RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 HDAC9Q9UKV0 1011 aa12.36□□□□□ -0.43
C2CD3-220ENST00000544293 FZD1Q9UP38 647 aa12.36□□□□□ -0.43
C2CD3-220ENST00000544293 POLR2AP24928 1970 aaKnown RBP12.36□□□□□ -0.43
C2CD3-220ENST00000544293 PDE8AO60658 829 aa12.35□□□□□ -0.43
C2CD3-220ENST00000544293 ATP2B4P23634 1241 aa12.35□□□□□ -0.43
C2CD3-220ENST00000544293 MYD88Q99836 296 aa12.35□□□□□ -0.43
C2CD3-220ENST00000544293 MBIPQ9NS73 344 aa12.35□□□□□ -0.43
C2CD3-220ENST00000544293 MINPP1Q9UNW1 487 aa12.35□□□□□ -0.43
C2CD3-220ENST00000544293 DDX60Q8IY21 1712 aaKnown RBP12.34□□□□□ -0.43
C2CD3-220ENST00000544293 POTEFA5A3E0 1075 aa12.34□□□□□ -0.43
C2CD3-220ENST00000544293 C1QBPQ07021 282 aaKnown RBP12.34□□□□□ -0.43
C2CD3-220ENST00000544293 CCDC152Q4G0S7 254 aa12.34□□□□□ -0.43
C2CD3-220ENST00000544293 RIC3Q7Z5B4 369 aa12.34□□□□□ -0.43
C2CD3-220ENST00000544293 CCDC191Q8NCU4 936 aa12.34□□□□□ -0.43
C2CD3-220ENST00000544293 XDHP47989 1333 aa12.34□□□□□ -0.43
C2CD3-220ENST00000544293 G3V3G9 751 aa12.33□□□□□ -0.44
C2CD3-220ENST00000544293 FKTNO75072 461 aa12.33□□□□□ -0.44
C2CD3-220ENST00000544293 IGKV5-2P06315 115 aa12.33□□□□□ -0.44
C2CD3-220ENST00000544293 KLRK1P26718 216 aa12.33□□□□□ -0.44
C2CD3-220ENST00000544293 DCAF8Q5TAQ9 597 aa12.33□□□□□ -0.44
C2CD3-220ENST00000544293 SPRYD7Q5W111 196 aa12.33□□□□□ -0.44
C2CD3-220ENST00000544293 TTLL11Q8NHH1 800 aa12.33□□□□□ -0.44
C2CD3-220ENST00000544293 METTL22Q9BUU2 404 aaPredicted RBP12.33□□□□□ -0.44
C2CD3-220ENST00000544293 ADAMTS8Q9UP79 889 aa12.33□□□□□ -0.44
C2CD3-220ENST00000544293 ELL2O00472 640 aaPredicted RBP12.32□□□□□ -0.44
C2CD3-220ENST00000544293 SASH1O94885 1247 aa12.32□□□□□ -0.44
C2CD3-220ENST00000544293 PRKG1Q13976 671 aa12.32□□□□□ -0.44
C2CD3-220ENST00000544293 HABP4Q5JVS0 413 aaKnown RBP12.32□□□□□ -0.44
C2CD3-220ENST00000544293 STRIP1Q5VSL9 837 aa12.32□□□□□ -0.44
C2CD3-220ENST00000544293 ANKRD18AQ8IVF6 992 aa12.32□□□□□ -0.44
C2CD3-220ENST00000544293 C8orf58Q8NAV2 365 aa12.32□□□□□ -0.44
C2CD3-220ENST00000544293 RUNDC1Q96C34 613 aa12.32□□□□□ -0.44
C2CD3-220ENST00000544293 GREM2Q9H772 168 aa12.32□□□□□ -0.44
C2CD3-220ENST00000544293 BSDC1Q9NW68 430 aaPredicted RBP12.32□□□□□ -0.44
C2CD3-220ENST00000544293 PCDHAC2Q9Y5I4 1007 aa12.32□□□□□ -0.44
C2CD3-220ENST00000544293 MKI67P46013 3256 aaKnown RBP12.32□□□□□ -0.44
C2CD3-220ENST00000544293 RALBP1Q15311 655 aa12.31□□□□□ -0.44
C2CD3-220ENST00000544293 CWC25Q9NXE8 425 aaPredicted RBP12.31□□□□□ -0.44
C2CD3-220ENST00000544293 AOX1Q06278 1338 aa12.31□□□□□ -0.44
C2CD3-220ENST00000544293 MED23Q9ULK4 1368 aa12.3□□□□□ -0.44
C2CD3-220ENST00000544293 PAPPA2Q9BXP8 1791 aa12.3□□□□□ -0.44
C2CD3-220ENST00000544293 IGF2BP3O00425 579 aaKnown RBP eCLIP12.3□□□□□ -0.44
C2CD3-220ENST00000544293 GJA5P36382 358 aa12.3□□□□□ -0.44
C2CD3-220ENST00000544293 CCT4P50991 539 aaKnown RBP12.3□□□□□ -0.44
C2CD3-220ENST00000544293 CTSWP56202 376 aa12.3□□□□□ -0.44
C2CD3-220ENST00000544293 TTLL12Q14166 644 aaPredicted RBP12.3□□□□□ -0.44
C2CD3-220ENST00000544293 MAP3K11Q16584 847 aa12.3□□□□□ -0.44
C2CD3-220ENST00000544293 OTOP1Q7RTM1 612 aa12.3□□□□□ -0.44
C2CD3-220ENST00000544293 IFNL1Q8IU54 200 aa12.3□□□□□ -0.44
C2CD3-220ENST00000544293 CERS5Q8N5B7 392 aa12.3□□□□□ -0.44
C2CD3-220ENST00000544293 CLMNQ96JQ2 1002 aa12.3□□□□□ -0.44
C2CD3-220ENST00000544293 COA1Q9GZY4 146 aa12.3□□□□□ -0.44
C2CD3-220ENST00000544293 IRS2Q9Y4H2 1338 aa12.3□□□□□ -0.44
C2CD3-220ENST00000544293 SNAP23O00161 211 aa12.29□□□□□ -0.44
C2CD3-220ENST00000544293 GOLGA2Q08379 1002 aa12.29□□□□□ -0.44
C2CD3-220ENST00000544293 SREBF2Q12772 1141 aa12.29□□□□□ -0.44
C2CD3-220ENST00000544293 KIAA0825Q8IV33 1275 aa12.29□□□□□ -0.44
C2CD3-220ENST00000544293 TSPYL6Q8N831 410 aa12.29□□□□□ -0.44
C2CD3-220ENST00000544293 PTPN18Q99952 460 aa12.29□□□□□ -0.44
C2CD3-220ENST00000544293 ANGEL1Q9UNK9 670 aaKnown RBP12.29□□□□□ -0.44
C2CD3-220ENST00000544293 HTTP42858 3142 aa12.29□□□□□ -0.44
C2CD3-220ENST00000544293 H7C1W4 665 aa12.28□□□□□ -0.44
C2CD3-220ENST00000544293 EN2P19622 333 aaPredicted RBP12.28□□□□□ -0.44
C2CD3-220ENST00000544293 TTLL5Q6EMB2 1281 aa12.28□□□□□ -0.44
C2CD3-220ENST00000544293 ARMC9Q7Z3E5 817 aa12.28□□□□□ -0.44
C2CD3-220ENST00000544293 OGFOD1Q8N543 542 aa12.28□□□□□ -0.44
C2CD3-220ENST00000544293 DEFB129Q9H1M3 183 aa12.28□□□□□ -0.44
C2CD3-220ENST00000544293 MAP3K2Q9Y2U5 619 aa12.28□□□□□ -0.44
C2CD3-220ENST00000544293 TRIM17Q9Y577 477 aa12.28□□□□□ -0.44
C2CD3-220ENST00000544293 SSC5DA1L4H1 1573 aa12.27□□□□□ -0.44
C2CD3-220ENST00000544293 PI4KAP2A4QPH2 592 aa12.27□□□□□ -0.45
C2CD3-220ENST00000544293 HSP90B1P14625 803 aaKnown RBP12.27□□□□□ -0.45
C2CD3-220ENST00000544293 CASP7P55210 303 aa12.27□□□□□ -0.45
C2CD3-220ENST00000544293 GTF2IP78347 998 aa12.27□□□□□ -0.45
C2CD3-220ENST00000544293 CWF19L2Q2TBE0 894 aaKnown RBP12.27□□□□□ -0.45
C2CD3-220ENST00000544293 PI4KAP1Q8N8J0 262 aa12.27□□□□□ -0.45
C2CD3-220ENST00000544293 WNK4Q96J92 1243 aa12.27□□□□□ -0.45
C2CD3-220ENST00000544293 CDC5LQ99459 802 aaKnown RBP12.27□□□□□ -0.45
C2CD3-220ENST00000544293 PTPN22Q9Y2R2 807 aa12.27□□□□□ -0.45
C2CD3-220ENST00000544293 LEMD3Q9Y2U8 911 aa12.27□□□□□ -0.45
C2CD3-220ENST00000544293 TESPA1A2RU30 521 aaPredicted RBP12.26□□□□□ -0.45
C2CD3-220ENST00000544293 USP2O75604 605 aaPredicted RBP12.26□□□□□ -0.45
C2CD3-220ENST00000544293 FXR1P51114 621 aaKnown RBP eCLIP12.26□□□□□ -0.45
C2CD3-220ENST00000544293 KSR2Q6VAB6 950 aa12.26□□□□□ -0.45
C2CD3-220ENST00000544293 G2E3Q7L622 706 aa12.26□□□□□ -0.45
C2CD3-220ENST00000544293 MTMR14Q8NCE2 650 aa12.26□□□□□ -0.45
C2CD3-220ENST00000544293 ARMC5Q96C12 935 aa12.26□□□□□ -0.45
C2CD3-220ENST00000544293 PRMT6Q96LA8 375 aaPredicted RBP12.26□□□□□ -0.45
C2CD3-220ENST00000544293 CD209Q9NNX6 404 aa12.26□□□□□ -0.45
C2CD3-220ENST00000544293 IFT57Q9NWB7 429 aa12.26□□□□□ -0.45
C2CD3-220ENST00000544293 ZNF804BA4D1E1 1349 aa12.26□□□□□ -0.45
C2CD3-220ENST00000544293 MYO3BQ8WXR4 1341 aa12.26□□□□□ -0.45
C2CD3-220ENST00000544293 MANSC4A6NHS7 340 aaPredicted RBP12.25□□□□□ -0.45
C2CD3-220ENST00000544293 NEURL1BA8MQ27 555 aa12.25□□□□□ -0.45
C2CD3-220ENST00000544293 APAF1O14727 1248 aa12.25□□□□□ -0.45
C2CD3-220ENST00000544293 ALDH1A1P00352 501 aa12.25□□□□□ -0.45
C2CD3-220ENST00000544293 CSF1RP07333 972 aa12.25□□□□□ -0.45
C2CD3-220ENST00000544293 NF2P35240 595 aa12.25□□□□□ -0.45
C2CD3-220ENST00000544293 MMP14P50281 582 aa12.25□□□□□ -0.45
C2CD3-220ENST00000544293 INHBEP58166 350 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms