RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 AAMPQ13685 434 aa25.36■■□□□ 1.65
HMGA2-211ENST00000545998 GLTPD2A6NH11 291 aa25.35■■□□□ 1.65
HMGA2-211ENST00000545998 SASH1O94885 1247 aa25.35■■□□□ 1.65
HMGA2-211ENST00000545998 EIF6P56537 245 aaKnown RBP25.35■■□□□ 1.65
HMGA2-211ENST00000545998 COA1Q9GZY4 146 aa25.35■■□□□ 1.65
HMGA2-211ENST00000545998 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.35■■□□□ 1.65
HMGA2-211ENST00000545998 PSME4Q14997 1843 aa25.35■■□□□ 1.65
HMGA2-211ENST00000545998 G3V3G9 751 aa25.35■■□□□ 1.65
HMGA2-211ENST00000545998 IRX6P78412 446 aaPredicted RBP25.35■■□□□ 1.65
HMGA2-211ENST00000545998 DCAF8Q5TAQ9 597 aa25.35■■□□□ 1.65
HMGA2-211ENST00000545998 DPY19L2Q6NUT2 758 aa25.35■■□□□ 1.65
HMGA2-211ENST00000545998 LPIN2Q92539 896 aa25.35■■□□□ 1.65
HMGA2-211ENST00000545998 CXCL9Q07325 125 aa25.34■■□□□ 1.65
HMGA2-211ENST00000545998 OS9Q13438 667 aaPredicted RBP25.34■■□□□ 1.65
HMGA2-211ENST00000545998 ATP2B3Q16720 1220 aa25.34■■□□□ 1.65
HMGA2-211ENST00000545998 PODNQ7Z5L7 613 aa25.34■■□□□ 1.65
HMGA2-211ENST00000545998 EXOC6BQ9Y2D4 811 aa25.34■■□□□ 1.65
HMGA2-211ENST00000545998 ARAP2Q8WZ64 1704 aa25.33■■□□□ 1.65
HMGA2-211ENST00000545998 CENPBP07199 599 aaPredicted RBP25.33■■□□□ 1.65
HMGA2-211ENST00000545998 KCNQ5Q9NR82 932 aa25.33■■□□□ 1.65
HMGA2-211ENST00000545998 DDNO94850 711 aaPredicted RBP25.32■■□□□ 1.64
HMGA2-211ENST00000545998 IFIT1P09914 478 aaKnown RBP25.32■■□□□ 1.64
HMGA2-211ENST00000545998 SLC5A1P13866 664 aa25.32■■□□□ 1.64
HMGA2-211ENST00000545998 ZNF804AQ7Z570 1209 aa25.32■■□□□ 1.64
HMGA2-211ENST00000545998 FAM84BQ96KN1 310 aaPredicted RBP25.32■■□□□ 1.64
HMGA2-211ENST00000545998 CD209Q9NNX6 404 aa25.32■■□□□ 1.64
HMGA2-211ENST00000545998 RAD17O75943 681 aa25.31■■□□□ 1.64
HMGA2-211ENST00000545998 GYG1P46976 350 aa25.31■■□□□ 1.64
HMGA2-211ENST00000545998 GPC2Q8N158 579 aa25.31■■□□□ 1.64
HMGA2-211ENST00000545998 ZNF784Q8NCA9 323 aaPredicted RBP25.31■■□□□ 1.64
HMGA2-211ENST00000545998 AKAP2Q9Y2D5 859 aa25.31■■□□□ 1.64
HMGA2-211ENST00000545998 KDM2BQ8NHM5 1336 aa25.31■■□□□ 1.64
HMGA2-211ENST00000545998 ZNF646O15015 1829 aaPredicted RBP25.31■■□□□ 1.64
HMGA2-211ENST00000545998 HSP90AB4PQ58FF6 505 aa25.31■■□□□ 1.64
HMGA2-211ENST00000545998 CIAPIN1Q6FI81 312 aa25.31■■□□□ 1.64
HMGA2-211ENST00000545998 FBXO33Q7Z6M2 555 aa25.31■■□□□ 1.64
HMGA2-211ENST00000545998 ZNF526Q8TF50 670 aaPredicted RBP25.31■■□□□ 1.64
HMGA2-211ENST00000545998 WDR90Q96KV7 1748 aa25.3■■□□□ 1.64
HMGA2-211ENST00000545998 IL1R1P14778 569 aa25.3■■□□□ 1.64
HMGA2-211ENST00000545998 HIBADHP31937 336 aaKnown RBP25.3■■□□□ 1.64
HMGA2-211ENST00000545998 TNIP1Q15025 636 aa25.3■■□□□ 1.64
HMGA2-211ENST00000545998 ZNF609O15014 1411 aa25.29■■□□□ 1.64
HMGA2-211ENST00000545998 TIMM10P62072 90 aa25.29■■□□□ 1.64
HMGA2-211ENST00000545998 CAVIN4Q5BKX8 364 aa25.29■■□□□ 1.64
HMGA2-211ENST00000545998 ERC1Q8IUD2 1116 aa25.29■■□□□ 1.64
HMGA2-211ENST00000545998 GJA3Q9Y6H8 435 aa25.29■■□□□ 1.64
HMGA2-211ENST00000545998 A0A1B0GUL7 405 aa25.28■■□□□ 1.64
HMGA2-211ENST00000545998 PSMD14O00487 310 aa25.28■■□□□ 1.64
HMGA2-211ENST00000545998 BCAMP50895 628 aa25.28■■□□□ 1.64
HMGA2-211ENST00000545998 GPR108Q9NPR9 543 aa25.28■■□□□ 1.64
HMGA2-211ENST00000545998 L3MBTL3Q96JM7 780 aaPredicted RBP25.27■■□□□ 1.64
HMGA2-211ENST00000545998 USP17L3A6NCW0 530 aa25.27■■□□□ 1.64
HMGA2-211ENST00000545998 USP17L4A6NCW7 530 aa25.27■■□□□ 1.64
HMGA2-211ENST00000545998 TNNI3KQ59H18 835 aa25.27■■□□□ 1.64
HMGA2-211ENST00000545998 USP17L1Q7RTZ2 530 aa25.27■■□□□ 1.64
HMGA2-211ENST00000545998 VPS37DQ86XT2 251 aa25.27■■□□□ 1.64
HMGA2-211ENST00000545998 TDRD7Q8NHU6 1098 aaKnown RBP25.27■■□□□ 1.64
HMGA2-211ENST00000545998 FPGT-TNNI3KV9GXZ4 949 aa25.27■■□□□ 1.64
HMGA2-211ENST00000545998 RAB11FIP3O75154 756 aa25.26■■□□□ 1.63
HMGA2-211ENST00000545998 VIL1P09327 827 aaKnown RBP25.26■■□□□ 1.63
HMGA2-211ENST00000545998 ADORA1P30542 326 aa25.26■■□□□ 1.63
HMGA2-211ENST00000545998 RHPN1Q8TCX5 695 aa25.26■■□□□ 1.63
HMGA2-211ENST00000545998 DCTPP1Q9H773 170 aa25.26■■□□□ 1.63
HMGA2-211ENST00000545998 GPBP1L1Q9HC44 474 aaPredicted RBP25.26■■□□□ 1.63
HMGA2-211ENST00000545998 SCN4AP35499 1836 aa25.25■■□□□ 1.63
HMGA2-211ENST00000545998 MYH13Q9UKX3 1938 aa25.25■■□□□ 1.63
HMGA2-211ENST00000545998 POTECB2RU33 542 aa25.24■■□□□ 1.63
HMGA2-211ENST00000545998 HDAC1Q13547 482 aaPredicted RBP25.24■■□□□ 1.63
HMGA2-211ENST00000545998 STRIP1Q5VSL9 837 aa25.24■■□□□ 1.63
HMGA2-211ENST00000545998 KIF1BPQ96EK5 621 aa25.24■■□□□ 1.63
HMGA2-211ENST00000545998 XAGE2Q96GT9 111 aa25.24■■□□□ 1.63
HMGA2-211ENST00000545998 NEUROD6Q96NK8 337 aa25.24■■□□□ 1.63
HMGA2-211ENST00000545998 NMRK2Q9NPI5 230 aa25.24■■□□□ 1.63
HMGA2-211ENST00000545998 APBB1O00213 710 aa25.23■■□□□ 1.63
HMGA2-211ENST00000545998 DACT2Q5SW24 774 aa25.23■■□□□ 1.63
HMGA2-211ENST00000545998 GMPSP49915 693 aaPredicted RBP25.22■■□□□ 1.63
HMGA2-211ENST00000545998 SCNN1DP51172 638 aa25.22■■□□□ 1.63
HMGA2-211ENST00000545998 GTF2IP78347 998 aa25.22■■□□□ 1.63
HMGA2-211ENST00000545998 TTLL5Q6EMB2 1281 aa25.22■■□□□ 1.63
HMGA2-211ENST00000545998 RSBN1LQ6PCB5 846 aaPredicted RBP25.22■■□□□ 1.63
HMGA2-211ENST00000545998 RRAGCQ9HB90 399 aa25.22■■□□□ 1.63
HMGA2-211ENST00000545998 ZBTB12Q9Y330 459 aaPredicted RBP25.22■■□□□ 1.63
HMGA2-211ENST00000545998 PHKA1P46020 1223 aa25.22■■□□□ 1.63
HMGA2-211ENST00000545998 EAF2Q96CJ1 260 aaPredicted RBP25.22■■□□□ 1.63
HMGA2-211ENST00000545998 IL1RAPL2Q9NP60 686 aa25.22■■□□□ 1.63
HMGA2-211ENST00000545998 IQSEC3Q9UPP2 1182 aaPredicted RBP25.22■■□□□ 1.63
HMGA2-211ENST00000545998 CCDC102BQ68D86 513 aa25.21■■□□□ 1.63
HMGA2-211ENST00000545998 FBXW7Q969H0 707 aa25.21■■□□□ 1.63
HMGA2-211ENST00000545998 FAM205AQ6ZU69 1335 aa25.21■■□□□ 1.63
HMGA2-211ENST00000545998 RPS12P25398 132 aaKnown RBP25.2■■□□□ 1.62
HMGA2-211ENST00000545998 GMLQ99445 158 aa25.2■■□□□ 1.62
HMGA2-211ENST00000545998 MXD3Q9BW11 206 aa25.2■■□□□ 1.62
HMGA2-211ENST00000545998 ZBTB22O15209 634 aa25.19■■□□□ 1.62
HMGA2-211ENST00000545998 VEGFAP15692 232 aaPredicted RBP25.19■■□□□ 1.62
HMGA2-211ENST00000545998 DPF2Q92785 391 aa25.19■■□□□ 1.62
HMGA2-211ENST00000545998 LRRCC1Q9C099 1032 aa25.19■■□□□ 1.62
HMGA2-211ENST00000545998 GPRC5DQ9NZD1 345 aa25.19■■□□□ 1.62
HMGA2-211ENST00000545998 IQCA1LA6NCM1 817 aa25.18■■□□□ 1.62
HMGA2-211ENST00000545998 CLASRPQ8N2M8 674 aaKnown RBP25.18■■□□□ 1.62
HMGA2-211ENST00000545998 AGBL3Q8NEM8 1001 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms