RNA–Protein interactions for RNA: ENST00000545561.1

HPS5-210, Transcript of HPS5, biogenesis of lysosomal organelles complex 2 subunit 2, humanhuman

TSL 2

Gene HPS5, Length 1,121 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5-210ENST00000545561 CCDC87Q9NVE4 849 aa8.14□□□□□ -1.11
HPS5-210ENST00000545561 LINC01387J3KSC0 135 aa8.13□□□□□ -1.11
HPS5-210ENST00000545561 DYRK3O43781 588 aa8.13□□□□□ -1.11
HPS5-210ENST00000545561 H2AFB1P0C5Y9 115 aa8.13□□□□□ -1.11
HPS5-210ENST00000545561 H2AFB2P0C5Z0 115 aa8.13□□□□□ -1.11
HPS5-210ENST00000545561 PTPRAP18433 802 aa8.13□□□□□ -1.11
HPS5-210ENST00000545561 NOS3P29474 1203 aa8.13□□□□□ -1.11
HPS5-210ENST00000545561 IREB2P48200 963 aaKnown RBP8.13□□□□□ -1.11
HPS5-210ENST00000545561 ADAMTSL4Q6UY14 1074 aa8.13□□□□□ -1.11
HPS5-210ENST00000545561 GJD3Q8N144 294 aa8.13□□□□□ -1.11
HPS5-210ENST00000545561 TMEM130Q8N3G9 435 aa8.13□□□□□ -1.11
HPS5-210ENST00000545561 NFKBIEO00221 500 aa8.12□□□□□ -1.11
HPS5-210ENST00000545561 SERPINB4P48594 390 aa8.12□□□□□ -1.11
HPS5-210ENST00000545561 SNX29Q8TEQ0 813 aa8.12□□□□□ -1.11
HPS5-210ENST00000545561 TP53INP1Q96A56 240 aa8.12□□□□□ -1.11
HPS5-210ENST00000545561 ADAM19Q9H013 955 aa8.12□□□□□ -1.11
HPS5-210ENST00000545561 DZANK1Q9NVP4 752 aa8.12□□□□□ -1.11
HPS5-210ENST00000545561 FAM177BA6PVY3 158 aa8.11□□□□□ -1.11
HPS5-210ENST00000545561 PHACTR2O75167 634 aa8.11□□□□□ -1.11
HPS5-210ENST00000545561 GLYCTKQ8IVS8 523 aa8.11□□□□□ -1.11
HPS5-210ENST00000545561 GALNT11Q8NCW6 608 aa8.11□□□□□ -1.11
HPS5-210ENST00000545561 AKTIPQ9H8T0 292 aa8.11□□□□□ -1.11
HPS5-210ENST00000545561 SH2B1Q9NRF2 756 aaPredicted RBP8.11□□□□□ -1.11
HPS5-210ENST00000545561 F8W735 103 aaPredicted RBP8.1□□□□□ -1.11
HPS5-210ENST00000545561 H3BRB1 525 aa8.1□□□□□ -1.11
HPS5-210ENST00000545561 EREGO14944 169 aa8.1□□□□□ -1.11
HPS5-210ENST00000545561 ACPPP15309 386 aa8.1□□□□□ -1.11
HPS5-210ENST00000545561 EPHA1P21709 976 aa8.1□□□□□ -1.11
HPS5-210ENST00000545561 ECM1Q16610 540 aa8.1□□□□□ -1.11
HPS5-210ENST00000545561 FAM117BQ6P1L5 589 aa8.1□□□□□ -1.11
HPS5-210ENST00000545561 TXNDC11Q6PKC3 985 aa8.1□□□□□ -1.11
HPS5-210ENST00000545561 TXNDC2Q86VQ3 553 aa8.1□□□□□ -1.11
HPS5-210ENST00000545561 KLHL23Q8NBE8 558 aa8.1□□□□□ -1.11
HPS5-210ENST00000545561 TUT1Q9H6E5 874 aaKnown RBP8.1□□□□□ -1.11
HPS5-210ENST00000545561 FOXD3Q9UJU5 478 aaPredicted RBP8.1□□□□□ -1.11
HPS5-210ENST00000545561 PDE2AO00408 941 aaPredicted RBP8.09□□□□□ -1.11
HPS5-210ENST00000545561 TM4SF5O14894 197 aa8.09□□□□□ -1.11
HPS5-210ENST00000545561 FSCN2O14926 492 aa8.09□□□□□ -1.11
HPS5-210ENST00000545561 EDN3P14138 238 aa8.09□□□□□ -1.11
HPS5-210ENST00000545561 CDC25BP30305 580 aa8.09□□□□□ -1.11
HPS5-210ENST00000545561 CD68P34810 354 aaPredicted RBP8.09□□□□□ -1.11
HPS5-210ENST00000545561 MEGF10Q96KG7 1140 aa8.09□□□□□ -1.11
HPS5-210ENST00000545561 TRPA1O75762 1119 aa8.08□□□□□ -1.12
HPS5-210ENST00000545561 ALX3O95076 343 aa8.08□□□□□ -1.12
HPS5-210ENST00000545561 CABP4P57796 275 aa8.08□□□□□ -1.12
HPS5-210ENST00000545561 DZIP1LQ8IYY4 767 aaKnown RBP8.08□□□□□ -1.12
HPS5-210ENST00000545561 TMEM102Q8N9M5 508 aaPredicted RBP8.08□□□□□ -1.12
HPS5-210ENST00000545561 OSMRQ99650 979 aa8.08□□□□□ -1.12
HPS5-210ENST00000545561 BRPF3Q9ULD4 1205 aa8.08□□□□□ -1.12
HPS5-210ENST00000545561 H3BRJ5 948 aa8.07□□□□□ -1.12
HPS5-210ENST00000545561 ARHGAP4P98171 946 aa8.07□□□□□ -1.12
HPS5-210ENST00000545561 FOXD4L6Q3SYB3 417 aaPredicted RBP8.07□□□□□ -1.12
HPS5-210ENST00000545561 PRSS36Q5K4E3 855 aa8.07□□□□□ -1.12
HPS5-210ENST00000545561 FOXD4L3Q6VB84 417 aaPredicted RBP8.07□□□□□ -1.12
HPS5-210ENST00000545561 WNT8BQ93098 351 aa8.07□□□□□ -1.12
HPS5-210ENST00000545561 NXPE3Q969Y0 559 aa8.07□□□□□ -1.12
HPS5-210ENST00000545561 HHIPQ96QV1 700 aa8.07□□□□□ -1.12
HPS5-210ENST00000545561 ZKSCAN3Q9BRR0 538 aa8.07□□□□□ -1.12
HPS5-210ENST00000545561 CARD10Q9BWT7 1032 aa8.07□□□□□ -1.12
HPS5-210ENST00000545561 ZFYVE28Q9HCC9 887 aa8.07□□□□□ -1.12
HPS5-210ENST00000545561 SEC31BQ9NQW1 1179 aa8.07□□□□□ -1.12
HPS5-210ENST00000545561 AMOTL2Q9Y2J4 779 aa8.07□□□□□ -1.12
HPS5-210ENST00000545561 PIP4K2BP78356 416 aa8.06□□□□□ -1.12
HPS5-210ENST00000545561 Q6ZS46 218 aa8.06□□□□□ -1.12
HPS5-210ENST00000545561 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.06□□□□□ -1.12
HPS5-210ENST00000545561 KCNK4Q9NYG8 393 aa8.06□□□□□ -1.12
HPS5-210ENST00000545561 SOX13Q9UN79 622 aa8.06□□□□□ -1.12
HPS5-210ENST00000545561 NDUFB5O43674 189 aa8.05□□□□□ -1.12
HPS5-210ENST00000545561 PEAR1Q5VY43 1037 aaPredicted RBP8.05□□□□□ -1.12
HPS5-210ENST00000545561 AGGF1Q8N302 714 aaeCLIP8.05□□□□□ -1.122e-7■■□□□ 11.4
HPS5-210ENST00000545561 CCER1Q8TC90 406 aaPredicted RBP8.05□□□□□ -1.12
HPS5-210ENST00000545561 BSNDQ8WZ55 320 aa8.05□□□□□ -1.12
HPS5-210ENST00000545561 OSGEPQ9NPF4 335 aa8.05□□□□□ -1.12
HPS5-210ENST00000545561 WISP1O95388 367 aa8.04□□□□□ -1.12
HPS5-210ENST00000545561 KLHDC7BQ96G42 594 aa8.04□□□□□ -1.12
HPS5-210ENST00000545561 BHLHE41Q9C0J9 482 aaPredicted RBP8.04□□□□□ -1.12
HPS5-210ENST00000545561 GLB1P16278 677 aa8.03□□□□□ -1.12
HPS5-210ENST00000545561 PDE3BQ13370 1112 aa8.03□□□□□ -1.12
HPS5-210ENST00000545561 DUOXA2Q1HG44 320 aa8.03□□□□□ -1.12
HPS5-210ENST00000545561 ZMYM1Q5SVZ6 1142 aa8.03□□□□□ -1.12
HPS5-210ENST00000545561 ACAD11Q709F0 780 aa8.03□□□□□ -1.12
HPS5-210ENST00000545561 CITED4Q96RK1 184 aa8.03□□□□□ -1.12
HPS5-210ENST00000545561 LATS2Q9NRM7 1088 aa8.03□□□□□ -1.12
HPS5-210ENST00000545561 DDX3YO15523 660 aaKnown RBP8.02□□□□□ -1.13
HPS5-210ENST00000545561 ADAM11O75078 769 aa8.02□□□□□ -1.13
HPS5-210ENST00000545561 NEFLP07196 543 aa8.02□□□□□ -1.13
HPS5-210ENST00000545561 PRR23CQ6ZRP0 262 aa8.02□□□□□ -1.13
HPS5-210ENST00000545561 VN1R5Q7Z5H4 357 aa8.02□□□□□ -1.13
HPS5-210ENST00000545561 Q8N3U1 123 aa8.02□□□□□ -1.13
HPS5-210ENST00000545561 FOXD4L4Q8WXT5 416 aaPredicted RBP8.02□□□□□ -1.13
HPS5-210ENST00000545561 FAM129BQ96TA1 746 aa8.02□□□□□ -1.13
HPS5-210ENST00000545561 POLR3DP05423 398 aaPredicted RBP8.01□□□□□ -1.13
HPS5-210ENST00000545561 ARL4DP49703 201 aa8.01□□□□□ -1.13
HPS5-210ENST00000545561 KIAA1211Q6ZU35 1233 aa8.01□□□□□ -1.13
HPS5-210ENST00000545561 GALNT12Q8IXK2 581 aa8.01□□□□□ -1.13
HPS5-210ENST00000545561 SLC7A3Q8WY07 619 aa8.01□□□□□ -1.13
HPS5-210ENST00000545561 UBL7Q96S82 380 aaPredicted RBP8.01□□□□□ -1.13
HPS5-210ENST00000545561 CEP41Q9BYV8 373 aa8.01□□□□□ -1.13
HPS5-210ENST00000545561 SOX1O00570 391 aaPredicted RBP8□□□□□ -1.13
HPS5-210ENST00000545561 BRD1O95696 1058 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms