RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 NEFLP07196 543 aa16.84■□□□□ 0.29
SP140-213ENST00000543928 FGFR2P21802 821 aa16.84■□□□□ 0.29
SP140-213ENST00000543928 ATP2B3Q16720 1220 aa16.84■□□□□ 0.29
SP140-213ENST00000543928 DOK7Q18PE1 504 aa16.84■□□□□ 0.29
SP140-213ENST00000543928 TXNRD3Q86VQ6 643 aa16.84■□□□□ 0.29
SP140-213ENST00000543928 ERC1Q8IUD2 1116 aa16.84■□□□□ 0.29
SP140-213ENST00000543928 NIM1KQ8IY84 436 aa16.84■□□□□ 0.29
SP140-213ENST00000543928 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.84■□□□□ 0.29
SP140-213ENST00000543928 IRS2Q9Y4H2 1338 aa16.84■□□□□ 0.29
SP140-213ENST00000543928 APBB1O00213 710 aa16.83■□□□□ 0.28
SP140-213ENST00000543928 IFIT1P09914 478 aaKnown RBP16.83■□□□□ 0.28
SP140-213ENST00000543928 SLC5A1P13866 664 aa16.83■□□□□ 0.28
SP140-213ENST00000543928 C15orf52Q6ZUT6 534 aaKnown RBP16.83■□□□□ 0.28
SP140-213ENST00000543928 LPIN2Q92539 896 aa16.83■□□□□ 0.28
SP140-213ENST00000543928 DCTPP1Q9H773 170 aa16.83■□□□□ 0.28
SP140-213ENST00000543928 DBNDD1Q9H9R9 158 aa16.83■□□□□ 0.28
SP140-213ENST00000543928 AKAP2Q9Y2D5 859 aa16.83■□□□□ 0.28
SP140-213ENST00000543928 TIAM2Q8IVF5 1701 aa16.82■□□□□ 0.28
SP140-213ENST00000543928 G3V3G9 751 aa16.82■□□□□ 0.28
SP140-213ENST00000543928 HDAC1Q13547 482 aaPredicted RBP16.82■□□□□ 0.28
SP140-213ENST00000543928 DCAF8Q5TAQ9 597 aa16.82■□□□□ 0.28
SP140-213ENST00000543928 ZNRF3Q9ULT6 936 aa16.82■□□□□ 0.28
SP140-213ENST00000543928 ECE2O60344 883 aa16.81■□□□□ 0.28
SP140-213ENST00000543928 RAB11FIP3O75154 756 aa16.81■□□□□ 0.28
SP140-213ENST00000543928 TIMM10P62072 90 aa16.81■□□□□ 0.28
SP140-213ENST00000543928 RHPN1Q8TCX5 695 aa16.81■□□□□ 0.28
SP140-213ENST00000543928 ZC3H4Q9UPT8 1303 aaKnown RBP16.8■□□□□ 0.28
SP140-213ENST00000543928 A0A1B0GUL7 405 aa16.8■□□□□ 0.28
SP140-213ENST00000543928 FZD9O00144 591 aa16.8■□□□□ 0.28
SP140-213ENST00000543928 GYG1P46976 350 aa16.8■□□□□ 0.28
SP140-213ENST00000543928 TNNI3KQ59H18 835 aa16.8■□□□□ 0.28
SP140-213ENST00000543928 ZNF804AQ7Z570 1209 aa16.8■□□□□ 0.28
SP140-213ENST00000543928 KIF1BPQ96EK5 621 aa16.8■□□□□ 0.28
SP140-213ENST00000543928 FAM84BQ96KN1 310 aaPredicted RBP16.8■□□□□ 0.28
SP140-213ENST00000543928 NEUROD6Q96NK8 337 aa16.8■□□□□ 0.28
SP140-213ENST00000543928 COA1Q9GZY4 146 aa16.8■□□□□ 0.28
SP140-213ENST00000543928 RWDD1Q9H446 243 aaPredicted RBP16.8■□□□□ 0.28
SP140-213ENST00000543928 GPR108Q9NPR9 543 aa16.8■□□□□ 0.28
SP140-213ENST00000543928 FPGT-TNNI3KV9GXZ4 949 aa16.8■□□□□ 0.28
SP140-213ENST00000543928 ZNF609O15014 1411 aa16.79■□□□□ 0.28
SP140-213ENST00000543928 YDJCA8MPS7 323 aa16.79■□□□□ 0.28
SP140-213ENST00000543928 ADORA1P30542 326 aa16.79■□□□□ 0.28
SP140-213ENST00000543928 HIBADHP31937 336 aaKnown RBP16.79■□□□□ 0.28
SP140-213ENST00000543928 EIF6P56537 245 aaKnown RBP16.79■□□□□ 0.28
SP140-213ENST00000543928 CAVIN4Q5BKX8 364 aa16.79■□□□□ 0.28
SP140-213ENST00000543928 PODNQ7Z5L7 613 aa16.79■□□□□ 0.28
SP140-213ENST00000543928 IL1RAPL2Q9NP60 686 aa16.79■□□□□ 0.28
SP140-213ENST00000543928 ZNF541Q9H0D2 1346 aa16.78■□□□□ 0.28
SP140-213ENST00000543928 IGHDP01880 384 aa16.78■□□□□ 0.28
SP140-213ENST00000543928 BCAMP50895 628 aa16.78■□□□□ 0.28
SP140-213ENST00000543928 FBXO33Q7Z6M2 555 aa16.78■□□□□ 0.28
SP140-213ENST00000543928 VPS37DQ86XT2 251 aa16.78■□□□□ 0.28
SP140-213ENST00000543928 XAGE2Q96GT9 111 aa16.78■□□□□ 0.28
SP140-213ENST00000543928 LRRCC1Q9C099 1032 aa16.78■□□□□ 0.28
SP140-213ENST00000543928 CD209Q9NNX6 404 aa16.78■□□□□ 0.28
SP140-213ENST00000543928 KCNQ5Q9NR82 932 aa16.78■□□□□ 0.28
SP140-213ENST00000543928 ARAP2Q8WZ64 1704 aa16.77■□□□□ 0.28
SP140-213ENST00000543928 RAD17O75943 681 aa16.77■□□□□ 0.28
SP140-213ENST00000543928 CXCL9Q07325 125 aa16.77■□□□□ 0.28
SP140-213ENST00000543928 EAF2Q96CJ1 260 aaPredicted RBP16.77■□□□□ 0.28
SP140-213ENST00000543928 GCC1Q96CN9 775 aa16.77■□□□□ 0.28
SP140-213ENST00000543928 BCL11AQ9H165 835 aa16.77■□□□□ 0.28
SP140-213ENST00000543928 SCN9AQ15858 1988 aa16.77■□□□□ 0.27
SP140-213ENST00000543928 SMARCA5O60264 1052 aaPredicted RBP16.76■□□□□ 0.27
SP140-213ENST00000543928 IL1R1P14778 569 aa16.76■□□□□ 0.27
SP140-213ENST00000543928 AACSQ86V21 672 aa16.76■□□□□ 0.27
SP140-213ENST00000543928 CLASRPQ8N2M8 674 aaKnown RBP16.76■□□□□ 0.27
SP140-213ENST00000543928 CCDC8Q9H0W5 538 aaPredicted RBP16.76■□□□□ 0.27
SP140-213ENST00000543928 IQSEC3Q9UPP2 1182 aaPredicted RBP16.76■□□□□ 0.27
SP140-213ENST00000543928 PHKA1P46020 1223 aa16.75■□□□□ 0.27
SP140-213ENST00000543928 GORABQ5T7V8 394 aa16.75■□□□□ 0.27
SP140-213ENST00000543928 CCDC102BQ68D86 513 aa16.75■□□□□ 0.27
SP140-213ENST00000543928 CIAPIN1Q6FI81 312 aa16.75■□□□□ 0.27
SP140-213ENST00000543928 DPY19L2Q6NUT2 758 aa16.75■□□□□ 0.27
SP140-213ENST00000543928 TDRD7Q8NHU6 1098 aaKnown RBP16.75■□□□□ 0.27
SP140-213ENST00000543928 DBNDD2Q9BQY9 259 aa16.75■□□□□ 0.27
SP140-213ENST00000543928 TLR7Q9NYK1 1049 aaKnown RBP16.75■□□□□ 0.27
SP140-213ENST00000543928 DBNLQ9UJU6 430 aaKnown RBP16.75■□□□□ 0.27
SP140-213ENST00000543928 GJA3Q9Y6H8 435 aa16.75■□□□□ 0.27
SP140-213ENST00000543928 USP17L3A6NCW0 530 aa16.74■□□□□ 0.27
SP140-213ENST00000543928 USP17L4A6NCW7 530 aa16.74■□□□□ 0.27
SP140-213ENST00000543928 GLTPD2A6NH11 291 aa16.74■□□□□ 0.27
SP140-213ENST00000543928 PSMD14O00487 310 aa16.74■□□□□ 0.27
SP140-213ENST00000543928 DDNO94850 711 aaPredicted RBP16.74■□□□□ 0.27
SP140-213ENST00000543928 YY1P25490 414 aa16.74■□□□□ 0.27
SP140-213ENST00000543928 TNIP1Q15025 636 aa16.74■□□□□ 0.27
SP140-213ENST00000543928 USP17L1Q7RTZ2 530 aa16.74■□□□□ 0.27
SP140-213ENST00000543928 SMC5Q8IY18 1101 aa16.74■□□□□ 0.27
SP140-213ENST00000543928 FBXW7Q969H0 707 aa16.74■□□□□ 0.27
SP140-213ENST00000543928 GNL3LQ9NVN8 582 aaKnown RBP16.74■□□□□ 0.27
SP140-213ENST00000543928 FRAT2O75474 233 aaPredicted RBP16.73■□□□□ 0.27
SP140-213ENST00000543928 IFIT2P09913 472 aaKnown RBP16.73■□□□□ 0.27
SP140-213ENST00000543928 GTF2IP78347 998 aa16.73■□□□□ 0.27
SP140-213ENST00000543928 GPC2Q8N158 579 aa16.73■□□□□ 0.27
SP140-213ENST00000543928 JAG2Q9Y219 1238 aa16.73■□□□□ 0.27
SP140-213ENST00000543928 CCDC158Q5M9N0 1113 aa16.72■□□□□ 0.27
SP140-213ENST00000543928 ANKRD45Q5TZF3 282 aa16.72■□□□□ 0.27
SP140-213ENST00000543928 STRIP1Q5VSL9 837 aa16.72■□□□□ 0.27
SP140-213ENST00000543928 TTLL5Q6EMB2 1281 aa16.72■□□□□ 0.27
SP140-213ENST00000543928 PSME4Q14997 1843 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms