RNA–Protein interactions for RNA: ENST00000544754.1

LMO3-231, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-231ENST00000544754 GLRX3O76003 335 aaKnown RBP15.27■□□□□ 0.04
LMO3-231ENST00000544754 BMP2KLQ5H9B9 411 aa15.27■□□□□ 0.04
LMO3-231ENST00000544754 KLHL34Q8N239 644 aa15.27■□□□□ 0.04
LMO3-231ENST00000544754 ANKIB1Q9P2G1 1089 aa15.27■□□□□ 0.04
LMO3-231ENST00000544754 PPP1R1BQ9UD71 204 aaPredicted RBP15.27■□□□□ 0.04
LMO3-231ENST00000544754 ZNF804BA4D1E1 1349 aa15.26■□□□□ 0.03
LMO3-231ENST00000544754 ATP5JP18859 108 aa15.26■□□□□ 0.03
LMO3-231ENST00000544754 KCNJ4P48050 445 aa15.26■□□□□ 0.03
LMO3-231ENST00000544754 GORABQ5T7V8 394 aa15.26■□□□□ 0.03
LMO3-231ENST00000544754 OLFM4Q6UX06 510 aa15.26■□□□□ 0.03
LMO3-231ENST00000544754 TTLL6Q8N841 843 aa15.26■□□□□ 0.03
LMO3-231ENST00000544754 PODXL2Q9NZ53 605 aa15.26■□□□□ 0.03
LMO3-231ENST00000544754 NSFL1CQ9UNZ2 370 aaKnown RBP15.26■□□□□ 0.03
LMO3-231ENST00000544754 LEMD3Q9Y2U8 911 aa15.26■□□□□ 0.03
LMO3-231ENST00000544754 IRS2Q9Y4H2 1338 aa15.25■□□□□ 0.03
LMO3-231ENST00000544754 PHKA1P46020 1223 aa15.25■□□□□ 0.03
LMO3-231ENST00000544754 CCDC158Q5M9N0 1113 aa15.25■□□□□ 0.03
LMO3-231ENST00000544754 PELP1Q8IZL8 1130 aaKnown RBP15.25■□□□□ 0.03
LMO3-231ENST00000544754 C7orf43Q8WVR3 580 aa15.25■□□□□ 0.03
LMO3-231ENST00000544754 UFL1O94874 794 aa15.24■□□□□ 0.03
LMO3-231ENST00000544754 ATP2B4P23634 1241 aa15.24■□□□□ 0.03
LMO3-231ENST00000544754 KLRK1P26718 216 aa15.24■□□□□ 0.03
LMO3-231ENST00000544754 TTC39AQ5SRH9 613 aa15.24■□□□□ 0.03
LMO3-231ENST00000544754 CCDC102BQ68D86 513 aa15.24■□□□□ 0.03
LMO3-231ENST00000544754 MPNDQ8N594 471 aa15.24■□□□□ 0.03
LMO3-231ENST00000544754 BOLA2Q9H3K6 86 aa15.24■□□□□ 0.03
LMO3-231ENST00000544754 ZNF219Q9P2Y4 722 aaPredicted RBP15.24■□□□□ 0.03
LMO3-231ENST00000544754 GGA1Q9UJY5 639 aa15.24■□□□□ 0.03
LMO3-231ENST00000544754 SNED1Q8TER0 1413 aa15.24■□□□□ 0.03
LMO3-231ENST00000544754 ARFGEF1Q9Y6D6 1849 aa15.24■□□□□ 0.03
LMO3-231ENST00000544754 MYO5AQ9Y4I1 1855 aaKnown RBP15.23■□□□□ 0.03
LMO3-231ENST00000544754 MAP4K4O95819 1239 aaPredicted RBP15.23■□□□□ 0.03
LMO3-231ENST00000544754 SDSP20132 328 aa15.23■□□□□ 0.03
LMO3-231ENST00000544754 GYG1P46976 350 aa15.23■□□□□ 0.03
LMO3-231ENST00000544754 BCAMP50895 628 aa15.23■□□□□ 0.03
LMO3-231ENST00000544754 TBC1D16Q8TBP0 767 aa15.23■□□□□ 0.03
LMO3-231ENST00000544754 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.23■□□□□ 0.03
LMO3-231ENST00000544754 ZNF512BQ96KM6 892 aaPredicted RBP15.23■□□□□ 0.03
LMO3-231ENST00000544754 GPR101Q96P66 508 aaPredicted RBP15.23■□□□□ 0.03
LMO3-231ENST00000544754 TMX4Q9H1E5 349 aaPredicted RBP15.23■□□□□ 0.03
LMO3-231ENST00000544754 PIM2Q9P1W9 311 aa15.23■□□□□ 0.03
LMO3-231ENST00000544754 POLLQ9UGP5 575 aa15.23■□□□□ 0.03
LMO3-231ENST00000544754 MYH7P12883 1935 aa15.22■□□□□ 0.03
LMO3-231ENST00000544754 UQCRFS1P1P0C7P4 283 aa15.22■□□□□ 0.03
LMO3-231ENST00000544754 ARID4AP29374 1257 aaPredicted RBP15.22■□□□□ 0.03
LMO3-231ENST00000544754 SCARF1Q14162 830 aa15.22■□□□□ 0.03
LMO3-231ENST00000544754 CC2D2BQ6DHV5 1058 aa15.22■□□□□ 0.03
LMO3-231ENST00000544754 DPP8Q6V1X1 898 aaPredicted RBP15.22■□□□□ 0.03
LMO3-231ENST00000544754 C15orf52Q6ZUT6 534 aaKnown RBP15.22■□□□□ 0.03
LMO3-231ENST00000544754 TXNRD3Q86VQ6 643 aa15.22■□□□□ 0.03
LMO3-231ENST00000544754 NLGN2Q8NFZ4 835 aa15.22■□□□□ 0.03
LMO3-231ENST00000544754 FAM84BQ96KN1 310 aaPredicted RBP15.22■□□□□ 0.03
LMO3-231ENST00000544754 HAUS7Q99871 368 aa15.22■□□□□ 0.03
LMO3-231ENST00000544754 FER1L6Q2WGJ9 1857 aa15.22■□□□□ 0.03
LMO3-231ENST00000544754 TRIM6-TRIM34B2RNG4 842 aa15.21■□□□□ 0.03
LMO3-231ENST00000544754 C6orf229H3BNL8 230 aa15.21■□□□□ 0.03
LMO3-231ENST00000544754 C21orf2O43822 256 aa15.21■□□□□ 0.03
LMO3-231ENST00000544754 MCAMP43121 646 aa15.21■□□□□ 0.03
LMO3-231ENST00000544754 CAVIN4Q5BKX8 364 aa15.21■□□□□ 0.03
LMO3-231ENST00000544754 FBXO33Q7Z6M2 555 aa15.21■□□□□ 0.03
LMO3-231ENST00000544754 NDUFB9Q9Y6M9 179 aa15.21■□□□□ 0.03
LMO3-231ENST00000544754 DOCK2Q92608 1830 aa15.21■□□□□ 0.03
LMO3-231ENST00000544754 CHD4Q14839 1912 aa15.21■□□□□ 0.02
LMO3-231ENST00000544754 MED23Q9ULK4 1368 aa15.21■□□□□ 0.02
LMO3-231ENST00000544754 DALRD3Q5D0E6 543 aaKnown RBP15.2■□□□□ 0.02
LMO3-231ENST00000544754 CNTROBQ8N137 903 aa15.2■□□□□ 0.02
LMO3-231ENST00000544754 RILPL2Q969X0 211 aa15.2■□□□□ 0.02
LMO3-231ENST00000544754 EDC3Q96F86 508 aaKnown RBP15.2■□□□□ 0.02
LMO3-231ENST00000544754 DNAJC2Q99543 621 aaKnown RBP15.2■□□□□ 0.02
LMO3-231ENST00000544754 FHDC1Q9C0D6 1143 aaPredicted RBP15.2■□□□□ 0.02
LMO3-231ENST00000544754 SNRKQ9NRH2 765 aa15.2■□□□□ 0.02
LMO3-231ENST00000544754 WWC3Q9ULE0 1092 aa15.2■□□□□ 0.02
LMO3-231ENST00000544754 HIBADHP31937 336 aaKnown RBP15.19■□□□□ 0.02
LMO3-231ENST00000544754 ZAP70P43403 619 aa15.19■□□□□ 0.02
LMO3-231ENST00000544754 RASGRF1Q13972 1273 aa15.19■□□□□ 0.02
LMO3-231ENST00000544754 C8orf34Q49A92 452 aa15.19■□□□□ 0.02
LMO3-231ENST00000544754 CCDC93Q567U6 631 aa15.19■□□□□ 0.02
LMO3-231ENST00000544754 PI16Q6UXB8 463 aa15.19■□□□□ 0.02
LMO3-231ENST00000544754 HMG20BQ9P0W2 317 aa15.19■□□□□ 0.02
LMO3-231ENST00000544754 COL1A1P02452 1464 aaPredicted RBP15.19■□□□□ 0.02
LMO3-231ENST00000544754 ZNF804AQ7Z570 1209 aa15.18■□□□□ 0.02
LMO3-231ENST00000544754 VPS37DQ86XT2 251 aa15.18■□□□□ 0.02
LMO3-231ENST00000544754 EVI5LQ96CN4 794 aa15.18■□□□□ 0.02
LMO3-231ENST00000544754 RTFDC1Q9BY42 306 aaPredicted RBP15.18■□□□□ 0.02
LMO3-231ENST00000544754 GNL3LQ9NVN8 582 aaKnown RBP15.18■□□□□ 0.02
LMO3-231ENST00000544754 PAG1Q9NWQ8 432 aa15.18■□□□□ 0.02
LMO3-231ENST00000544754 IQSEC3Q9UPP2 1182 aaPredicted RBP15.18■□□□□ 0.02
LMO3-231ENST00000544754 GOLIM4O00461 696 aa15.17■□□□□ 0.02
LMO3-231ENST00000544754 CDC45O75419 566 aa15.17■□□□□ 0.02
LMO3-231ENST00000544754 FKBP4Q02790 459 aaKnown RBP eCLIP15.17■□□□□ 0.02
LMO3-231ENST00000544754 GRIPAP1Q4V328 841 aa15.17■□□□□ 0.02
LMO3-231ENST00000544754 SOGA3Q5TF21 947 aa15.17■□□□□ 0.02
LMO3-231ENST00000544754 POTEDQ86YR6 584 aa15.17■□□□□ 0.02
LMO3-231ENST00000544754 SPATA5Q8NB90 893 aa15.17■□□□□ 0.02
LMO3-231ENST00000544754 EYA3Q99504 573 aa15.17■□□□□ 0.02
LMO3-231ENST00000544754 ANTXR1Q9H6X2 564 aa15.17■□□□□ 0.02
LMO3-231ENST00000544754 BCS1LQ9Y276 419 aa15.17■□□□□ 0.02
LMO3-231ENST00000544754 RIMBP2O15034 1052 aa15.16■□□□□ 0.02
LMO3-231ENST00000544754 SEMA3EO15041 775 aa15.16■□□□□ 0.02
LMO3-231ENST00000544754 WASHC4Q2M389 1173 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms