RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 TTC14Q96N46 770 aa22.67■■□□□ 1.22
BPTF-208ENST00000544778 ZSCAN16Q9H4T2 348 aaPredicted RBP22.66■■□□□ 1.22
BPTF-208ENST00000544778 PHF8Q9UPP1 1060 aa22.66■■□□□ 1.22
BPTF-208ENST00000544778 EPRSP07814 1512 aaKnown RBP22.66■■□□□ 1.22
BPTF-208ENST00000544778 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.66■■□□□ 1.22
BPTF-208ENST00000544778 MAGEB6P1A0A0J9YX57 407 aa22.66■■□□□ 1.22
BPTF-208ENST00000544778 PPANQ9NQ55 473 aaKnown RBP22.66■■□□□ 1.22
BPTF-208ENST00000544778 SMARCA4P51532 1647 aa22.66■■□□□ 1.22
BPTF-208ENST00000544778 DCAF17Q5H9S7 520 aaPredicted RBP22.66■■□□□ 1.22
BPTF-208ENST00000544778 SBNO2Q9Y2G9 1366 aa22.66■■□□□ 1.22
BPTF-208ENST00000544778 NEK11Q8NG66 645 aa22.66■■□□□ 1.22
BPTF-208ENST00000544778 ANO6Q4KMQ2 910 aa22.66■■□□□ 1.22
BPTF-208ENST00000544778 HMG20BQ9P0W2 317 aa22.66■■□□□ 1.22
BPTF-208ENST00000544778 OPA1O60313 960 aa22.65■■□□□ 1.22
BPTF-208ENST00000544778 ERICH3Q5RHP9 1530 aa22.65■■□□□ 1.22
BPTF-208ENST00000544778 ERCC5P28715 1186 aaPredicted RBP22.65■■□□□ 1.22
BPTF-208ENST00000544778 CUL4BQ13620 913 aa22.65■■□□□ 1.22
BPTF-208ENST00000544778 CNNM2Q9H8M5 875 aa22.65■■□□□ 1.22
BPTF-208ENST00000544778 PAXBP1Q9Y5B6 917 aa22.65■■□□□ 1.22
BPTF-208ENST00000544778 MCM7P33993 719 aa22.65■■□□□ 1.22
BPTF-208ENST00000544778 KMT5BQ4FZB7 885 aa22.65■■□□□ 1.22
BPTF-208ENST00000544778 PPP1R9BQ96SB3 815 aa22.65■■□□□ 1.22
BPTF-208ENST00000544778 UBXN1Q04323 297 aa22.64■■□□□ 1.22
BPTF-208ENST00000544778 VPS52Q8N1B4 723 aa22.64■■□□□ 1.22
BPTF-208ENST00000544778 PLIN2Q99541 437 aa22.64■■□□□ 1.22
BPTF-208ENST00000544778 CHRNA2Q15822 529 aa22.64■■□□□ 1.21
BPTF-208ENST00000544778 ATAD2BQ9ULI0 1458 aa22.64■■□□□ 1.21
BPTF-208ENST00000544778 GJA3Q9Y6H8 435 aa22.64■■□□□ 1.21
BPTF-208ENST00000544778 PLEKHH2Q8IVE3 1493 aa22.64■■□□□ 1.21
BPTF-208ENST00000544778 DAPK3O43293 454 aa22.64■■□□□ 1.21
BPTF-208ENST00000544778 TMTC2Q8N394 836 aa22.64■■□□□ 1.21
BPTF-208ENST00000544778 ZNF830Q96NB3 372 aaPredicted RBP22.64■■□□□ 1.21
BPTF-208ENST00000544778 TNNI2P48788 182 aa22.63■■□□□ 1.21
BPTF-208ENST00000544778 DNAJC21Q5F1R6 531 aaKnown RBP22.63■■□□□ 1.21
BPTF-208ENST00000544778 SEPT6Q14141 434 aa22.63■■□□□ 1.21
BPTF-208ENST00000544778 SEPT14Q6ZU15 432 aa22.63■■□□□ 1.21
BPTF-208ENST00000544778 NAA25Q14CX7 972 aa22.63■■□□□ 1.21
BPTF-208ENST00000544778 CCDC121Q6ZUS5 278 aa22.63■■□□□ 1.21
BPTF-208ENST00000544778 NLRP3Q96P20 1036 aa22.63■■□□□ 1.21
BPTF-208ENST00000544778 ZNF408Q9H9D4 720 aa22.63■■□□□ 1.21
BPTF-208ENST00000544778 PI4KAP2A4QPH2 592 aa22.63■■□□□ 1.21
BPTF-208ENST00000544778 POLD1P28340 1107 aa22.63■■□□□ 1.21
BPTF-208ENST00000544778 GNAQP50148 359 aa22.63■■□□□ 1.21
BPTF-208ENST00000544778 PI4KAP1Q8N8J0 262 aa22.63■■□□□ 1.21
BPTF-208ENST00000544778 EMILIN1Q9Y6C2 1016 aa22.63■■□□□ 1.21
BPTF-208ENST00000544778 TLDC2A0PJX2 215 aa22.63■■□□□ 1.21
BPTF-208ENST00000544778 PPP2R5DQ14738 602 aa22.63■■□□□ 1.21
BPTF-208ENST00000544778 DNAI1Q9UI46 699 aa22.63■■□□□ 1.21
BPTF-208ENST00000544778 ALDH3A1P30838 453 aa22.62■■□□□ 1.21
BPTF-208ENST00000544778 ARFGAP3Q9NP61 516 aa22.62■■□□□ 1.21
BPTF-208ENST00000544778 RAPGEF1Q13905 1077 aa22.62■■□□□ 1.21
BPTF-208ENST00000544778 MRRFQ96E11 262 aaKnown RBP22.62■■□□□ 1.21
BPTF-208ENST00000544778 KRT2P35908 639 aa22.62■■□□□ 1.21
BPTF-208ENST00000544778 JDP2Q8WYK2 163 aa22.62■■□□□ 1.21
BPTF-208ENST00000544778 NACA2Q9H009 215 aa22.62■■□□□ 1.21
BPTF-208ENST00000544778 PARP3Q9Y6F1 533 aa22.62■■□□□ 1.21
BPTF-208ENST00000544778 SUPT6HQ7KZ85 1726 aaKnown RBP22.62■■□□□ 1.21
BPTF-208ENST00000544778 NKTRP30414 1462 aaKnown RBP22.62■■□□□ 1.21
BPTF-208ENST00000544778 RARSP54136 660 aaKnown RBP22.62■■□□□ 1.21
BPTF-208ENST00000544778 TBC1D9Q6ZT07 1266 aa22.62■■□□□ 1.21
BPTF-208ENST00000544778 Q6ZUG5 572 aa22.62■■□□□ 1.21
BPTF-208ENST00000544778 SNRPA1P09661 255 aaKnown RBP22.62■■□□□ 1.21
BPTF-208ENST00000544778 GTPBP4Q9BZE4 634 aaKnown RBP22.62■■□□□ 1.21
BPTF-208ENST00000544778 BMP15O95972 392 aa22.61■■□□□ 1.21
BPTF-208ENST00000544778 UBLCP1Q8WVY7 318 aaPredicted RBP22.61■■□□□ 1.21
BPTF-208ENST00000544778 C8orf37Q96NL8 207 aa22.61■■□□□ 1.21
BPTF-208ENST00000544778 JAG2Q9Y219 1238 aa22.61■■□□□ 1.21
BPTF-208ENST00000544778 AMOTL2Q9Y2J4 779 aa22.61■■□□□ 1.21
BPTF-208ENST00000544778 ZEB2O60315 1214 aa22.61■■□□□ 1.21
BPTF-208ENST00000544778 HS2ST1Q7LGA3 356 aa22.61■■□□□ 1.21
BPTF-208ENST00000544778 NIP7Q9Y221 180 aaKnown RBP eCLIP22.61■■□□□ 1.21
BPTF-208ENST00000544778 CEP57Q86XR8 500 aa22.61■■□□□ 1.21
BPTF-208ENST00000544778 SKAP1Q86WV1 359 aa22.61■■□□□ 1.21
BPTF-208ENST00000544778 AOPEPQ8N6M6 819 aa22.61■■□□□ 1.21
BPTF-208ENST00000544778 TBC1D31Q96DN5 1066 aa22.61■■□□□ 1.21
BPTF-208ENST00000544778 KRT79Q5XKE5 535 aa22.6■■□□□ 1.21
BPTF-208ENST00000544778 BRF1Q92994 677 aa22.6■■□□□ 1.21
BPTF-208ENST00000544778 CCDC171Q6TFL3 1326 aa22.6■■□□□ 1.21
BPTF-208ENST00000544778 CPLX4Q7Z7G2 160 aa22.6■■□□□ 1.21
BPTF-208ENST00000544778 KCNG4Q8TDN1 519 aa22.6■■□□□ 1.21
BPTF-208ENST00000544778 ZHX1Q9UKY1 873 aaPredicted RBP22.6■■□□□ 1.21
BPTF-208ENST00000544778 ANKRD24Q8TF21 1146 aa22.6■■□□□ 1.21
BPTF-208ENST00000544778 HSPA1LP34931 641 aa22.6■■□□□ 1.21
BPTF-208ENST00000544778 SLC8A3P57103 927 aa22.6■■□□□ 1.21
BPTF-208ENST00000544778 INF2Q27J81 1249 aa22.6■■□□□ 1.21
BPTF-208ENST00000544778 ZNF710Q8N1W2 664 aa22.6■■□□□ 1.21
BPTF-208ENST00000544778 ANXA1P04083 346 aa22.6■■□□□ 1.21
BPTF-208ENST00000544778 SPOUT1Q5T280 376 aaKnown RBP22.6■■□□□ 1.21
BPTF-208ENST00000544778 GOLGA1Q92805 767 aa22.6■■□□□ 1.21
BPTF-208ENST00000544778 FRMD4BQ9Y2L6 1034 aa22.6■■□□□ 1.21
BPTF-208ENST00000544778 CAMSAP2Q08AD1 1489 aa22.6■■□□□ 1.21
BPTF-208ENST00000544778 ANKRD13DQ6ZTN6 518 aa22.59■■□□□ 1.21
BPTF-208ENST00000544778 JAKMIP2Q96AA8 810 aa22.59■■□□□ 1.21
BPTF-208ENST00000544778 FNBP1Q96RU3 617 aa22.59■■□□□ 1.21
BPTF-208ENST00000544778 GUCA1BQ9UMX6 200 aa22.59■■□□□ 1.21
BPTF-208ENST00000544778 CNPY2Q9Y2B0 182 aa22.59■■□□□ 1.21
BPTF-208ENST00000544778 RAB3GAP1Q15042 981 aa22.59■■□□□ 1.21
BPTF-208ENST00000544778 WDR44Q5JSH3 913 aa22.59■■□□□ 1.21
BPTF-208ENST00000544778 ZC3H12CQ9C0D7 883 aaKnown RBP22.59■■□□□ 1.21
BPTF-208ENST00000544778 GTF2A1P52655 376 aaPredicted RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms