RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 LRRFIP2Q9Y608 721 aaKnown RBP20.34■□□□□ 0.85
CIT-212ENST00000543239 USP17L3A6NCW0 530 aa20.33■□□□□ 0.85
CIT-212ENST00000543239 USP17L4A6NCW7 530 aa20.33■□□□□ 0.85
CIT-212ENST00000543239 H7C1D1 291 aa20.33■□□□□ 0.85
CIT-212ENST00000543239 KLRK1P26718 216 aa20.33■□□□□ 0.85
CIT-212ENST00000543239 RFX5P48382 616 aaPredicted RBP20.33■□□□□ 0.85
CIT-212ENST00000543239 UBE4AQ14139 1066 aa20.33■□□□□ 0.85
CIT-212ENST00000543239 USP17L1Q7RTZ2 530 aa20.33■□□□□ 0.85
CIT-212ENST00000543239 MICALL2Q8IY33 904 aa20.33■□□□□ 0.85
CIT-212ENST00000543239 AGBL3Q8NEM8 1001 aa20.33■□□□□ 0.85
CIT-212ENST00000543239 RSBN1LQ6PCB5 846 aaPredicted RBP20.32■□□□□ 0.84
CIT-212ENST00000543239 FTSJ3Q8IY81 847 aaKnown RBP20.32■□□□□ 0.84
CIT-212ENST00000543239 TMEM57Q8N5G2 664 aa20.32■□□□□ 0.84
CIT-212ENST00000543239 FBXO3Q9UK99 471 aa20.32■□□□□ 0.84
CIT-212ENST00000543239 SNAP23O00161 211 aa20.31■□□□□ 0.84
CIT-212ENST00000543239 PLIN1O60240 522 aa20.31■□□□□ 0.84
CIT-212ENST00000543239 PTPN12Q05209 780 aaKnown RBP20.31■□□□□ 0.84
CIT-212ENST00000543239 LRRC24Q50LG9 513 aa20.31■□□□□ 0.84
CIT-212ENST00000543239 ZNF804AQ7Z570 1209 aa20.31■□□□□ 0.84
CIT-212ENST00000543239 DZIP1LQ8IYY4 767 aaKnown RBP20.31■□□□□ 0.84
CIT-212ENST00000543239 KLHDC4Q8TBB5 520 aa20.31■□□□□ 0.84
CIT-212ENST00000543239 MTX1Q13505 466 aa20.3■□□□□ 0.84
CIT-212ENST00000543239 METTL24Q5JXM2 366 aa20.3■□□□□ 0.84
CIT-212ENST00000543239 STRIP1Q5VSL9 837 aa20.3■□□□□ 0.84
CIT-212ENST00000543239 CD209Q9NNX6 404 aa20.3■□□□□ 0.84
CIT-212ENST00000543239 MYO3BQ8WXR4 1341 aa20.29■□□□□ 0.84
CIT-212ENST00000543239 PASKQ96RG2 1323 aa20.29■□□□□ 0.84
CIT-212ENST00000543239 EYA2O00167 538 aa20.29■□□□□ 0.84
CIT-212ENST00000543239 ITGBL1O95965 494 aaPredicted RBP20.29■□□□□ 0.84
CIT-212ENST00000543239 MAP1SQ66K74 1059 aaPredicted RBP20.29■□□□□ 0.84
CIT-212ENST00000543239 CNTROBQ8N137 903 aa20.29■□□□□ 0.84
CIT-212ENST00000543239 VGLL2Q8N8G2 317 aa20.29■□□□□ 0.84
CIT-212ENST00000543239 ZC3H15Q8WU90 426 aaKnown RBP20.29■□□□□ 0.84
CIT-212ENST00000543239 GMLQ99445 158 aa20.29■□□□□ 0.84
CIT-212ENST00000543239 ZNF646O15015 1829 aaPredicted RBP20.29■□□□□ 0.84
CIT-212ENST00000543239 SHTN1A0MZ66 631 aa20.28■□□□□ 0.84
CIT-212ENST00000543239 CIAO1O76071 339 aa20.28■□□□□ 0.84
CIT-212ENST00000543239 PDE8BO95263 885 aa20.28■□□□□ 0.84
CIT-212ENST00000543239 GNAI2P04899 355 aa20.28■□□□□ 0.84
CIT-212ENST00000543239 IL1R1P14778 569 aa20.28■□□□□ 0.84
CIT-212ENST00000543239 DACT2Q5SW24 774 aa20.28■□□□□ 0.84
CIT-212ENST00000543239 TRPM4Q8TD43 1214 aa20.28■□□□□ 0.84
CIT-212ENST00000543239 PGAP2Q9UHJ9 254 aa20.28■□□□□ 0.84
CIT-212ENST00000543239 MS4A1P11836 297 aa20.27■□□□□ 0.84
CIT-212ENST00000543239 ZNF280AP59817 542 aaPredicted RBP20.27■□□□□ 0.84
CIT-212ENST00000543239 TTLL5Q6EMB2 1281 aa20.27■□□□□ 0.84
CIT-212ENST00000543239 RCAN3Q9UKA8 241 aa20.27■□□□□ 0.84
CIT-212ENST00000543239 CEP350Q5VT06 3117 aa20.26■□□□□ 0.83
CIT-212ENST00000543239 RLBP1P12271 317 aa20.26■□□□□ 0.83
CIT-212ENST00000543239 HIRAP54198 1017 aaPredicted RBP20.26■□□□□ 0.83
CIT-212ENST00000543239 ATG9AQ7Z3C6 839 aa20.26■□□□□ 0.83
CIT-212ENST00000543239 SAMD7Q7Z3H4 446 aa20.26■□□□□ 0.83
CIT-212ENST00000543239 COPRSQ9NQ92 184 aa20.26■□□□□ 0.83
CIT-212ENST00000543239 USP17L8P0C7I0 530 aa20.25■□□□□ 0.83
CIT-212ENST00000543239 MMP14P50281 582 aa20.25■□□□□ 0.83
CIT-212ENST00000543239 GTF2IP78347 998 aa20.25■□□□□ 0.83
CIT-212ENST00000543239 PUM3Q15397 648 aaKnown RBP20.25■□□□□ 0.83
CIT-212ENST00000543239 ITPRIPQ8IWB1 547 aa20.25■□□□□ 0.83
CIT-212ENST00000543239 FBXW7Q969H0 707 aa20.25■□□□□ 0.83
CIT-212ENST00000543239 SRGAP3O43295 1099 aa20.24■□□□□ 0.83
CIT-212ENST00000543239 HIBADHP31937 336 aaKnown RBP20.24■□□□□ 0.83
CIT-212ENST00000543239 KIF4BQ2VIQ3 1234 aa20.24■□□□□ 0.83
CIT-212ENST00000543239 TBC1D10BQ4KMP7 808 aaPredicted RBP20.24■□□□□ 0.83
CIT-212ENST00000543239 FAM84BQ96KN1 310 aaPredicted RBP20.24■□□□□ 0.83
CIT-212ENST00000543239 SIL1Q9H173 461 aa20.24■□□□□ 0.83
CIT-212ENST00000543239 EGFRP00533 1210 aa20.23■□□□□ 0.83
CIT-212ENST00000543239 FGFR2P21802 821 aa20.23■□□□□ 0.83
CIT-212ENST00000543239 IL15P40933 162 aaPredicted RBP20.23■□□□□ 0.83
CIT-212ENST00000543239 GYG1P46976 350 aa20.23■□□□□ 0.83
CIT-212ENST00000543239 CREBZFQ9NS37 354 aa20.23■□□□□ 0.83
CIT-212ENST00000543239 ZBTB7BO15156 539 aaPredicted RBP20.22■□□□□ 0.83
CIT-212ENST00000543239 SASH1O94885 1247 aa20.22■□□□□ 0.83
CIT-212ENST00000543239 IFIT1P09914 478 aaKnown RBP20.22■□□□□ 0.83
CIT-212ENST00000543239 FKBP1AP62942 108 aaKnown RBP20.22■□□□□ 0.83
CIT-212ENST00000543239 CAVIN4Q5BKX8 364 aa20.22■□□□□ 0.83
CIT-212ENST00000543239 OGFOD1Q8N543 542 aa20.22■□□□□ 0.83
CIT-212ENST00000543239 TDRD7Q8NHU6 1098 aaKnown RBP20.22■□□□□ 0.83
CIT-212ENST00000543239 MXD3Q9BW11 206 aa20.22■□□□□ 0.83
CIT-212ENST00000543239 MYOZ2Q9NPC6 264 aa20.22■□□□□ 0.83
CIT-212ENST00000543239 PA2G4Q9UQ80 394 aaKnown RBP20.22■□□□□ 0.83
CIT-212ENST00000543239 HTRA3P83110 453 aa20.21■□□□□ 0.83
CIT-212ENST00000543239 RBM26Q5T8P6 1007 aaKnown RBP20.21■□□□□ 0.83
CIT-212ENST00000543239 CDC37L1Q7L3B6 337 aa20.21■□□□□ 0.83
CIT-212ENST00000543239 FBXO33Q7Z6M2 555 aa20.21■□□□□ 0.83
CIT-212ENST00000543239 DNAJC5GQ8N7S2 189 aa20.21■□□□□ 0.83
CIT-212ENST00000543239 PANK1Q8TE04 598 aa20.21■□□□□ 0.83
CIT-212ENST00000543239 LPIN2Q92539 896 aa20.21■□□□□ 0.83
CIT-212ENST00000543239 CEP126Q9P2H0 1117 aa20.21■□□□□ 0.83
CIT-212ENST00000543239 FAM205AQ6ZU69 1335 aa20.21■□□□□ 0.83
CIT-212ENST00000543239 TMEM88BA6NKF7 163 aa20.2■□□□□ 0.82
CIT-212ENST00000543239 SLC5A1P13866 664 aa20.2■□□□□ 0.82
CIT-212ENST00000543239 VPS37DQ86XT2 251 aa20.2■□□□□ 0.82
CIT-212ENST00000543239 HDAC9Q9UKV0 1011 aa20.2■□□□□ 0.82
CIT-212ENST00000543239 PNMA6EA0A0J9YXQ4 647 aa20.19■□□□□ 0.82
CIT-212ENST00000543239 DCPSQ96C86 337 aaKnown RBP20.19■□□□□ 0.82
CIT-212ENST00000543239 GLIS2Q9BZE0 524 aaPredicted RBP20.19■□□□□ 0.82
CIT-212ENST00000543239 ATP2B3Q16720 1220 aa20.18■□□□□ 0.82
CIT-212ENST00000543239 KIAA0825Q8IV33 1275 aa20.18■□□□□ 0.82
CIT-212ENST00000543239 CERS5Q8N5B7 392 aa20.18■□□□□ 0.82
CIT-212ENST00000543239 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms