RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 SNAP23O00161 211 aa25.13■■□□□ 1.61
CACNA2D4-215ENST00000542340 PLIN1O60240 522 aa25.13■■□□□ 1.61
CACNA2D4-215ENST00000542340 KLRK1P26718 216 aa25.13■■□□□ 1.61
CACNA2D4-215ENST00000542340 USP17L1Q7RTZ2 530 aa25.13■■□□□ 1.61
CACNA2D4-215ENST00000542340 IRS2Q9Y4H2 1338 aa25.12■■□□□ 1.61
CACNA2D4-215ENST00000542340 RFX5P48382 616 aaPredicted RBP25.12■■□□□ 1.61
CACNA2D4-215ENST00000542340 MICALL2Q8IY33 904 aa25.12■■□□□ 1.61
CACNA2D4-215ENST00000542340 UBE4AQ14139 1066 aa25.11■■□□□ 1.61
CACNA2D4-215ENST00000542340 LRRC24Q50LG9 513 aa25.11■■□□□ 1.61
CACNA2D4-215ENST00000542340 RSBN1LQ6PCB5 846 aaPredicted RBP25.11■■□□□ 1.61
CACNA2D4-215ENST00000542340 TMEM57Q8N5G2 664 aa25.11■■□□□ 1.61
CACNA2D4-215ENST00000542340 AGBL3Q8NEM8 1001 aa25.11■■□□□ 1.61
CACNA2D4-215ENST00000542340 KLHDC4Q8TBB5 520 aa25.11■■□□□ 1.61
CACNA2D4-215ENST00000542340 ZNF609O15014 1411 aa25.11■■□□□ 1.61
CACNA2D4-215ENST00000542340 ITGBL1O95965 494 aaPredicted RBP25.1■■□□□ 1.61
CACNA2D4-215ENST00000542340 A0A1B0GUL6 1792 aa25.1■■□□□ 1.61
CACNA2D4-215ENST00000542340 CEP350Q5VT06 3117 aa25.1■■□□□ 1.61
CACNA2D4-215ENST00000542340 SHTN1A0MZ66 631 aa25.09■■□□□ 1.61
CACNA2D4-215ENST00000542340 PTPN12Q05209 780 aaKnown RBP25.09■■□□□ 1.61
CACNA2D4-215ENST00000542340 STRIP1Q5VSL9 837 aa25.09■■□□□ 1.61
CACNA2D4-215ENST00000542340 MAP1SQ66K74 1059 aaPredicted RBP25.09■■□□□ 1.61
CACNA2D4-215ENST00000542340 DZIP1LQ8IYY4 767 aaKnown RBP25.09■■□□□ 1.61
CACNA2D4-215ENST00000542340 CNTROBQ8N137 903 aa25.09■■□□□ 1.61
CACNA2D4-215ENST00000542340 CD209Q9NNX6 404 aa25.09■■□□□ 1.61
CACNA2D4-215ENST00000542340 EYA2O00167 538 aa25.08■■□□□ 1.61
CACNA2D4-215ENST00000542340 METTL24Q5JXM2 366 aa25.08■■□□□ 1.61
CACNA2D4-215ENST00000542340 ZNF804AQ7Z570 1209 aa25.08■■□□□ 1.61
CACNA2D4-215ENST00000542340 FTSJ3Q8IY81 847 aaKnown RBP25.08■■□□□ 1.61
CACNA2D4-215ENST00000542340 ZC3H15Q8WU90 426 aaKnown RBP25.08■■□□□ 1.61
CACNA2D4-215ENST00000542340 GMLQ99445 158 aa25.08■■□□□ 1.61
CACNA2D4-215ENST00000542340 PGAP2Q9UHJ9 254 aa25.08■■□□□ 1.61
CACNA2D4-215ENST00000542340 FBXO3Q9UK99 471 aa25.08■■□□□ 1.61
CACNA2D4-215ENST00000542340 PASKQ96RG2 1323 aa25.08■■□□□ 1.6
CACNA2D4-215ENST00000542340 PDE8BO95263 885 aa25.07■■□□□ 1.6
CACNA2D4-215ENST00000542340 HIRAP54198 1017 aaPredicted RBP25.07■■□□□ 1.6
CACNA2D4-215ENST00000542340 DACT2Q5SW24 774 aa25.07■■□□□ 1.6
CACNA2D4-215ENST00000542340 TRPM4Q8TD43 1214 aa25.07■■□□□ 1.6
CACNA2D4-215ENST00000542340 PSME4Q14997 1843 aa25.07■■□□□ 1.6
CACNA2D4-215ENST00000542340 GNAI2P04899 355 aa25.06■■□□□ 1.6
CACNA2D4-215ENST00000542340 IL1R1P14778 569 aa25.06■■□□□ 1.6
CACNA2D4-215ENST00000542340 MTX1Q13505 466 aa25.06■■□□□ 1.6
CACNA2D4-215ENST00000542340 TTLL5Q6EMB2 1281 aa25.06■■□□□ 1.6
CACNA2D4-215ENST00000542340 VGLL2Q8N8G2 317 aa25.06■■□□□ 1.6
CACNA2D4-215ENST00000542340 ZNF280AP59817 542 aaPredicted RBP25.05■■□□□ 1.6
CACNA2D4-215ENST00000542340 SAMD7Q7Z3H4 446 aa25.05■■□□□ 1.6
CACNA2D4-215ENST00000542340 MYO3BQ8WXR4 1341 aa25.05■■□□□ 1.6
CACNA2D4-215ENST00000542340 CIAO1O76071 339 aa25.04■■□□□ 1.6
CACNA2D4-215ENST00000542340 USP17L8P0C7I0 530 aa25.04■■□□□ 1.6
CACNA2D4-215ENST00000542340 RLBP1P12271 317 aa25.04■■□□□ 1.6
CACNA2D4-215ENST00000542340 GTF2IP78347 998 aa25.04■■□□□ 1.6
CACNA2D4-215ENST00000542340 RCAN3Q9UKA8 241 aa25.04■■□□□ 1.6
CACNA2D4-215ENST00000542340 HTRA3P83110 453 aa25.03■■□□□ 1.6
CACNA2D4-215ENST00000542340 TBC1D10BQ4KMP7 808 aaPredicted RBP25.03■■□□□ 1.6
CACNA2D4-215ENST00000542340 ATG9AQ7Z3C6 839 aa25.03■■□□□ 1.6
CACNA2D4-215ENST00000542340 FBXW7Q969H0 707 aa25.03■■□□□ 1.6
CACNA2D4-215ENST00000542340 COPRSQ9NQ92 184 aa25.03■■□□□ 1.6
CACNA2D4-215ENST00000542340 SRGAP3O43295 1099 aa25.02■■□□□ 1.6
CACNA2D4-215ENST00000542340 EGFRP00533 1210 aa25.02■■□□□ 1.6
CACNA2D4-215ENST00000542340 MS4A1P11836 297 aa25.02■■□□□ 1.6
CACNA2D4-215ENST00000542340 HIBADHP31937 336 aaKnown RBP25.02■■□□□ 1.6
CACNA2D4-215ENST00000542340 MMP14P50281 582 aa25.02■■□□□ 1.6
CACNA2D4-215ENST00000542340 RBM26Q5T8P6 1007 aaKnown RBP25.02■■□□□ 1.6
CACNA2D4-215ENST00000542340 DNAJC5GQ8N7S2 189 aa25.02■■□□□ 1.6
CACNA2D4-215ENST00000542340 FAM84BQ96KN1 310 aaPredicted RBP25.02■■□□□ 1.6
CACNA2D4-215ENST00000542340 GYG1P46976 350 aa25.01■■□□□ 1.59
CACNA2D4-215ENST00000542340 PUM3Q15397 648 aaKnown RBP25.01■■□□□ 1.59
CACNA2D4-215ENST00000542340 KIF4BQ2VIQ3 1234 aa25.01■■□□□ 1.59
CACNA2D4-215ENST00000542340 ITPRIPQ8IWB1 547 aa25.01■■□□□ 1.59
CACNA2D4-215ENST00000542340 MXD3Q9BW11 206 aa25.01■■□□□ 1.59
CACNA2D4-215ENST00000542340 SIL1Q9H173 461 aa25.01■■□□□ 1.59
CACNA2D4-215ENST00000542340 ZBTB7BO15156 539 aaPredicted RBP25■■□□□ 1.59
CACNA2D4-215ENST00000542340 SASH1O94885 1247 aa25■■□□□ 1.59
CACNA2D4-215ENST00000542340 FGFR2P21802 821 aa25■■□□□ 1.59
CACNA2D4-215ENST00000542340 IL15P40933 162 aaPredicted RBP25■■□□□ 1.59
CACNA2D4-215ENST00000542340 TDRD7Q8NHU6 1098 aaKnown RBP25■■□□□ 1.59
CACNA2D4-215ENST00000542340 CREBZFQ9NS37 354 aa25■■□□□ 1.59
CACNA2D4-215ENST00000542340 CAVIN4Q5BKX8 364 aa24.99■■□□□ 1.59
CACNA2D4-215ENST00000542340 FBXO33Q7Z6M2 555 aa24.99■■□□□ 1.59
CACNA2D4-215ENST00000542340 OGFOD1Q8N543 542 aa24.99■■□□□ 1.59
CACNA2D4-215ENST00000542340 MYOZ2Q9NPC6 264 aa24.99■■□□□ 1.59
CACNA2D4-215ENST00000542340 CEP126Q9P2H0 1117 aa24.99■■□□□ 1.59
CACNA2D4-215ENST00000542340 PA2G4Q9UQ80 394 aaKnown RBP24.99■■□□□ 1.59
CACNA2D4-215ENST00000542340 IFIT1P09914 478 aaKnown RBP24.98■■□□□ 1.59
CACNA2D4-215ENST00000542340 FKBP1AP62942 108 aaKnown RBP24.98■■□□□ 1.59
CACNA2D4-215ENST00000542340 CDC37L1Q7L3B6 337 aa24.98■■□□□ 1.59
CACNA2D4-215ENST00000542340 ZNF646O15015 1829 aaPredicted RBP24.98■■□□□ 1.59
CACNA2D4-215ENST00000542340 TMEM88BA6NKF7 163 aa24.97■■□□□ 1.59
CACNA2D4-215ENST00000542340 VPS37DQ86XT2 251 aa24.97■■□□□ 1.59
CACNA2D4-215ENST00000542340 PANK1Q8TE04 598 aa24.97■■□□□ 1.59
CACNA2D4-215ENST00000542340 LPIN2Q92539 896 aa24.97■■□□□ 1.59
CACNA2D4-215ENST00000542340 FAM205AQ6ZU69 1335 aa24.96■■□□□ 1.59
CACNA2D4-215ENST00000542340 GLIS2Q9BZE0 524 aaPredicted RBP24.96■■□□□ 1.59
CACNA2D4-215ENST00000542340 PNMA6EA0A0J9YXQ4 647 aa24.95■■□□□ 1.58
CACNA2D4-215ENST00000542340 TRAF5O00463 557 aa24.95■■□□□ 1.58
CACNA2D4-215ENST00000542340 SLC5A1P13866 664 aa24.95■■□□□ 1.58
CACNA2D4-215ENST00000542340 KIAA0825Q8IV33 1275 aa24.95■■□□□ 1.58
CACNA2D4-215ENST00000542340 CERS5Q8N5B7 392 aa24.95■■□□□ 1.58
CACNA2D4-215ENST00000542340 DCPSQ96C86 337 aaKnown RBP24.95■■□□□ 1.58
CACNA2D4-215ENST00000542340 HDAC9Q9UKV0 1011 aa24.95■■□□□ 1.58
CACNA2D4-215ENST00000542340 SCARF1Q14162 830 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms