RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 PUM3Q15397 648 aaKnown RBP16.43■□□□□ 0.22
HCFC2-202ENST00000544223 RUFY3Q7L099 469 aa16.43■□□□□ 0.22
HCFC2-202ENST00000544223 LRRC2Q9BYS8 371 aa16.43■□□□□ 0.22
HCFC2-202ENST00000544223 FGFR2P21802 821 aa16.43■□□□□ 0.22
HCFC2-202ENST00000544223 GYG1P46976 350 aa16.43■□□□□ 0.22
HCFC2-202ENST00000544223 SCN7AQ01118 1682 aa16.42■□□□□ 0.22
HCFC2-202ENST00000544223 FOXD4L6Q3SYB3 417 aaPredicted RBP16.42■□□□□ 0.22
HCFC2-202ENST00000544223 FOXD4L3Q6VB84 417 aaPredicted RBP16.42■□□□□ 0.22
HCFC2-202ENST00000544223 FBXO3Q9UK99 471 aa16.42■□□□□ 0.22
HCFC2-202ENST00000544223 ZNF831Q5JPB2 1677 aa16.42■□□□□ 0.22
HCFC2-202ENST00000544223 RNF113AO15541 343 aaKnown RBP16.42■□□□□ 0.22
HCFC2-202ENST00000544223 RASGRF1Q13972 1273 aa16.42■□□□□ 0.22
HCFC2-202ENST00000544223 TTC14Q96N46 770 aa16.42■□□□□ 0.22
HCFC2-202ENST00000544223 JAG2Q9Y219 1238 aa16.42■□□□□ 0.22
HCFC2-202ENST00000544223 MROH5Q6ZUA9 1318 aa16.41■□□□□ 0.22
HCFC2-202ENST00000544223 CYP21A2P08686 494 aa16.41■□□□□ 0.22
HCFC2-202ENST00000544223 LPIN2Q92539 896 aa16.41■□□□□ 0.22
HCFC2-202ENST00000544223 HMG20BQ9P0W2 317 aa16.41■□□□□ 0.22
HCFC2-202ENST00000544223 WWC3Q9ULE0 1092 aa16.41■□□□□ 0.22
HCFC2-202ENST00000544223 HAND2P61296 217 aa16.41■□□□□ 0.22
HCFC2-202ENST00000544223 TXNRD1Q16881 649 aa16.41■□□□□ 0.22
HCFC2-202ENST00000544223 ZMYM1Q5SVZ6 1142 aa16.41■□□□□ 0.22
HCFC2-202ENST00000544223 ANKRD18AQ8IVF6 992 aa16.41■□□□□ 0.22
HCFC2-202ENST00000544223 LAMB2P55268 1798 aa16.41■□□□□ 0.22
HCFC2-202ENST00000544223 SLC9C2Q5TAH2 1124 aa16.4■□□□□ 0.22
HCFC2-202ENST00000544223 CHST3Q7LGC8 479 aa16.4■□□□□ 0.22
HCFC2-202ENST00000544223 NECAB1Q8N987 351 aa16.4■□□□□ 0.22
HCFC2-202ENST00000544223 FOXP2O15409 715 aa16.4■□□□□ 0.22
HCFC2-202ENST00000544223 APBA3O96018 575 aa16.4■□□□□ 0.22
HCFC2-202ENST00000544223 HSPD1P10809 573 aaKnown RBP16.4■□□□□ 0.22
HCFC2-202ENST00000544223 ZKSCAN1P17029 563 aaPredicted RBP16.4■□□□□ 0.22
HCFC2-202ENST00000544223 ZNF827Q17R98 1081 aa16.4■□□□□ 0.22
HCFC2-202ENST00000544223 STOX1Q6ZVD7 989 aa16.4■□□□□ 0.22
HCFC2-202ENST00000544223 GPR101Q96P66 508 aaPredicted RBP16.4■□□□□ 0.22
HCFC2-202ENST00000544223 PDRG1Q9NUG6 133 aa16.4■□□□□ 0.22
HCFC2-202ENST00000544223 RBM6P78332 1123 aaKnown RBP16.39■□□□□ 0.21
HCFC2-202ENST00000544223 TPTE2Q6XPS3 522 aa16.39■□□□□ 0.21
HCFC2-202ENST00000544223 NLRP3Q96P20 1036 aa16.39■□□□□ 0.21
HCFC2-202ENST00000544223 MINPP1Q9UNW1 487 aa16.39■□□□□ 0.21
HCFC2-202ENST00000544223 TNRC6CQ9HCJ0 1690 aaKnown RBP16.39■□□□□ 0.21
HCFC2-202ENST00000544223 GYS1P13807 737 aa16.39■□□□□ 0.21
HCFC2-202ENST00000544223 SLC5A1P13866 664 aa16.39■□□□□ 0.21
HCFC2-202ENST00000544223 TFCP2L1Q9NZI6 479 aa16.39■□□□□ 0.21
HCFC2-202ENST00000544223 LRP5O75197 1615 aa16.38■□□□□ 0.21
HCFC2-202ENST00000544223 PPFIA3O75145 1194 aa16.38■□□□□ 0.21
HCFC2-202ENST00000544223 RAB3GAP1Q15042 981 aa16.38■□□□□ 0.21
HCFC2-202ENST00000544223 SPATA5Q8NB90 893 aa16.38■□□□□ 0.21
HCFC2-202ENST00000544223 RGS17Q9UGC6 210 aaPredicted RBP16.38■□□□□ 0.21
HCFC2-202ENST00000544223 ZDHHC9Q9Y397 364 aa16.38■□□□□ 0.21
HCFC2-202ENST00000544223 STK3Q13188 491 aa16.38■□□□□ 0.21
HCFC2-202ENST00000544223 SF3B3Q15393 1217 aaKnown RBP16.38■□□□□ 0.21
HCFC2-202ENST00000544223 CDC5LQ99459 802 aaKnown RBP16.38■□□□□ 0.21
HCFC2-202ENST00000544223 GZF1Q9H116 711 aaPredicted RBP16.38■□□□□ 0.21
HCFC2-202ENST00000544223 ZSWIM6Q9HCJ5 1215 aa16.38■□□□□ 0.21
HCFC2-202ENST00000544223 CYP46A1Q9Y6A2 500 aa16.38■□□□□ 0.21
HCFC2-202ENST00000544223 UBR3Q6ZT12 1888 aa16.37■□□□□ 0.21
HCFC2-202ENST00000544223 TM4SF1P30408 202 aa16.37■□□□□ 0.21
HCFC2-202ENST00000544223 MCM4P33991 863 aa16.37■□□□□ 0.21
HCFC2-202ENST00000544223 TXNRD3Q86VQ6 643 aa16.37■□□□□ 0.21
HCFC2-202ENST00000544223 CCDC83Q8IWF9 413 aa16.37■□□□□ 0.21
HCFC2-202ENST00000544223 NKX2-3Q8TAU0 364 aa16.37■□□□□ 0.21
HCFC2-202ENST00000544223 DENND2AQ9ULE3 1009 aa16.37■□□□□ 0.21
HCFC2-202ENST00000544223 TPCN1Q9ULQ1 816 aa16.37■□□□□ 0.21
HCFC2-202ENST00000544223 CARMIL3Q8ND23 1372 aa16.36■□□□□ 0.21
HCFC2-202ENST00000544223 RPS8P62241 208 aaKnown RBP16.36■□□□□ 0.21
HCFC2-202ENST00000544223 MSL1Q68DK7 614 aa16.36■□□□□ 0.21
HCFC2-202ENST00000544223 POTEAQ6S8J7 498 aa16.36■□□□□ 0.21
HCFC2-202ENST00000544223 CNBD1Q8NA66 436 aa16.36■□□□□ 0.21
HCFC2-202ENST00000544223 KCNB2Q92953 911 aa16.36■□□□□ 0.21
HCFC2-202ENST00000544223 IL17RAQ96F46 866 aa16.36■□□□□ 0.21
HCFC2-202ENST00000544223 ZNF532Q9HCE3 1301 aa16.36■□□□□ 0.21
HCFC2-202ENST00000544223 ARID4AP29374 1257 aaPredicted RBP16.36■□□□□ 0.21
HCFC2-202ENST00000544223 ST3GAL1Q11201 340 aa16.36■□□□□ 0.21
HCFC2-202ENST00000544223 ME3Q16798 604 aa16.36■□□□□ 0.21
HCFC2-202ENST00000544223 PRR5LQ6MZQ0 368 aa16.36■□□□□ 0.21
HCFC2-202ENST00000544223 STK11IPQ8N1F8 1099 aa16.36■□□□□ 0.21
HCFC2-202ENST00000544223 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.36■□□□□ 0.21
HCFC2-202ENST00000544223 NYXQ9GZU5 481 aa16.36■□□□□ 0.21
HCFC2-202ENST00000544223 HELLSQ9NRZ9 838 aa16.36■□□□□ 0.21
HCFC2-202ENST00000544223 GPAA1O43292 621 aa16.35■□□□□ 0.21
HCFC2-202ENST00000544223 DDR1Q08345 913 aa16.35■□□□□ 0.21
HCFC2-202ENST00000544223 SLC10A5Q5PT55 438 aa16.35■□□□□ 0.21
HCFC2-202ENST00000544223 ZNF772Q68DY9 489 aaPredicted RBP16.35■□□□□ 0.21
HCFC2-202ENST00000544223 MAGEB6Q8N7X4 407 aa16.35■□□□□ 0.21
HCFC2-202ENST00000544223 INCENPQ9NQS7 918 aa16.35■□□□□ 0.21
HCFC2-202ENST00000544223 BSDC1Q9NW68 430 aaPredicted RBP16.35■□□□□ 0.21
HCFC2-202ENST00000544223 ABCF2Q9UG63 623 aa16.35■□□□□ 0.21
HCFC2-202ENST00000544223 RPAP1Q9BWH6 1393 aaPredicted RBP16.35■□□□□ 0.21
HCFC2-202ENST00000544223 RXRBP28702 533 aa16.35■□□□□ 0.21
HCFC2-202ENST00000544223 DEKP35659 375 aaKnown RBP16.35■□□□□ 0.21
HCFC2-202ENST00000544223 MIGA1Q8NAN2 632 aa16.35■□□□□ 0.21
HCFC2-202ENST00000544223 GPHNQ9NQX3 736 aaPredicted RBP16.35■□□□□ 0.21
HCFC2-202ENST00000544223 PDE6AP16499 860 aa16.34■□□□□ 0.21
HCFC2-202ENST00000544223 BLOC1S2Q6QNY1 142 aa16.34■□□□□ 0.21
HCFC2-202ENST00000544223 LIMCH1Q9UPQ0 1083 aa16.34■□□□□ 0.21
HCFC2-202ENST00000544223 EPB41L2O43491 1005 aaKnown RBP16.34■□□□□ 0.21
HCFC2-202ENST00000544223 ADD2P35612 726 aa16.34■□□□□ 0.21
HCFC2-202ENST00000544223 TOB2Q14106 344 aaPredicted RBP16.34■□□□□ 0.21
HCFC2-202ENST00000544223 TPRNQ4KMQ1 711 aa16.34■□□□□ 0.21
HCFC2-202ENST00000544223 RNF20Q5VTR2 975 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms