RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 FOXO4P98177 505 aa25.18■■□□□ 1.62
CHD4-213ENST00000545584 CYP4F22Q6NT55 531 aa25.18■■□□□ 1.62
CHD4-213ENST00000545584 SAPCD2Q86UD0 394 aa25.18■■□□□ 1.62
CHD4-213ENST00000545584 WBP1LQ9NX94 342 aa25.18■■□□□ 1.62
CHD4-213ENST00000545584 USP17L8P0C7I0 530 aa25.17■■□□□ 1.62
CHD4-213ENST00000545584 CTCFP49711 727 aaPredicted RBP25.17■■□□□ 1.62
CHD4-213ENST00000545584 ZNF280AP59817 542 aaPredicted RBP25.17■■□□□ 1.62
CHD4-213ENST00000545584 CHRNDQ07001 517 aa25.17■■□□□ 1.62
CHD4-213ENST00000545584 PSME4Q14997 1843 aa25.16■■□□□ 1.62
CHD4-213ENST00000545584 CCDC57Q2TAC2 916 aa25.16■■□□□ 1.62
CHD4-213ENST00000545584 TAF7LQ5H9L4 462 aa25.16■■□□□ 1.62
CHD4-213ENST00000545584 LMBR1LQ6UX01 489 aa25.16■■□□□ 1.62
CHD4-213ENST00000545584 SULF1Q8IWU6 871 aa25.16■■□□□ 1.62
CHD4-213ENST00000545584 FBXW7Q969H0 707 aa25.16■■□□□ 1.62
CHD4-213ENST00000545584 HHIPL1Q96JK4 782 aa25.16■■□□□ 1.62
CHD4-213ENST00000545584 GMLQ99445 158 aa25.15■■□□□ 1.62
CHD4-213ENST00000545584 GGA3Q9NZ52 723 aa25.15■■□□□ 1.62
CHD4-213ENST00000545584 MYO3BQ8WXR4 1341 aa25.14■■□□□ 1.62
CHD4-213ENST00000545584 STRIP1Q5VSL9 837 aa25.14■■□□□ 1.62
CHD4-213ENST00000545584 BEGAINQ9BUH8 593 aa25.14■■□□□ 1.62
CHD4-213ENST00000545584 MYOZ2Q9NPC6 264 aa25.14■■□□□ 1.62
CHD4-213ENST00000545584 SLFN5Q08AF3 891 aa25.13■■□□□ 1.61
CHD4-213ENST00000545584 TXNRD3Q86VQ6 643 aa25.13■■□□□ 1.61
CHD4-213ENST00000545584 OGFOD1Q8N543 542 aa25.13■■□□□ 1.61
CHD4-213ENST00000545584 MRPL50Q8N5N7 158 aaKnown RBP25.13■■□□□ 1.61
CHD4-213ENST00000545584 PRDM10Q9NQV6 1147 aa25.13■■□□□ 1.61
CHD4-213ENST00000545584 POLR2AP24928 1970 aaKnown RBP25.13■■□□□ 1.61
CHD4-213ENST00000545584 ADM5C9JUS6 153 aa25.12■■□□□ 1.61
CHD4-213ENST00000545584 MAP2K2P36507 400 aa25.12■■□□□ 1.61
CHD4-213ENST00000545584 SCARF1Q14162 830 aa25.12■■□□□ 1.61
CHD4-213ENST00000545584 EPHA10Q5JZY3 1008 aa25.12■■□□□ 1.61
CHD4-213ENST00000545584 DACT2Q5SW24 774 aa25.12■■□□□ 1.61
CHD4-213ENST00000545584 PTPRCP08575 1304 aa25.12■■□□□ 1.61
CHD4-213ENST00000545584 CCER2I3L3R5 266 aa25.11■■□□□ 1.61
CHD4-213ENST00000545584 TTLL5Q6EMB2 1281 aa25.11■■□□□ 1.61
CHD4-213ENST00000545584 LDHAL6AQ6ZMR3 332 aa25.11■■□□□ 1.61
CHD4-213ENST00000545584 C2orf69Q8N8R5 385 aa25.11■■□□□ 1.61
CHD4-213ENST00000545584 CNNM1Q9NRU3 951 aa25.11■■□□□ 1.61
CHD4-213ENST00000545584 TAF5LO75529 589 aa25.1■■□□□ 1.61
CHD4-213ENST00000545584 KLRK1P26718 216 aa25.1■■□□□ 1.61
CHD4-213ENST00000545584 HUNKP57058 714 aa25.1■■□□□ 1.61
CHD4-213ENST00000545584 ANGEL2Q5VTE6 544 aaKnown RBP25.1■■□□□ 1.61
CHD4-213ENST00000545584 DLK2Q6UY11 383 aa25.1■■□□□ 1.61
CHD4-213ENST00000545584 HELBQ8NG08 1087 aaPredicted RBP25.1■■□□□ 1.61
CHD4-213ENST00000545584 GBA2Q9HCG7 927 aaPredicted RBP25.1■■□□□ 1.61
CHD4-213ENST00000545584 MMP14P50281 582 aa25.09■■□□□ 1.61
CHD4-213ENST00000545584 MXD3Q9BW11 206 aa25.09■■□□□ 1.61
CHD4-213ENST00000545584 ASTN2O75129 1339 aaPredicted RBP25.09■■□□□ 1.61
CHD4-213ENST00000545584 THSD7BQ9C0I4 1608 aa25.08■■□□□ 1.61
CHD4-213ENST00000545584 AOC2O75106 756 aa25.08■■□□□ 1.61
CHD4-213ENST00000545584 LBX1P52954 281 aa25.08■■□□□ 1.61
CHD4-213ENST00000545584 SSH1Q8WYL5 1049 aa25.08■■□□□ 1.61
CHD4-213ENST00000545584 ZNF594Q96JF6 807 aaPredicted RBP25.08■■□□□ 1.61
CHD4-213ENST00000545584 CD209Q9NNX6 404 aa25.08■■□□□ 1.61
CHD4-213ENST00000545584 HDAC9Q9UKV0 1011 aa25.08■■□□□ 1.61
CHD4-213ENST00000545584 PITPNM2Q9BZ72 1349 aa25.08■■□□□ 1.6
CHD4-213ENST00000545584 NBPF7P0C2Y1 421 aaPredicted RBP25.07■■□□□ 1.6
CHD4-213ENST00000545584 GTF2IP78347 998 aa25.07■■□□□ 1.6
CHD4-213ENST00000545584 C15orf52Q6ZUT6 534 aaKnown RBP25.07■■□□□ 1.6
CHD4-213ENST00000545584 SUCLG2Q96I99 432 aa25.07■■□□□ 1.6
CHD4-213ENST00000545584 PLIN1O60240 522 aa25.06■■□□□ 1.6
CHD4-213ENST00000545584 ALDH1L2Q3SY69 923 aa25.06■■□□□ 1.6
CHD4-213ENST00000545584 ZNF804AQ7Z570 1209 aa25.06■■□□□ 1.6
CHD4-213ENST00000545584 CDCA5Q96FF9 252 aa25.06■■□□□ 1.6
CHD4-213ENST00000545584 CDCA7LQ96GN5 454 aa25.06■■□□□ 1.6
CHD4-213ENST00000545584 UTYO14607 1347 aa25.06■■□□□ 1.6
CHD4-213ENST00000545584 SNAP23O00161 211 aa25.05■■□□□ 1.6
CHD4-213ENST00000545584 HSPA8P11142 646 aaKnown RBP25.05■■□□□ 1.6
CHD4-213ENST00000545584 NOGQ13253 232 aa25.05■■□□□ 1.6
CHD4-213ENST00000545584 RGMBQ6NW40 437 aa25.04■■□□□ 1.6
CHD4-213ENST00000545584 KIAA0825Q8IV33 1275 aa25.04■■□□□ 1.6
CHD4-213ENST00000545584 SMC4Q9NTJ3 1288 aa25.04■■□□□ 1.6
CHD4-213ENST00000545584 NBPF9Q3BBW0 867 aa25.03■■□□□ 1.6
CHD4-213ENST00000545584 KAZALD1Q96I82 304 aa25.03■■□□□ 1.6
CHD4-213ENST00000545584 CAPN15O75808 1086 aa25.02■■□□□ 1.6
CHD4-213ENST00000545584 CT47B1P0C2W7 299 aaPredicted RBP25.02■■□□□ 1.6
CHD4-213ENST00000545584 BRPF1P55201 1214 aaPredicted RBP25.02■■□□□ 1.6
CHD4-213ENST00000545584 CCDC102AQ96A19 550 aa25.02■■□□□ 1.6
CHD4-213ENST00000545584 BICC1Q9H694 974 aaKnown RBP25.02■■□□□ 1.6
CHD4-213ENST00000545584 IRS2Q9Y4H2 1338 aa25.02■■□□□ 1.6
CHD4-213ENST00000545584 WNT10BO00744 389 aa25.01■■□□□ 1.59
CHD4-213ENST00000545584 CA12O43570 354 aa25.01■■□□□ 1.59
CHD4-213ENST00000545584 TRMT2AQ8IZ69 625 aaKnown RBP25.01■■□□□ 1.59
CHD4-213ENST00000545584 A0A1B0GUL6 1792 aa25■■□□□ 1.59
CHD4-213ENST00000545584 ZNF646O15015 1829 aaPredicted RBP25■■□□□ 1.59
CHD4-213ENST00000545584 IL1R1P14778 569 aa25■■□□□ 1.59
CHD4-213ENST00000545584 ZNF157P51786 506 aaPredicted RBP25■■□□□ 1.59
CHD4-213ENST00000545584 UBE4AQ14139 1066 aa25■■□□□ 1.59
CHD4-213ENST00000545584 RABL6Q3YEC7 729 aaPredicted RBP25■■□□□ 1.59
CHD4-213ENST00000545584 SASH1O94885 1247 aa24.99■■□□□ 1.59
CHD4-213ENST00000545584 FKBP1BP68106 108 aa24.99■■□□□ 1.59
CHD4-213ENST00000545584 MROH5Q6ZUA9 1318 aa24.99■■□□□ 1.59
CHD4-213ENST00000545584 PUS3Q9BZE2 481 aaKnown RBP24.98■■□□□ 1.59
CHD4-213ENST00000545584 NF2P35240 595 aa24.97■■□□□ 1.59
CHD4-213ENST00000545584 FKBP1AP62942 108 aaKnown RBP24.97■■□□□ 1.59
CHD4-213ENST00000545584 APOBEC3FQ8IUX4 373 aaKnown RBP24.97■■□□□ 1.59
CHD4-213ENST00000545584 ANKRD44Q8N8A2 993 aa24.97■■□□□ 1.59
CHD4-213ENST00000545584 USP44Q9H0E7 712 aa24.97■■□□□ 1.59
CHD4-213ENST00000545584 SCAF8Q9UPN6 1271 aaKnown RBP24.97■■□□□ 1.59
CHD4-213ENST00000545584 HIBADHP31937 336 aaKnown RBP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms