RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 YDJCA8MPS7 323 aa25.73■■□□□ 1.71
SCARB1-211ENST00000546215 YY1P25490 414 aa25.73■■□□□ 1.71
SCARB1-211ENST00000546215 EXOC6BQ9Y2D4 811 aa25.73■■□□□ 1.71
SCARB1-211ENST00000546215 ECE2O60344 883 aa25.72■■□□□ 1.71
SCARB1-211ENST00000546215 OS9Q13438 667 aaPredicted RBP25.72■■□□□ 1.71
SCARB1-211ENST00000546215 LPIN2Q92539 896 aa25.71■■□□□ 1.71
SCARB1-211ENST00000546215 COA1Q9GZY4 146 aa25.71■■□□□ 1.71
SCARB1-211ENST00000546215 ZNF541Q9H0D2 1346 aa25.71■■□□□ 1.71
SCARB1-211ENST00000546215 G3V3G9 751 aa25.7■■□□□ 1.71
SCARB1-211ENST00000546215 ATP2B3Q16720 1220 aa25.7■■□□□ 1.71
SCARB1-211ENST00000546215 DCAF8Q5TAQ9 597 aa25.7■■□□□ 1.71
SCARB1-211ENST00000546215 IFIT1P09914 478 aaKnown RBP25.69■■□□□ 1.7
SCARB1-211ENST00000546215 EIF6P56537 245 aaKnown RBP25.69■■□□□ 1.7
SCARB1-211ENST00000546215 HSP90AB4PQ58FF6 505 aa25.69■■□□□ 1.7
SCARB1-211ENST00000546215 PODNQ7Z5L7 613 aa25.69■■□□□ 1.7
SCARB1-211ENST00000546215 FAM84BQ96KN1 310 aaPredicted RBP25.69■■□□□ 1.7
SCARB1-211ENST00000546215 KCNQ5Q9NR82 932 aa25.69■■□□□ 1.7
SCARB1-211ENST00000546215 GLTPD2A6NH11 291 aa25.69■■□□□ 1.7
SCARB1-211ENST00000546215 SLC5A1P13866 664 aa25.69■■□□□ 1.7
SCARB1-211ENST00000546215 CXCL9Q07325 125 aa25.69■■□□□ 1.7
SCARB1-211ENST00000546215 AKAP2Q9Y2D5 859 aa25.69■■□□□ 1.7
SCARB1-211ENST00000546215 SCN9AQ15858 1988 aa25.68■■□□□ 1.7
SCARB1-211ENST00000546215 GYG1P46976 350 aa25.68■■□□□ 1.7
SCARB1-211ENST00000546215 TIMM10P62072 90 aa25.68■■□□□ 1.7
SCARB1-211ENST00000546215 DPY19L2Q6NUT2 758 aa25.68■■□□□ 1.7
SCARB1-211ENST00000546215 CD209Q9NNX6 404 aa25.68■■□□□ 1.7
SCARB1-211ENST00000546215 RAD17O75943 681 aa25.67■■□□□ 1.7
SCARB1-211ENST00000546215 ZNF804AQ7Z570 1209 aa25.67■■□□□ 1.7
SCARB1-211ENST00000546215 FBXO33Q7Z6M2 555 aa25.67■■□□□ 1.7
SCARB1-211ENST00000546215 ERC1Q8IUD2 1116 aa25.67■■□□□ 1.7
SCARB1-211ENST00000546215 A0A1B0GUL7 405 aa25.66■■□□□ 1.7
SCARB1-211ENST00000546215 DDNO94850 711 aaPredicted RBP25.66■■□□□ 1.7
SCARB1-211ENST00000546215 HIBADHP31937 336 aaKnown RBP25.66■■□□□ 1.7
SCARB1-211ENST00000546215 DCTPP1Q9H773 170 aa25.66■■□□□ 1.7
SCARB1-211ENST00000546215 GPR108Q9NPR9 543 aa25.66■■□□□ 1.7
SCARB1-211ENST00000546215 RAB11FIP3O75154 756 aa25.65■■□□□ 1.7
SCARB1-211ENST00000546215 IL1R1P14778 569 aa25.65■■□□□ 1.7
SCARB1-211ENST00000546215 CIAPIN1Q6FI81 312 aa25.65■■□□□ 1.7
SCARB1-211ENST00000546215 BCAMP50895 628 aa25.65■■□□□ 1.7
SCARB1-211ENST00000546215 CAVIN4Q5BKX8 364 aa25.65■■□□□ 1.7
SCARB1-211ENST00000546215 GPC2Q8N158 579 aa25.65■■□□□ 1.7
SCARB1-211ENST00000546215 RHPN1Q8TCX5 695 aa25.65■■□□□ 1.7
SCARB1-211ENST00000546215 ZNF609O15014 1411 aa25.64■■□□□ 1.7
SCARB1-211ENST00000546215 ADORA1P30542 326 aa25.64■■□□□ 1.69
SCARB1-211ENST00000546215 HDAC1Q13547 482 aaPredicted RBP25.64■■□□□ 1.69
SCARB1-211ENST00000546215 TNNI3KQ59H18 835 aa25.64■■□□□ 1.69
SCARB1-211ENST00000546215 FPGT-TNNI3KV9GXZ4 949 aa25.64■■□□□ 1.69
SCARB1-211ENST00000546215 PSMD14O00487 310 aa25.63■■□□□ 1.69
SCARB1-211ENST00000546215 TNIP1Q15025 636 aa25.63■■□□□ 1.69
SCARB1-211ENST00000546215 VPS37DQ86XT2 251 aa25.63■■□□□ 1.69
SCARB1-211ENST00000546215 TDRD7Q8NHU6 1098 aaKnown RBP25.63■■□□□ 1.69
SCARB1-211ENST00000546215 KIF1BPQ96EK5 621 aa25.63■■□□□ 1.69
SCARB1-211ENST00000546215 GJA3Q9Y6H8 435 aa25.63■■□□□ 1.69
SCARB1-211ENST00000546215 APBB1O00213 710 aa25.62■■□□□ 1.69
SCARB1-211ENST00000546215 ZNF526Q8TF50 670 aaPredicted RBP25.62■■□□□ 1.69
SCARB1-211ENST00000546215 XAGE2Q96GT9 111 aa25.62■■□□□ 1.69
SCARB1-211ENST00000546215 NEUROD6Q96NK8 337 aa25.62■■□□□ 1.69
SCARB1-211ENST00000546215 ARAP2Q8WZ64 1704 aa25.62■■□□□ 1.69
SCARB1-211ENST00000546215 KDM2BQ8NHM5 1336 aa25.62■■□□□ 1.69
SCARB1-211ENST00000546215 PSME4Q14997 1843 aa25.62■■□□□ 1.69
SCARB1-211ENST00000546215 USP17L3A6NCW0 530 aa25.61■■□□□ 1.69
SCARB1-211ENST00000546215 USP17L4A6NCW7 530 aa25.61■■□□□ 1.69
SCARB1-211ENST00000546215 VIL1P09327 827 aaKnown RBP25.61■■□□□ 1.69
SCARB1-211ENST00000546215 USP17L1Q7RTZ2 530 aa25.61■■□□□ 1.69
SCARB1-211ENST00000546215 ZNF784Q8NCA9 323 aaPredicted RBP25.61■■□□□ 1.69
SCARB1-211ENST00000546215 EAF2Q96CJ1 260 aaPredicted RBP25.61■■□□□ 1.69
SCARB1-211ENST00000546215 L3MBTL3Q96JM7 780 aaPredicted RBP25.61■■□□□ 1.69
SCARB1-211ENST00000546215 IL1RAPL2Q9NP60 686 aa25.61■■□□□ 1.69
SCARB1-211ENST00000546215 STRIP1Q5VSL9 837 aa25.6■■□□□ 1.69
SCARB1-211ENST00000546215 TTLL5Q6EMB2 1281 aa25.6■■□□□ 1.69
SCARB1-211ENST00000546215 PHKA1P46020 1223 aa25.59■■□□□ 1.69
SCARB1-211ENST00000546215 GTF2IP78347 998 aa25.59■■□□□ 1.69
SCARB1-211ENST00000546215 POTECB2RU33 542 aa25.58■■□□□ 1.69
SCARB1-211ENST00000546215 DACT2Q5SW24 774 aa25.58■■□□□ 1.69
SCARB1-211ENST00000546215 CCDC102BQ68D86 513 aa25.58■■□□□ 1.69
SCARB1-211ENST00000546215 IQSEC3Q9UPP2 1182 aaPredicted RBP25.58■■□□□ 1.69
SCARB1-211ENST00000546215 ZBTB12Q9Y330 459 aaPredicted RBP25.58■■□□□ 1.69
SCARB1-211ENST00000546215 ZNF646O15015 1829 aaPredicted RBP25.58■■□□□ 1.69
SCARB1-211ENST00000546215 WDR90Q96KV7 1748 aa25.58■■□□□ 1.69
SCARB1-211ENST00000546215 IGHDP01880 384 aa25.57■■□□□ 1.68
SCARB1-211ENST00000546215 LRRCC1Q9C099 1032 aa25.57■■□□□ 1.68
SCARB1-211ENST00000546215 RWDD1Q9H446 243 aaPredicted RBP25.57■■□□□ 1.68
SCARB1-211ENST00000546215 SCNN1DP51172 638 aa25.56■■□□□ 1.68
SCARB1-211ENST00000546215 RSBN1LQ6PCB5 846 aaPredicted RBP25.56■■□□□ 1.68
SCARB1-211ENST00000546215 CLASRPQ8N2M8 674 aaKnown RBP25.56■■□□□ 1.68
SCARB1-211ENST00000546215 DBNDD2Q9BQY9 259 aa25.56■■□□□ 1.68
SCARB1-211ENST00000546215 CCDC8Q9H0W5 538 aaPredicted RBP25.56■■□□□ 1.68
SCARB1-211ENST00000546215 GPBP1L1Q9HC44 474 aaPredicted RBP25.56■■□□□ 1.68
SCARB1-211ENST00000546215 NMRK2Q9NPI5 230 aa25.56■■□□□ 1.68
SCARB1-211ENST00000546215 DBNLQ9UJU6 430 aaKnown RBP25.56■■□□□ 1.68
SCARB1-211ENST00000546215 FAM205AQ6ZU69 1335 aa25.56■■□□□ 1.68
SCARB1-211ENST00000546215 GMPSP49915 693 aaPredicted RBP25.56■■□□□ 1.68
SCARB1-211ENST00000546215 AACSQ86V21 672 aa25.56■■□□□ 1.68
SCARB1-211ENST00000546215 FBXW7Q969H0 707 aa25.56■■□□□ 1.68
SCARB1-211ENST00000546215 RRAGCQ9HB90 399 aa25.56■■□□□ 1.68
SCARB1-211ENST00000546215 TLR7Q9NYK1 1049 aaKnown RBP25.56■■□□□ 1.68
SCARB1-211ENST00000546215 ZBTB22O15209 634 aa25.55■■□□□ 1.68
SCARB1-211ENST00000546215 GORABQ5T7V8 394 aa25.55■■□□□ 1.68
SCARB1-211ENST00000546215 GMLQ99445 158 aa25.55■■□□□ 1.68
SCARB1-211ENST00000546215 MXD3Q9BW11 206 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms