RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 SLIT2O94813 1529 aa8.62□□□□□ -1.03
SPPL3-209ENST00000545209 COL15A1P39059 1388 aa8.61□□□□□ -1.03
SPPL3-209ENST00000545209 RGS20O76081 388 aa8.61□□□□□ -1.03
SPPL3-209ENST00000545209 A1BGP04217 495 aa8.61□□□□□ -1.03
SPPL3-209ENST00000545209 SDSP20132 328 aa8.61□□□□□ -1.03
SPPL3-209ENST00000545209 GGCXP38435 758 aa8.61□□□□□ -1.03
SPPL3-209ENST00000545209 G3BP1Q13283 466 aaKnown RBP eCLIP8.61□□□□□ -1.03
SPPL3-209ENST00000545209 UNC5CLQ8IV45 518 aa8.61□□□□□ -1.03
SPPL3-209ENST00000545209 ANP32EQ9BTT0 268 aa8.61□□□□□ -1.03
SPPL3-209ENST00000545209 BICC1Q9H694 974 aaKnown RBP8.61□□□□□ -1.03
SPPL3-209ENST00000545209 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.61□□□□□ -1.03
SPPL3-209ENST00000545209 ATG3Q9NT62 314 aa8.61□□□□□ -1.03
SPPL3-209ENST00000545209 CWC25Q9NXE8 425 aaPredicted RBP8.61□□□□□ -1.03
SPPL3-209ENST00000545209 STAP2Q9UGK3 403 aa8.61□□□□□ -1.03
SPPL3-209ENST00000545209 ARFGEF2Q9Y6D5 1785 aa8.61□□□□□ -1.03
SPPL3-209ENST00000545209 SPATA31A6Q5VVP1 1343 aa8.6□□□□□ -1.03
SPPL3-209ENST00000545209 SALL3Q9BXA9 1300 aa8.6□□□□□ -1.03
SPPL3-209ENST00000545209 A0A087WZG4 1122 aa8.6□□□□□ -1.03
SPPL3-209ENST00000545209 HOXA2O43364 376 aa8.6□□□□□ -1.03
SPPL3-209ENST00000545209 REC8O95072 547 aa8.6□□□□□ -1.03
SPPL3-209ENST00000545209 ADH1BP00325 375 aa8.6□□□□□ -1.03
SPPL3-209ENST00000545209 RBM25P49756 843 aaKnown RBP8.6□□□□□ -1.03
SPPL3-209ENST00000545209 UBE3BQ7Z3V4 1068 aa8.6□□□□□ -1.03
SPPL3-209ENST00000545209 DNAJC10Q8IXB1 793 aa8.6□□□□□ -1.03
SPPL3-209ENST00000545209 CLASRPQ8N2M8 674 aaKnown RBP8.6□□□□□ -1.03
SPPL3-209ENST00000545209 CCDC191Q8NCU4 936 aa8.6□□□□□ -1.03
SPPL3-209ENST00000545209 SPIRE2Q8WWL2 714 aa8.6□□□□□ -1.03
SPPL3-209ENST00000545209 THAP11Q96EK4 314 aa8.6□□□□□ -1.03
SPPL3-209ENST00000545209 NGLY1Q96IV0 654 aa8.6□□□□□ -1.03
SPPL3-209ENST00000545209 SPSB2Q99619 263 aa8.6□□□□□ -1.03
SPPL3-209ENST00000545209 IL1RAPL2Q9NP60 686 aa8.6□□□□□ -1.03
SPPL3-209ENST00000545209 ITGB4P16144 1822 aa8.59□□□□□ -1.03
SPPL3-209ENST00000545209 ATP5J2-PTCD1G3V325 749 aa8.59□□□□□ -1.03
SPPL3-209ENST00000545209 ERC2O15083 957 aa8.59□□□□□ -1.03
SPPL3-209ENST00000545209 FMNL1O95466 1100 aaPredicted RBP8.59□□□□□ -1.03
SPPL3-209ENST00000545209 IFIT2P09913 472 aaKnown RBP8.59□□□□□ -1.03
SPPL3-209ENST00000545209 VPS72Q15906 364 aa8.59□□□□□ -1.03
SPPL3-209ENST00000545209 Q3C1V9 767 aa8.59□□□□□ -1.03
SPPL3-209ENST00000545209 TPRNQ4KMQ1 711 aa8.59□□□□□ -1.03
SPPL3-209ENST00000545209 BRICD5Q6PL45 260 aa8.59□□□□□ -1.03
SPPL3-209ENST00000545209 TTLL7Q6ZT98 887 aa8.59□□□□□ -1.03
SPPL3-209ENST00000545209 C8orf37Q96NL8 207 aa8.59□□□□□ -1.03
SPPL3-209ENST00000545209 ZBTB3Q9H5J0 574 aa8.59□□□□□ -1.03
SPPL3-209ENST00000545209 ZNF330Q9Y3S2 320 aaPredicted RBP8.59□□□□□ -1.03
SPPL3-209ENST00000545209 AFDNP55196 1824 aaKnown RBP8.59□□□□□ -1.03
SPPL3-209ENST00000545209 TTC41PQ6P2S7 1318 aa8.58□□□□□ -1.04
SPPL3-209ENST00000545209 HSP90AB3PQ58FF7 597 aa8.58□□□□□ -1.04
SPPL3-209ENST00000545209 HSCBQ8IWL3 235 aa8.58□□□□□ -1.04
SPPL3-209ENST00000545209 SMARCC1Q92922 1105 aaPredicted RBP8.58□□□□□ -1.04
SPPL3-209ENST00000545209 HLA-CQ95604 372 aa8.58□□□□□ -1.04
SPPL3-209ENST00000545209 KAZALD1Q96I82 304 aa8.58□□□□□ -1.04
SPPL3-209ENST00000545209 NUP188Q5SRE5 1749 aa8.57□□□□□ -1.04
SPPL3-209ENST00000545209 DOT1LQ8TEK3 1739 aa8.57□□□□□ -1.04
SPPL3-209ENST00000545209 USP42Q9H9J4 1324 aaKnown RBP8.57□□□□□ -1.04
SPPL3-209ENST00000545209 H7C1W4 665 aa8.57□□□□□ -1.04
SPPL3-209ENST00000545209 GLRX3O76003 335 aaKnown RBP8.57□□□□□ -1.04
SPPL3-209ENST00000545209 S1PR4O95977 384 aa8.57□□□□□ -1.04
SPPL3-209ENST00000545209 CYP19A1P11511 503 aaPredicted RBP8.57□□□□□ -1.04
SPPL3-209ENST00000545209 TRIM28Q13263 835 aaKnown RBP8.57□□□□□ -1.04
SPPL3-209ENST00000545209 TCIRG1Q13488 830 aa8.57□□□□□ -1.04
SPPL3-209ENST00000545209 RABL6Q3YEC7 729 aaPredicted RBP8.57□□□□□ -1.04
SPPL3-209ENST00000545209 CNTROBQ8N137 903 aa8.57□□□□□ -1.04
SPPL3-209ENST00000545209 MARCH10Q8NA82 808 aaPredicted RBP8.57□□□□□ -1.04
SPPL3-209ENST00000545209 RILPL2Q969X0 211 aa8.57□□□□□ -1.04
SPPL3-209ENST00000545209 ARXQ96QS3 562 aa8.57□□□□□ -1.04
SPPL3-209ENST00000545209 SLC6A16Q9GZN6 736 aa8.57□□□□□ -1.04
SPPL3-209ENST00000545209 COPRSQ9NQ92 184 aa8.57□□□□□ -1.04
SPPL3-209ENST00000545209 PA2G4Q9UQ80 394 aaKnown RBP8.57□□□□□ -1.04
SPPL3-209ENST00000545209 KAT6BQ8WYB5 2073 aa8.57□□□□□ -1.04
SPPL3-209ENST00000545209 MAP3K15Q6ZN16 1313 aa8.56□□□□□ -1.04
SPPL3-209ENST00000545209 IL6STP40189 918 aaPredicted RBP8.56□□□□□ -1.04
SPPL3-209ENST00000545209 CASP7P55210 303 aa8.56□□□□□ -1.04
SPPL3-209ENST00000545209 MYT1Q01538 1121 aa8.56□□□□□ -1.04
SPPL3-209ENST00000545209 DIXDC1Q155Q3 683 aa8.56□□□□□ -1.04
SPPL3-209ENST00000545209 EPHA10Q5JZY3 1008 aa8.56□□□□□ -1.04
SPPL3-209ENST00000545209 MEX3CQ5U5Q3 659 aaKnown RBP8.56□□□□□ -1.04
SPPL3-209ENST00000545209 TSHZ3Q63HK5 1081 aa8.56□□□□□ -1.04
SPPL3-209ENST00000545209 RNF19BQ6ZMZ0 732 aa8.56□□□□□ -1.04
SPPL3-209ENST00000545209 AACSQ86V21 672 aa8.56□□□□□ -1.04
SPPL3-209ENST00000545209 FNBP4Q8N3X1 1017 aaPredicted RBP8.56□□□□□ -1.04
SPPL3-209ENST00000545209 ISCA1Q9BUE6 129 aa8.56□□□□□ -1.04
SPPL3-209ENST00000545209 TBC1D2Q9BYX2 928 aa8.56□□□□□ -1.04
SPPL3-209ENST00000545209 ECHDC1Q9NTX5 307 aa8.56□□□□□ -1.04
SPPL3-209ENST00000545209 ERVV-1B6SEH8 477 aa8.55□□□□□ -1.04
SPPL3-209ENST00000545209 RNF223E7ERA6 249 aa8.55□□□□□ -1.04
SPPL3-209ENST00000545209 FDX1P10109 184 aa8.55□□□□□ -1.04
SPPL3-209ENST00000545209 MCCP23508 829 aa8.55□□□□□ -1.04
SPPL3-209ENST00000545209 GUCA2AQ02747 115 aa8.55□□□□□ -1.04
SPPL3-209ENST00000545209 LMBR1LQ6UX01 489 aa8.55□□□□□ -1.04
SPPL3-209ENST00000545209 FAM160A2Q8N612 972 aaPredicted RBP8.55□□□□□ -1.04
SPPL3-209ENST00000545209 PI4K2BQ8TCG2 481 aa8.55□□□□□ -1.04
SPPL3-209ENST00000545209 ACSBG1Q96GR2 724 aa8.55□□□□□ -1.04
SPPL3-209ENST00000545209 ESYT1Q9BSJ8 1104 aa8.55□□□□□ -1.04
SPPL3-209ENST00000545209 SIL1Q9H173 461 aa8.55□□□□□ -1.04
SPPL3-209ENST00000545209 CCDC87Q9NVE4 849 aa8.55□□□□□ -1.04
SPPL3-209ENST00000545209 USP21Q9UK80 565 aa8.55□□□□□ -1.04
SPPL3-209ENST00000545209 CHMP3Q9Y3E7 222 aa8.55□□□□□ -1.04
SPPL3-209ENST00000545209 BCL9LQ86UU0 1499 aa8.55□□□□□ -1.04
SPPL3-209ENST00000545209 PALLDQ8WX93 1383 aa8.54□□□□□ -1.04
SPPL3-209ENST00000545209 LOC102724428A0A0B4J2F2 783 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms