RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 PCDH11YQ9BZA8 1340 aa14.3□□□□□ -0.12
COL4A6-209ENST00000545689 PSMA7O14818 248 aa14.3□□□□□ -0.12
COL4A6-209ENST00000545689 CEP112Q8N8E3 955 aa14.3□□□□□ -0.12
COL4A6-209ENST00000545689 DDX12PQ92771 950 aa14.3□□□□□ -0.12
COL4A6-209ENST00000545689 DNAJC25Q9H1X3 360 aa14.3□□□□□ -0.12
COL4A6-209ENST00000545689 KRT222Q8N1A0 295 aa14.29□□□□□ -0.12
COL4A6-209ENST00000545689 CFAP74Q9C0B2 1584 aa14.29□□□□□ -0.12
COL4A6-209ENST00000545689 MAP2K1Q02750 393 aaPredicted RBP14.29□□□□□ -0.12
COL4A6-209ENST00000545689 SMC1AQ14683 1233 aaKnown RBP14.29□□□□□ -0.12
COL4A6-209ENST00000545689 NAA16Q6N069 864 aaPredicted RBP14.29□□□□□ -0.12
COL4A6-209ENST00000545689 CTR9Q6PD62 1173 aa14.29□□□□□ -0.12
COL4A6-209ENST00000545689 PA2G4Q9UQ80 394 aaKnown RBP14.29□□□□□ -0.12
COL4A6-209ENST00000545689 PTPDC1A2A3K4 754 aa14.29□□□□□ -0.12
COL4A6-209ENST00000545689 CHL1O00533 1208 aa14.29□□□□□ -0.12
COL4A6-209ENST00000545689 IL2RBP14784 551 aa14.29□□□□□ -0.12
COL4A6-209ENST00000545689 RBM28Q9NW13 759 aaKnown RBP14.29□□□□□ -0.12
COL4A6-209ENST00000545689 KDM5DQ9BY66 1539 aa14.29□□□□□ -0.12
COL4A6-209ENST00000545689 TBCAO75347 108 aaKnown RBP14.29□□□□□ -0.12
COL4A6-209ENST00000545689 MAP3K19Q56UN5 1328 aa14.29□□□□□ -0.12
COL4A6-209ENST00000545689 MAGEB6P1A0A0J9YX57 407 aa14.29□□□□□ -0.12
COL4A6-209ENST00000545689 CHRNA2Q15822 529 aa14.29□□□□□ -0.12
COL4A6-209ENST00000545689 C6orf229H3BNL8 230 aa14.28□□□□□ -0.12
COL4A6-209ENST00000545689 NBPF6Q5VWK0 638 aa14.28□□□□□ -0.12
COL4A6-209ENST00000545689 NBPF5PQ86XG9 351 aaPredicted RBP14.28□□□□□ -0.12
COL4A6-209ENST00000545689 NBPF4Q96M43 638 aa14.28□□□□□ -0.12
COL4A6-209ENST00000545689 CTAGE15A4D2H0 777 aa14.28□□□□□ -0.12
COL4A6-209ENST00000545689 CTAGE8P0CG41 777 aa14.28□□□□□ -0.12
COL4A6-209ENST00000545689 KRT2P35908 639 aa14.28□□□□□ -0.12
COL4A6-209ENST00000545689 TFCP2Q12800 502 aa14.28□□□□□ -0.12
COL4A6-209ENST00000545689 CTAGE6Q86UF2 777 aa14.28□□□□□ -0.12
COL4A6-209ENST00000545689 CTAGE4Q8IX94 777 aa14.28□□□□□ -0.12
COL4A6-209ENST00000545689 ATP10AO60312 1499 aa14.28□□□□□ -0.12
COL4A6-209ENST00000545689 SLC39A6Q13433 755 aa14.28□□□□□ -0.12
COL4A6-209ENST00000545689 TRIM35Q9UPQ4 493 aa14.28□□□□□ -0.12
COL4A6-209ENST00000545689 SBNO2Q9Y2G9 1366 aa14.28□□□□□ -0.12
COL4A6-209ENST00000545689 RPS6KB1P23443 525 aa14.28□□□□□ -0.12
COL4A6-209ENST00000545689 LRRC2Q9BYS8 371 aa14.28□□□□□ -0.12
COL4A6-209ENST00000545689 BICDL2A1A5D9 508 aa14.28□□□□□ -0.12
COL4A6-209ENST00000545689 CCDC175P0C221 793 aa14.28□□□□□ -0.12
COL4A6-209ENST00000545689 KRT83P78385 493 aa14.28□□□□□ -0.12
COL4A6-209ENST00000545689 PANK2Q9BZ23 570 aa14.28□□□□□ -0.12
COL4A6-209ENST00000545689 SYT1P21579 422 aa14.27□□□□□ -0.12
COL4A6-209ENST00000545689 JARID2Q92833 1246 aaPredicted RBP14.27□□□□□ -0.12
COL4A6-209ENST00000545689 SLU7O95391 586 aaKnown RBP14.27□□□□□ -0.12
COL4A6-209ENST00000545689 PLCG2P16885 1265 aa14.27□□□□□ -0.12
COL4A6-209ENST00000545689 RAB11FIP4Q86YS3 637 aa14.27□□□□□ -0.12
COL4A6-209ENST00000545689 ZNF804AQ7Z570 1209 aa14.27□□□□□ -0.13
COL4A6-209ENST00000545689 BICC1Q9H694 974 aaKnown RBP14.27□□□□□ -0.13
COL4A6-209ENST00000545689 C6orf50Q9HD87 102 aa14.27□□□□□ -0.13
COL4A6-209ENST00000545689 ADAMTS2O95450 1211 aa14.27□□□□□ -0.13
COL4A6-209ENST00000545689 TUBBP07437 444 aa14.27□□□□□ -0.13
COL4A6-209ENST00000545689 RFC4P35249 363 aa14.27□□□□□ -0.13
COL4A6-209ENST00000545689 PAF1Q8N7H5 531 aa14.27□□□□□ -0.13
COL4A6-209ENST00000545689 PRPHP41219 470 aa14.27□□□□□ -0.13
COL4A6-209ENST00000545689 PPP1R2P41236 205 aa14.27□□□□□ -0.13
COL4A6-209ENST00000545689 USP37Q86T82 979 aa14.27□□□□□ -0.13
COL4A6-209ENST00000545689 JADE2Q9NQC1 790 aa14.27□□□□□ -0.13
COL4A6-209ENST00000545689 AKR1B10O60218 316 aa14.26□□□□□ -0.13
COL4A6-209ENST00000545689 SEC24BO95487 1268 aa14.26□□□□□ -0.13
COL4A6-209ENST00000545689 TCEANC2Q96MN5 208 aa14.26□□□□□ -0.13
COL4A6-209ENST00000545689 PHF23Q9BUL5 403 aaPredicted RBP14.26□□□□□ -0.13
COL4A6-209ENST00000545689 SSH2Q76I76 1423 aa14.26□□□□□ -0.13
COL4A6-209ENST00000545689 SPATA31E1Q6ZUB1 1445 aa14.26□□□□□ -0.13
COL4A6-209ENST00000545689 NAP1L4Q99733 375 aaKnown RBP14.26□□□□□ -0.13
COL4A6-209ENST00000545689 ELP1O95163 1332 aa14.26□□□□□ -0.13
COL4A6-209ENST00000545689 NEBLO76041 1014 aa14.26□□□□□ -0.13
COL4A6-209ENST00000545689 TBC1D5Q92609 795 aa14.26□□□□□ -0.13
COL4A6-209ENST00000545689 NLRP3Q96P20 1036 aa14.26□□□□□ -0.13
COL4A6-209ENST00000545689 SYNMO15061 1565 aa14.26□□□□□ -0.13
COL4A6-209ENST00000545689 ISM2Q6H9L7 571 aa14.26□□□□□ -0.13
COL4A6-209ENST00000545689 GIGYF2Q6Y7W6 1299 aaKnown RBP14.26□□□□□ -0.13
COL4A6-209ENST00000545689 PLBD2Q8NHP8 589 aa14.26□□□□□ -0.13
COL4A6-209ENST00000545689 SIRT1Q96EB6 747 aa14.26□□□□□ -0.13
COL4A6-209ENST00000545689 PLVAPQ9BX97 442 aa14.26□□□□□ -0.13
COL4A6-209ENST00000545689 ANKRD2Q9GZV1 360 aa14.26□□□□□ -0.13
COL4A6-209ENST00000545689 TMCO5BA8MYB1 307 aa14.26□□□□□ -0.13
COL4A6-209ENST00000545689 POLR3GO15318 223 aaPredicted RBP14.26□□□□□ -0.13
COL4A6-209ENST00000545689 CWF19L2Q2TBE0 894 aaKnown RBP14.26□□□□□ -0.13
COL4A6-209ENST00000545689 TCERG1LQ5VWI1 586 aa14.26□□□□□ -0.13
COL4A6-209ENST00000545689 C19orf44Q9H6X5 657 aa14.26□□□□□ -0.13
COL4A6-209ENST00000545689 ARFGAP3Q9NP61 516 aa14.26□□□□□ -0.13
COL4A6-209ENST00000545689 HSF2BPO75031 334 aa14.25□□□□□ -0.13
COL4A6-209ENST00000545689 APOBRQ0VD83 1088 aa14.25□□□□□ -0.13
COL4A6-209ENST00000545689 SETDB2Q96T68 719 aa14.25□□□□□ -0.13
COL4A6-209ENST00000545689 GOLGA6L10A0A0M3HER8 536 aa14.25□□□□□ -0.13
COL4A6-209ENST00000545689 GCP02774 474 aa14.25□□□□□ -0.13
COL4A6-209ENST00000545689 METTL22Q9BUU2 404 aaPredicted RBP14.25□□□□□ -0.13
COL4A6-209ENST00000545689 GOPCQ9HD26 462 aa14.25□□□□□ -0.13
COL4A6-209ENST00000545689 GSTTP1A0A1W2PQM5 241 aa14.25□□□□□ -0.13
COL4A6-209ENST00000545689 DCAF8L1A6NGE4 600 aa14.25□□□□□ -0.13
COL4A6-209ENST00000545689 AFMP43652 599 aa14.25□□□□□ -0.13
COL4A6-209ENST00000545689 FAM160A1Q05DH4 1040 aa14.25□□□□□ -0.13
COL4A6-209ENST00000545689 HLTFQ14527 1009 aaKnown RBP eCLIP14.25□□□□□ -0.13
COL4A6-209ENST00000545689 NFATC2IPQ8NCF5 419 aa14.25□□□□□ -0.13
COL4A6-209ENST00000545689 BBXQ8WY36 941 aaPredicted RBP14.25□□□□□ -0.13
COL4A6-209ENST00000545689 PPP1R1BQ9UD71 204 aaPredicted RBP14.25□□□□□ -0.13
COL4A6-209ENST00000545689 TACC1O75410 805 aa14.25□□□□□ -0.13
COL4A6-209ENST00000545689 ATP6V1AP38606 617 aa14.25□□□□□ -0.13
COL4A6-209ENST00000545689 NGLY1Q96IV0 654 aa14.25□□□□□ -0.13
COL4A6-209ENST00000545689 TMEM87BQ96K49 555 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 212 ms