RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 SH2B1Q9NRF2 756 aaPredicted RBP9.36□□□□□ -0.91
XRCC4-206ENST00000542685 SALL4Q9UJQ4 1053 aa9.36□□□□□ -0.91
XRCC4-206ENST00000542685 USTQ9Y2C2 406 aa9.36□□□□□ -0.91
XRCC4-206ENST00000542685 FAM177BA6PVY3 158 aa9.35□□□□□ -0.91
XRCC4-206ENST00000542685 H2AFB1P0C5Y9 115 aa9.35□□□□□ -0.91
XRCC4-206ENST00000542685 H2AFB2P0C5Z0 115 aa9.35□□□□□ -0.91
XRCC4-206ENST00000542685 GALNT11Q8NCW6 608 aa9.35□□□□□ -0.91
XRCC4-206ENST00000542685 DCAF11Q8TEB1 546 aa9.35□□□□□ -0.91
XRCC4-206ENST00000542685 CARD10Q9BWT7 1032 aa9.35□□□□□ -0.91
XRCC4-206ENST00000542685 TRPA1O75762 1119 aa9.34□□□□□ -0.91
XRCC4-206ENST00000542685 PTPRAP18433 802 aa9.34□□□□□ -0.91
XRCC4-206ENST00000542685 Q8N3U1 123 aa9.34□□□□□ -0.91
XRCC4-206ENST00000542685 CHRDQ9H2X0 955 aa9.34□□□□□ -0.91
XRCC4-206ENST00000542685 F8W735 103 aaPredicted RBP9.33□□□□□ -0.92
XRCC4-206ENST00000542685 FZD6O60353 706 aa9.33□□□□□ -0.92
XRCC4-206ENST00000542685 EPHA1P21709 976 aa9.33□□□□□ -0.92
XRCC4-206ENST00000542685 FAM117BQ6P1L5 589 aa9.33□□□□□ -0.92
XRCC4-206ENST00000542685 TMEM130Q8N3G9 435 aa9.33□□□□□ -0.92
XRCC4-206ENST00000542685 PMEPA1Q969W9 287 aa9.33□□□□□ -0.92
XRCC4-206ENST00000542685 CCDC87Q9NVE4 849 aa9.33□□□□□ -0.92
XRCC4-206ENST00000542685 EREGO14944 169 aa9.32□□□□□ -0.92
XRCC4-206ENST00000542685 PHACTR2O75167 634 aa9.32□□□□□ -0.92
XRCC4-206ENST00000542685 TNFRSF21O75509 655 aa9.32□□□□□ -0.92
XRCC4-206ENST00000542685 CD68P34810 354 aaPredicted RBP9.32□□□□□ -0.92
XRCC4-206ENST00000542685 USP5P45974 858 aa9.32□□□□□ -0.92
XRCC4-206ENST00000542685 XP32Q5T750 250 aa9.32□□□□□ -0.92
XRCC4-206ENST00000542685 B4GALNT3Q6L9W6 998 aa9.32□□□□□ -0.92
XRCC4-206ENST00000542685 ERICH6Q7L0X2 663 aa9.32□□□□□ -0.92
XRCC4-206ENST00000542685 AGGF1Q8N302 714 aaeCLIP9.32□□□□□ -0.92
XRCC4-206ENST00000542685 DZANK1Q9NVP4 752 aa9.32□□□□□ -0.92
XRCC4-206ENST00000542685 FOXD3Q9UJU5 478 aaPredicted RBP9.32□□□□□ -0.92
XRCC4-206ENST00000542685 FSCN2O14926 492 aa9.31□□□□□ -0.92
XRCC4-206ENST00000542685 GLB1P16278 677 aa9.31□□□□□ -0.92
XRCC4-206ENST00000542685 EHHADHQ08426 723 aa9.31□□□□□ -0.92
XRCC4-206ENST00000542685 FOXD4L6Q3SYB3 417 aaPredicted RBP9.31□□□□□ -0.92
XRCC4-206ENST00000542685 FOXD4L3Q6VB84 417 aaPredicted RBP9.31□□□□□ -0.92
XRCC4-206ENST00000542685 HHIPQ96QV1 700 aa9.31□□□□□ -0.92
XRCC4-206ENST00000542685 ADAM19Q9H013 955 aa9.31□□□□□ -0.92
XRCC4-206ENST00000542685 KCNK4Q9NYG8 393 aa9.31□□□□□ -0.92
XRCC4-206ENST00000542685 NFKBIEO00221 500 aa9.3□□□□□ -0.92
XRCC4-206ENST00000542685 PDE2AO00408 941 aaPredicted RBP9.3□□□□□ -0.92
XRCC4-206ENST00000542685 WISP1O95388 367 aa9.3□□□□□ -0.92
XRCC4-206ENST00000542685 SERPINB4P48594 390 aa9.3□□□□□ -0.92
XRCC4-206ENST00000542685 SNX29Q8TEQ0 813 aa9.3□□□□□ -0.92
XRCC4-206ENST00000542685 H3BRB1 525 aa9.29□□□□□ -0.92
XRCC4-206ENST00000542685 DDX3YO15523 660 aaKnown RBP9.29□□□□□ -0.92
XRCC4-206ENST00000542685 CABP4P57796 275 aa9.29□□□□□ -0.92
XRCC4-206ENST00000542685 ACAD11Q709F0 780 aa9.29□□□□□ -0.92
XRCC4-206ENST00000542685 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.29□□□□□ -0.92
XRCC4-206ENST00000542685 DZIP1LQ8IYY4 767 aaKnown RBP9.29□□□□□ -0.92
XRCC4-206ENST00000542685 OSMRQ99650 979 aa9.29□□□□□ -0.92
XRCC4-206ENST00000542685 TUT1Q9H6E5 874 aaKnown RBP9.29□□□□□ -0.92
XRCC4-206ENST00000542685 SEC31BQ9NQW1 1179 aa9.29□□□□□ -0.92
XRCC4-206ENST00000542685 SCO2A0A1W2PP80 73 aa9.28□□□□□ -0.92
XRCC4-206ENST00000542685 ICMTO60725 284 aa9.28□□□□□ -0.92
XRCC4-206ENST00000542685 GJD3Q8N144 294 aa9.28□□□□□ -0.92
XRCC4-206ENST00000542685 KLHL23Q8NBE8 558 aa9.28□□□□□ -0.92
XRCC4-206ENST00000542685 KLHDC7BQ96G42 594 aa9.28□□□□□ -0.92
XRCC4-206ENST00000542685 ZKSCAN3Q9BRR0 538 aa9.28□□□□□ -0.92
XRCC4-206ENST00000542685 EGFL7Q9UHF1 273 aa9.28□□□□□ -0.92
XRCC4-206ENST00000542685 H3BRJ5 948 aa9.27□□□□□ -0.93
XRCC4-206ENST00000542685 TM4SF5O14894 197 aa9.27□□□□□ -0.93
XRCC4-206ENST00000542685 EDN3P14138 238 aa9.27□□□□□ -0.93
XRCC4-206ENST00000542685 DUOXA2Q1HG44 320 aa9.27□□□□□ -0.93
XRCC4-206ENST00000542685 GLYCTKQ8IVS8 523 aa9.27□□□□□ -0.93
XRCC4-206ENST00000542685 RETREG2Q8NC44 543 aa9.27□□□□□ -0.93
XRCC4-206ENST00000542685 SLC7A3Q8WY07 619 aa9.27□□□□□ -0.93
XRCC4-206ENST00000542685 PIP4K2BP78356 416 aa9.26□□□□□ -0.93
XRCC4-206ENST00000542685 PRR23CQ6ZRP0 262 aa9.26□□□□□ -0.93
XRCC4-206ENST00000542685 TMEM102Q8N9M5 508 aaPredicted RBP9.26□□□□□ -0.93
XRCC4-206ENST00000542685 LATS2Q9NRM7 1088 aa9.26□□□□□ -0.93
XRCC4-206ENST00000542685 ADAM11O75078 769 aa9.25□□□□□ -0.93
XRCC4-206ENST00000542685 Q6ZS46 218 aa9.25□□□□□ -0.93
XRCC4-206ENST00000542685 FOXD4L4Q8WXT5 416 aaPredicted RBP9.25□□□□□ -0.93
XRCC4-206ENST00000542685 NXPE3Q969Y0 559 aa9.25□□□□□ -0.93
XRCC4-206ENST00000542685 BRPF3Q9ULD4 1205 aa9.25□□□□□ -0.93
XRCC4-206ENST00000542685 TIMELESSQ9UNS1 1208 aa9.25□□□□□ -0.93
XRCC4-206ENST00000542685 AMOTL2Q9Y2J4 779 aa9.25□□□□□ -0.93
XRCC4-206ENST00000542685 POLR3DP05423 398 aaPredicted RBP9.24□□□□□ -0.93
XRCC4-206ENST00000542685 KIAA1211Q6ZU35 1233 aa9.24□□□□□ -0.93
XRCC4-206ENST00000542685 ASAP3Q8TDY4 903 aa9.24□□□□□ -0.93
XRCC4-206ENST00000542685 UBASH3BQ8TF42 649 aa9.24□□□□□ -0.93
XRCC4-206ENST00000542685 UBL7Q96S82 380 aaPredicted RBP9.24□□□□□ -0.93
XRCC4-206ENST00000542685 ZFYVE28Q9HCC9 887 aa9.24□□□□□ -0.93
XRCC4-206ENST00000542685 SOX13Q9UN79 622 aa9.24□□□□□ -0.93
XRCC4-206ENST00000542685 NLRP12P59046 1061 aa9.23□□□□□ -0.93
XRCC4-206ENST00000542685 ECM1Q16610 540 aa9.23□□□□□ -0.93
XRCC4-206ENST00000542685 BSNDQ8WZ55 320 aa9.23□□□□□ -0.93
XRCC4-206ENST00000542685 WNT8BQ93098 351 aa9.23□□□□□ -0.93
XRCC4-206ENST00000542685 PEAR1Q5VY43 1037 aaPredicted RBP9.22□□□□□ -0.93
XRCC4-206ENST00000542685 HGSNATQ68CP4 663 aa9.22□□□□□ -0.93
XRCC4-206ENST00000542685 CEP41Q9BYV8 373 aa9.22□□□□□ -0.93
XRCC4-206ENST00000542685 OSGEPQ9NPF4 335 aa9.22□□□□□ -0.93
XRCC4-206ENST00000542685 ARL4DP49703 201 aa9.21□□□□□ -0.94
XRCC4-206ENST00000542685 ARHGAP4P98171 946 aa9.21□□□□□ -0.94
XRCC4-206ENST00000542685 C19orf57Q0VDD7 668 aa9.21□□□□□ -0.94
XRCC4-206ENST00000542685 IKBKEQ14164 716 aa9.21□□□□□ -0.94
XRCC4-206ENST00000542685 VN1R5Q7Z5H4 357 aa9.21□□□□□ -0.94
XRCC4-206ENST00000542685 NDUFB5O43674 189 aa9.2□□□□□ -0.94
XRCC4-206ENST00000542685 SOX1O00570 391 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms