -0.09
PTCH1-212ENST00000546744 KIF3CO14782 793 aa14.52□□□□□ -0.09
PTCH1-212ENST00000546744 UBA7P41226 1012 aa14.52□□□□□ -0.09
PTCH1-212ENST00000546744 FCHSD1Q86WN1 690 aa14.52□□□□□ -0.09
PTCH1-212ENST00000546744 LRRC45Q96CN5 670 aa14.52□□□□□ -0.09
PTCH1-212ENST00000546744 VCXQ9H320 206 aa14.52□□□□□ -0.09
PTCH1-212ENST00000546744 NBPF7P0C2Y1 421 aaPredicted RBP14.52□□□□□ -0.09
PTCH1-212ENST00000546744 AK2P54819 239 aa14.52□□□□□ -0.09
PTCH1-212ENST00000546744 ATP11AP98196 1134 aa14.52□□□□□ -0.09
PTCH1-212ENST00000546744 CCDC38Q502W7 563 aa14.52□□□□□ -0.09
PTCH1-212ENST00000546744 CALML4Q96GE6 196 aa14.52□□□□□ -0.09
PTCH1-212ENST00000546744 TRIM47Q96LD4 638 aa14.52□□□□□ -0.09
PTCH1-212ENST00000546744 DRC1Q96MC2 740 aa14.52□□□□□ -0.09
PTCH1-212ENST00000546744 ALDH3A1P30838 453 aa14.51□□□□□ -0.09
PTCH1-212ENST00000546744 GUCY1B3Q02153 619 aa14.51□□□□□ -0.09
PTCH1-212ENST00000546744 TSNAXIP1Q2TAA8 658 aa14.51□□□□□ -0.09
PTCH1-212ENST00000546744 CCDC42Q96M95 316 aa14.51□□□□□ -0.09
PTCH1-212ENST00000546744 SCLT1Q96NL6 688 aa14.51□□□□□ -0.09
PTCH1-212ENST00000546744 ZHX3Q9H4I2 956 aa14.51□□□□□ -0.09
PTCH1-212ENST00000546744 CCDC194A0A1B0GVG4 234 aa14.51□□□□□ -0.09
PTCH1-212ENST00000546744 EFCAB13Q8IY85 973 aa14.51□□□□□ -0.09
PTCH1-212ENST00000546744 CACNA2D3Q8IZS8 1091 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms