RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 JDP2Q8WYK2 163 aa17.87■□□□□ 0.45
TNFRSF1A-216ENST00000543995 BCL11AQ9H165 835 aa17.87■□□□□ 0.45
TNFRSF1A-216ENST00000543995 KLRK1P26718 216 aa17.86■□□□□ 0.45
TNFRSF1A-216ENST00000543995 NIM1KQ8IY84 436 aa17.86■□□□□ 0.45
TNFRSF1A-216ENST00000543995 RHPN1Q8TCX5 695 aa17.86■□□□□ 0.45
TNFRSF1A-216ENST00000543995 LPIN2Q92539 896 aa17.86■□□□□ 0.45
TNFRSF1A-216ENST00000543995 KIF1BPQ96EK5 621 aa17.86■□□□□ 0.45
TNFRSF1A-216ENST00000543995 UTRNP46939 3433 aa17.86■□□□□ 0.45
TNFRSF1A-216ENST00000543995 DOK7Q18PE1 504 aa17.85■□□□□ 0.45
TNFRSF1A-216ENST00000543995 NEUROD6Q96NK8 337 aa17.85■□□□□ 0.45
TNFRSF1A-216ENST00000543995 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.85■□□□□ 0.45
TNFRSF1A-216ENST00000543995 TIAM2Q8IVF5 1701 aa17.85■□□□□ 0.45
TNFRSF1A-216ENST00000543995 A0A1B0GUL7 405 aa17.84■□□□□ 0.45
TNFRSF1A-216ENST00000543995 FGFR2P21802 821 aa17.84■□□□□ 0.45
TNFRSF1A-216ENST00000543995 TIMM10P62072 90 aa17.84■□□□□ 0.45
TNFRSF1A-216ENST00000543995 TXNRD3Q86VQ6 643 aa17.84■□□□□ 0.45
TNFRSF1A-216ENST00000543995 DBNDD1Q9H9R9 158 aa17.84■□□□□ 0.45
TNFRSF1A-216ENST00000543995 IL1RAPL2Q9NP60 686 aa17.84■□□□□ 0.45
TNFRSF1A-216ENST00000543995 IGHDP01880 384 aa17.83■□□□□ 0.45
TNFRSF1A-216ENST00000543995 TNNI3KQ59H18 835 aa17.83■□□□□ 0.45
TNFRSF1A-216ENST00000543995 CAVIN4Q5BKX8 364 aa17.83■□□□□ 0.45
TNFRSF1A-216ENST00000543995 C15orf52Q6ZUT6 534 aaKnown RBP17.83■□□□□ 0.45
TNFRSF1A-216ENST00000543995 ZNF804AQ7Z570 1209 aa17.83■□□□□ 0.45
TNFRSF1A-216ENST00000543995 VPS37DQ86XT2 251 aa17.83■□□□□ 0.45
TNFRSF1A-216ENST00000543995 GCC1Q96CN9 775 aa17.83■□□□□ 0.45
TNFRSF1A-216ENST00000543995 LRRCC1Q9C099 1032 aa17.83■□□□□ 0.45
TNFRSF1A-216ENST00000543995 FPGT-TNNI3KV9GXZ4 949 aa17.83■□□□□ 0.45
TNFRSF1A-216ENST00000543995 ARAP2Q8WZ64 1704 aa17.83■□□□□ 0.44
TNFRSF1A-216ENST00000543995 ZNF609O15014 1411 aa17.83■□□□□ 0.44
TNFRSF1A-216ENST00000543995 COL4A5P29400 1685 aa17.83■□□□□ 0.44
TNFRSF1A-216ENST00000543995 ECE2O60344 883 aa17.82■□□□□ 0.44
TNFRSF1A-216ENST00000543995 GYG1P46976 350 aa17.82■□□□□ 0.44
TNFRSF1A-216ENST00000543995 CLASRPQ8N2M8 674 aaKnown RBP17.82■□□□□ 0.44
TNFRSF1A-216ENST00000543995 GPR108Q9NPR9 543 aa17.82■□□□□ 0.44
TNFRSF1A-216ENST00000543995 ZBTB47Q9UFB7 747 aaPredicted RBP17.82■□□□□ 0.44
TNFRSF1A-216ENST00000543995 IRS2Q9Y4H2 1338 aa17.82■□□□□ 0.44
TNFRSF1A-216ENST00000543995 HIBADHP31937 336 aaKnown RBP17.82■□□□□ 0.44
TNFRSF1A-216ENST00000543995 GORABQ5T7V8 394 aa17.82■□□□□ 0.44
TNFRSF1A-216ENST00000543995 COA1Q9GZY4 146 aa17.82■□□□□ 0.44
TNFRSF1A-216ENST00000543995 ZNRF3Q9ULT6 936 aa17.82■□□□□ 0.44
TNFRSF1A-216ENST00000543995 ADORA1P30542 326 aa17.81■□□□□ 0.44
TNFRSF1A-216ENST00000543995 AACSQ86V21 672 aa17.81■□□□□ 0.44
TNFRSF1A-216ENST00000543995 XAGE2Q96GT9 111 aa17.81■□□□□ 0.44
TNFRSF1A-216ENST00000543995 FAM84BQ96KN1 310 aaPredicted RBP17.81■□□□□ 0.44
TNFRSF1A-216ENST00000543995 SMARCA5O60264 1052 aaPredicted RBP17.8■□□□□ 0.44
TNFRSF1A-216ENST00000543995 BCAMP50895 628 aa17.8■□□□□ 0.44
TNFRSF1A-216ENST00000543995 EIF6P56537 245 aaKnown RBP17.8■□□□□ 0.44
TNFRSF1A-216ENST00000543995 PODNQ7Z5L7 613 aa17.8■□□□□ 0.44
TNFRSF1A-216ENST00000543995 EAF2Q96CJ1 260 aaPredicted RBP17.8■□□□□ 0.44
TNFRSF1A-216ENST00000543995 CCDC8Q9H0W5 538 aaPredicted RBP17.8■□□□□ 0.44
TNFRSF1A-216ENST00000543995 CD209Q9NNX6 404 aa17.8■□□□□ 0.44
TNFRSF1A-216ENST00000543995 FRAT2O75474 233 aaPredicted RBP17.79■□□□□ 0.44
TNFRSF1A-216ENST00000543995 IFIT2P09913 472 aaKnown RBP17.79■□□□□ 0.44
TNFRSF1A-216ENST00000543995 ANKRD45Q5TZF3 282 aa17.79■□□□□ 0.44
TNFRSF1A-216ENST00000543995 ERICH6BQ5W0A0 696 aa17.79■□□□□ 0.44
TNFRSF1A-216ENST00000543995 FZD9O00144 591 aa17.78■□□□□ 0.44
TNFRSF1A-216ENST00000543995 B4GALNT3Q6L9W6 998 aa17.78■□□□□ 0.44
TNFRSF1A-216ENST00000543995 FBXO33Q7Z6M2 555 aa17.78■□□□□ 0.44
TNFRSF1A-216ENST00000543995 SMC5Q8IY18 1101 aa17.78■□□□□ 0.44
TNFRSF1A-216ENST00000543995 FBXW7Q969H0 707 aa17.78■□□□□ 0.44
TNFRSF1A-216ENST00000543995 CCDC136Q96JN2 1154 aa17.78■□□□□ 0.44
TNFRSF1A-216ENST00000543995 GNL3LQ9NVN8 582 aaKnown RBP17.78■□□□□ 0.44
TNFRSF1A-216ENST00000543995 MYH13Q9UKX3 1938 aa17.78■□□□□ 0.44
TNFRSF1A-216ENST00000543995 YDJCA8MPS7 323 aa17.77■□□□□ 0.44
TNFRSF1A-216ENST00000543995 DBNDD2Q9BQY9 259 aa17.77■□□□□ 0.44
TNFRSF1A-216ENST00000543995 IQSEC3Q9UPP2 1182 aaPredicted RBP17.77■□□□□ 0.44
TNFRSF1A-216ENST00000543995 ZC3H4Q9UPT8 1303 aaKnown RBP17.77■□□□□ 0.44
TNFRSF1A-216ENST00000543995 SCN9AQ15858 1988 aa17.77■□□□□ 0.43
TNFRSF1A-216ENST00000543995 RAD17O75943 681 aa17.77■□□□□ 0.43
TNFRSF1A-216ENST00000543995 IL1R1P14778 569 aa17.77■□□□□ 0.43
TNFRSF1A-216ENST00000543995 PHKA1P46020 1223 aa17.77■□□□□ 0.43
TNFRSF1A-216ENST00000543995 CCDC158Q5M9N0 1113 aa17.77■□□□□ 0.43
TNFRSF1A-216ENST00000543995 CCDC102BQ68D86 513 aa17.77■□□□□ 0.43
TNFRSF1A-216ENST00000543995 KCNQ5Q9NR82 932 aa17.77■□□□□ 0.43
TNFRSF1A-216ENST00000543995 TLR7Q9NYK1 1049 aaKnown RBP17.77■□□□□ 0.43
TNFRSF1A-216ENST00000543995 DBNLQ9UJU6 430 aaKnown RBP17.77■□□□□ 0.43
TNFRSF1A-216ENST00000543995 ZNF541Q9H0D2 1346 aa17.76■□□□□ 0.43
TNFRSF1A-216ENST00000543995 CXCL9Q07325 125 aa17.76■□□□□ 0.43
TNFRSF1A-216ENST00000543995 TTC39AQ5SRH9 613 aa17.76■□□□□ 0.43
TNFRSF1A-216ENST00000543995 CIAPIN1Q6FI81 312 aa17.76■□□□□ 0.43
TNFRSF1A-216ENST00000543995 DPY19L2Q6NUT2 758 aa17.76■□□□□ 0.43
TNFRSF1A-216ENST00000543995 TDRD7Q8NHU6 1098 aaKnown RBP17.76■□□□□ 0.43
TNFRSF1A-216ENST00000543995 GJA3Q9Y6H8 435 aa17.76■□□□□ 0.43
TNFRSF1A-216ENST00000543995 PSME4Q14997 1843 aa17.75■□□□□ 0.43
TNFRSF1A-216ENST00000543995 USP17L3A6NCW0 530 aa17.75■□□□□ 0.43
TNFRSF1A-216ENST00000543995 USP17L4A6NCW7 530 aa17.75■□□□□ 0.43
TNFRSF1A-216ENST00000543995 GTF2IP78347 998 aa17.75■□□□□ 0.43
TNFRSF1A-216ENST00000543995 TNIP1Q15025 636 aa17.75■□□□□ 0.43
TNFRSF1A-216ENST00000543995 USP17L1Q7RTZ2 530 aa17.75■□□□□ 0.43
TNFRSF1A-216ENST00000543995 TTLL5Q6EMB2 1281 aa17.74■□□□□ 0.43
TNFRSF1A-216ENST00000543995 PPP4R2Q9NY27 417 aa17.74■□□□□ 0.43
TNFRSF1A-216ENST00000543995 JAG2Q9Y219 1238 aa17.74■□□□□ 0.43
TNFRSF1A-216ENST00000543995 PSMD14O00487 310 aa17.73■□□□□ 0.43
TNFRSF1A-216ENST00000543995 UQCRFS1P1P0C7P4 283 aa17.73■□□□□ 0.43
TNFRSF1A-216ENST00000543995 CHAF1AQ13111 956 aaPredicted RBP17.73■□□□□ 0.43
TNFRSF1A-216ENST00000543995 LNPKQ9C0E8 428 aa17.73■□□□□ 0.43
TNFRSF1A-216ENST00000543995 SEMA3EO15041 775 aa17.72■□□□□ 0.43
TNFRSF1A-216ENST00000543995 DDNO94850 711 aaPredicted RBP17.72■□□□□ 0.43
TNFRSF1A-216ENST00000543995 NUCB1Q02818 461 aa17.72■□□□□ 0.43
TNFRSF1A-216ENST00000543995 STRIP1Q5VSL9 837 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms