RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 EYA2O00167 538 aa27.2■■□□□ 1.94
OTUB1-212ENST00000543988 FSTL1Q12841 308 aa27.2■■□□□ 1.94
OTUB1-212ENST00000543988 MTX1Q13505 466 aa27.2■■□□□ 1.94
OTUB1-212ENST00000543988 EAPPQ56P03 285 aaPredicted RBP27.2■■□□□ 1.94
OTUB1-212ENST00000543988 PODNQ7Z5L7 613 aa27.2■■□□□ 1.94
OTUB1-212ENST00000543988 VGLL2Q8N8G2 317 aa27.19■■□□□ 1.94
OTUB1-212ENST00000543988 SIL1Q9H173 461 aa27.19■■□□□ 1.94
OTUB1-212ENST00000543988 SHTN1A0MZ66 631 aa27.18■■□□□ 1.94
OTUB1-212ENST00000543988 VIL1P09327 827 aaKnown RBP27.18■■□□□ 1.94
OTUB1-212ENST00000543988 PA2G4Q9UQ80 394 aaKnown RBP27.18■■□□□ 1.94
OTUB1-212ENST00000543988 SRGAP3O43295 1099 aa27.17■■□□□ 1.94
OTUB1-212ENST00000543988 UBE4AQ14139 1066 aa27.17■■□□□ 1.94
OTUB1-212ENST00000543988 ATG9AQ7Z3C6 839 aa27.17■■□□□ 1.94
OTUB1-212ENST00000543988 PNMA8AQ86V59 439 aaPredicted RBP27.17■■□□□ 1.94
OTUB1-212ENST00000543988 LDHDQ86WU2 507 aa27.17■■□□□ 1.94
OTUB1-212ENST00000543988 USP17L3A6NCW0 530 aa27.16■■□□□ 1.94
OTUB1-212ENST00000543988 USP17L4A6NCW7 530 aa27.16■■□□□ 1.94
OTUB1-212ENST00000543988 ZBTB7BO15156 539 aaPredicted RBP27.16■■□□□ 1.94
OTUB1-212ENST00000543988 MS4A1P11836 297 aa27.16■■□□□ 1.94
OTUB1-212ENST00000543988 RPS12P25398 132 aaKnown RBP27.16■■□□□ 1.94
OTUB1-212ENST00000543988 CHADLQ6NUI6 762 aa27.16■■□□□ 1.94
OTUB1-212ENST00000543988 USP17L1Q7RTZ2 530 aa27.16■■□□□ 1.94
OTUB1-212ENST00000543988 MICALL2Q8IY33 904 aa27.16■■□□□ 1.94
OTUB1-212ENST00000543988 DPF2Q92785 391 aa27.16■■□□□ 1.94
OTUB1-212ENST00000543988 C1orf115Q9H7X2 142 aa27.16■■□□□ 1.94
OTUB1-212ENST00000543988 ZNF609O15014 1411 aa27.16■■□□□ 1.94
OTUB1-212ENST00000543988 CIAO1O76071 339 aa27.15■■□□□ 1.94
OTUB1-212ENST00000543988 RSBN1LQ6PCB5 846 aaPredicted RBP27.15■■□□□ 1.94
OTUB1-212ENST00000543988 ZNF804AQ7Z570 1209 aa27.15■■□□□ 1.94
OTUB1-212ENST00000543988 COPRSQ9NQ92 184 aa27.15■■□□□ 1.94
OTUB1-212ENST00000543988 ADARB2Q9NS39 739 aaKnown RBP27.15■■□□□ 1.94
OTUB1-212ENST00000543988 CNOT7Q9UIV1 285 aaKnown RBP27.15■■□□□ 1.94
OTUB1-212ENST00000543988 ADAMTSL1Q8N6G6 1762 aa27.14■■□□□ 1.94
OTUB1-212ENST00000543988 PDE8BO95263 885 aa27.14■■□□□ 1.94
OTUB1-212ENST00000543988 CD209Q9NNX6 404 aa27.14■■□□□ 1.94
OTUB1-212ENST00000543988 FBXO3Q9UK99 471 aa27.14■■□□□ 1.94
OTUB1-212ENST00000543988 PNMA6EA0A0J9YXQ4 647 aa27.13■■□□□ 1.93
OTUB1-212ENST00000543988 DACT2Q5SW24 774 aa27.13■■□□□ 1.93
OTUB1-212ENST00000543988 USP50Q70EL3 339 aaPredicted RBP27.13■■□□□ 1.93
OTUB1-212ENST00000543988 TRPM4Q8TD43 1214 aa27.13■■□□□ 1.93
OTUB1-212ENST00000543988 FBXW7Q969H0 707 aa27.13■■□□□ 1.93
OTUB1-212ENST00000543988 HSPA6P17066 643 aa27.12■■□□□ 1.93
OTUB1-212ENST00000543988 GYG1P46976 350 aa27.12■■□□□ 1.93
OTUB1-212ENST00000543988 PUM3Q15397 648 aaKnown RBP27.12■■□□□ 1.93
OTUB1-212ENST00000543988 MXD3Q9BW11 206 aa27.12■■□□□ 1.93
OTUB1-212ENST00000543988 CLEC11AQ9Y240 323 aa27.12■■□□□ 1.93
OTUB1-212ENST00000543988 MVPQ14764 893 aaKnown RBP27.11■■□□□ 1.93
OTUB1-212ENST00000543988 C20orf194Q5TEA3 1177 aa27.11■■□□□ 1.93
OTUB1-212ENST00000543988 STRIP1Q5VSL9 837 aa27.11■■□□□ 1.93
OTUB1-212ENST00000543988 AGBL3Q8NEM8 1001 aa27.11■■□□□ 1.93
OTUB1-212ENST00000543988 GMLQ99445 158 aa27.11■■□□□ 1.93
OTUB1-212ENST00000543988 COG6Q9Y2V7 657 aa27.11■■□□□ 1.93
OTUB1-212ENST00000543988 H7C1D1 291 aa27.1■■□□□ 1.93
OTUB1-212ENST00000543988 IL1R1P14778 569 aa27.1■■□□□ 1.93
OTUB1-212ENST00000543988 FGFR2P21802 821 aa27.1■■□□□ 1.93
OTUB1-212ENST00000543988 IL15P40933 162 aaPredicted RBP27.1■■□□□ 1.93
OTUB1-212ENST00000543988 FAM84BQ96KN1 310 aaPredicted RBP27.1■■□□□ 1.93
OTUB1-212ENST00000543988 PSME4Q14997 1843 aa27.09■■□□□ 1.93
OTUB1-212ENST00000543988 GTF2IP78347 998 aa27.09■■□□□ 1.93
OTUB1-212ENST00000543988 MAP1SQ66K74 1059 aaPredicted RBP27.09■■□□□ 1.93
OTUB1-212ENST00000543988 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.09■■□□□ 1.93
OTUB1-212ENST00000543988 EGFRP00533 1210 aa27.08■■□□□ 1.93
OTUB1-212ENST00000543988 HIBADHP31937 336 aaKnown RBP27.08■■□□□ 1.93
OTUB1-212ENST00000543988 HIRAP54198 1017 aaPredicted RBP27.08■■□□□ 1.93
OTUB1-212ENST00000543988 TTLL5Q6EMB2 1281 aa27.08■■□□□ 1.93
OTUB1-212ENST00000543988 SAMD7Q7Z3H4 446 aa27.08■■□□□ 1.93
OTUB1-212ENST00000543988 CEP126Q9P2H0 1117 aa27.08■■□□□ 1.93
OTUB1-212ENST00000543988 ZNF646O15015 1829 aaPredicted RBP27.08■■□□□ 1.93
OTUB1-212ENST00000543988 ZNF280AP59817 542 aaPredicted RBP27.07■■□□□ 1.92
OTUB1-212ENST00000543988 POLA2Q14181 598 aa27.07■■□□□ 1.92
OTUB1-212ENST00000543988 TBC1D10BQ4KMP7 808 aaPredicted RBP27.07■■□□□ 1.92
OTUB1-212ENST00000543988 IFIT1P09914 478 aaKnown RBP27.06■■□□□ 1.92
OTUB1-212ENST00000543988 PDE3AQ14432 1141 aa27.06■■□□□ 1.92
OTUB1-212ENST00000543988 FBXO33Q7Z6M2 555 aa27.06■■□□□ 1.92
OTUB1-212ENST00000543988 LPIN2Q92539 896 aa27.06■■□□□ 1.92
OTUB1-212ENST00000543988 DDX19BQ9UMR2 479 aa27.06■■□□□ 1.92
OTUB1-212ENST00000543988 JAG2Q9Y219 1238 aa27.06■■□□□ 1.92
OTUB1-212ENST00000543988 MYO3BQ8WXR4 1341 aa27.06■■□□□ 1.92
OTUB1-212ENST00000543988 USP17L8P0C7I0 530 aa27.05■■□□□ 1.92
OTUB1-212ENST00000543988 SLC5A1P13866 664 aa27.05■■□□□ 1.92
OTUB1-212ENST00000543988 ATP8B2P98198 1209 aa27.05■■□□□ 1.92
OTUB1-212ENST00000543988 ATP2B3Q16720 1220 aa27.05■■□□□ 1.92
OTUB1-212ENST00000543988 TDRD7Q8NHU6 1098 aaKnown RBP27.05■■□□□ 1.92
OTUB1-212ENST00000543988 SSH3Q8TE77 659 aa27.05■■□□□ 1.92
OTUB1-212ENST00000543988 CEP85Q6P2H3 762 aa27.04■■□□□ 1.92
OTUB1-212ENST00000543988 VPS37DQ86XT2 251 aa27.04■■□□□ 1.92
OTUB1-212ENST00000543988 CERS5Q8N5B7 392 aa27.04■■□□□ 1.92
OTUB1-212ENST00000543988 ITGBL1O95965 494 aaPredicted RBP27.03■■□□□ 1.92
OTUB1-212ENST00000543988 BCAMP50895 628 aa27.03■■□□□ 1.92
OTUB1-212ENST00000543988 KIF4BQ2VIQ3 1234 aa27.03■■□□□ 1.92
OTUB1-212ENST00000543988 CAVIN4Q5BKX8 364 aa27.03■■□□□ 1.92
OTUB1-212ENST00000543988 RBM26Q5T8P6 1007 aaKnown RBP27.03■■□□□ 1.92
OTUB1-212ENST00000543988 CNTROBQ8N137 903 aa27.03■■□□□ 1.92
OTUB1-212ENST00000543988 PASKQ96RG2 1323 aa27.02■■□□□ 1.92
OTUB1-212ENST00000543988 SASH1O94885 1247 aa27.02■■□□□ 1.92
OTUB1-212ENST00000543988 TFCP2Q12800 502 aa27.02■■□□□ 1.92
OTUB1-212ENST00000543988 ZBTB40Q9NUA8 1239 aa27.02■■□□□ 1.92
OTUB1-212ENST00000543988 IQSEC3Q9UPP2 1182 aaPredicted RBP27.02■■□□□ 1.92
OTUB1-212ENST00000543988 FAM205AQ6ZU69 1335 aa27.01■■□□□ 1.91
OTUB1-212ENST00000543988 APLP1P51693 650 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms