RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 ADCY9O60503 1353 aa12.99□□□□□ -0.33
CDH3-203ENST00000542274 PCDH11XQ9BZA7 1347 aa12.98□□□□□ -0.33
CDH3-203ENST00000542274 PCDH11YQ9BZA8 1340 aa12.98□□□□□ -0.33
CDH3-203ENST00000542274 NEBLO76041 1014 aa12.98□□□□□ -0.33
CDH3-203ENST00000542274 ECM2O94769 699 aaPredicted RBP12.98□□□□□ -0.33
CDH3-203ENST00000542274 PDE1AP54750 535 aa12.98□□□□□ -0.33
CDH3-203ENST00000542274 CABP4P57796 275 aa12.98□□□□□ -0.33
CDH3-203ENST00000542274 ATP8B2P98198 1209 aa12.98□□□□□ -0.33
CDH3-203ENST00000542274 ADCY2Q08462 1091 aa12.98□□□□□ -0.33
CDH3-203ENST00000542274 CWF19L2Q2TBE0 894 aaKnown RBP12.98□□□□□ -0.33
CDH3-203ENST00000542274 ZNF790Q6PG37 636 aa12.98□□□□□ -0.33
CDH3-203ENST00000542274 CCDC191Q8NCU4 936 aa12.98□□□□□ -0.33
CDH3-203ENST00000542274 SRCIN1Q9C0H9 1055 aa12.98□□□□□ -0.33
CDH3-203ENST00000542274 CPSF2Q9P2I0 782 aaKnown RBP12.98□□□□□ -0.33
CDH3-203ENST00000542274 BMS1Q14692 1282 aaKnown RBP12.98□□□□□ -0.33
CDH3-203ENST00000542274 BEND3Q5T5X7 828 aa12.98□□□□□ -0.33
CDH3-203ENST00000542274 PPP1R42Q7Z4L9 355 aa12.98□□□□□ -0.33
CDH3-203ENST00000542274 APBB1IPQ7Z5R6 666 aaPredicted RBP12.98□□□□□ -0.33
CDH3-203ENST00000542274 NEK11Q8NG66 645 aa12.98□□□□□ -0.33
CDH3-203ENST00000542274 DNAAF4Q8WXU2 420 aa12.98□□□□□ -0.33
CDH3-203ENST00000542274 PIBF1Q8WXW3 757 aa12.98□□□□□ -0.33
CDH3-203ENST00000542274 MTA3Q9BTC8 594 aa12.98□□□□□ -0.33
CDH3-203ENST00000542274 DIAPH3Q9NSV4 1193 aa12.98□□□□□ -0.33
CDH3-203ENST00000542274 CCP110O43303 1012 aa12.97□□□□□ -0.33
CDH3-203ENST00000542274 NOM1Q5C9Z4 860 aaKnown RBP12.97□□□□□ -0.33
CDH3-203ENST00000542274 ARMC3Q5W041 872 aa12.97□□□□□ -0.33
CDH3-203ENST00000542274 ZNF496Q96IT1 587 aaPredicted RBP12.97□□□□□ -0.33
CDH3-203ENST00000542274 CEP89Q96ST8 783 aa12.97□□□□□ -0.33
CDH3-203ENST00000542274 IBTKQ9P2D0 1353 aaPredicted RBP12.97□□□□□ -0.33
CDH3-203ENST00000542274 PPFIA2O75334 1257 aa12.97□□□□□ -0.33
CDH3-203ENST00000542274 HSCBQ8IWL3 235 aa12.97□□□□□ -0.33
CDH3-203ENST00000542274 ARPC5LQ9BPX5 153 aa12.97□□□□□ -0.33
CDH3-203ENST00000542274 OATP04181 439 aa12.97□□□□□ -0.33
CDH3-203ENST00000542274 NUTM1Q86Y26 1132 aa12.97□□□□□ -0.33
CDH3-203ENST00000542274 UNC5CLQ8IV45 518 aa12.97□□□□□ -0.33
CDH3-203ENST00000542274 LRRCC1Q9C099 1032 aa12.97□□□□□ -0.33
CDH3-203ENST00000542274 MAP3K2Q9Y2U5 619 aa12.97□□□□□ -0.33
CDH3-203ENST00000542274 RRP15Q9Y3B9 282 aaKnown RBP12.97□□□□□ -0.33
CDH3-203ENST00000542274 MAP4K4O95819 1239 aaPredicted RBP12.96□□□□□ -0.33
CDH3-203ENST00000542274 MYL6BP14649 208 aa12.96□□□□□ -0.33
CDH3-203ENST00000542274 GPT2Q8TD30 523 aa12.96□□□□□ -0.33
CDH3-203ENST00000542274 EVI5LQ96CN4 794 aa12.96□□□□□ -0.33
CDH3-203ENST00000542274 TOGARAM1Q9Y4F4 1720 aa12.96□□□□□ -0.34
CDH3-203ENST00000542274 SRGAP3O43295 1099 aa12.96□□□□□ -0.34
CDH3-203ENST00000542274 WWC2Q6AWC2 1192 aa12.96□□□□□ -0.34
CDH3-203ENST00000542274 NFXL1Q6ZNB6 911 aa12.96□□□□□ -0.34
CDH3-203ENST00000542274 PIAS4Q8N2W9 510 aaPredicted RBP12.96□□□□□ -0.34
CDH3-203ENST00000542274 TXLNBQ8N3L3 684 aa12.96□□□□□ -0.34
CDH3-203ENST00000542274 MRC1P22897 1456 aa12.95□□□□□ -0.34
CDH3-203ENST00000542274 SOS1Q07889 1333 aaPredicted RBP12.95□□□□□ -0.34
CDH3-203ENST00000542274 SURF6O75683 361 aaKnown RBP12.95□□□□□ -0.34
CDH3-203ENST00000542274 TTC5Q8N0Z6 440 aa12.95□□□□□ -0.34
CDH3-203ENST00000542274 HEG1Q9ULI3 1381 aa12.95□□□□□ -0.34
CDH3-203ENST00000542274 SALL3Q9BXA9 1300 aa12.95□□□□□ -0.34
CDH3-203ENST00000542274 MYBL2P10244 700 aa12.95□□□□□ -0.34
CDH3-203ENST00000542274 NEFHP12036 1026 aa12.95□□□□□ -0.34
CDH3-203ENST00000542274 RBSNQ9H1K0 784 aa12.95□□□□□ -0.34
CDH3-203ENST00000542274 DBF4Q9UBU7 674 aaPredicted RBP12.95□□□□□ -0.34
CDH3-203ENST00000542274 PLEKHG2Q9H7P9 1386 aa12.94□□□□□ -0.34
CDH3-203ENST00000542274 NEXNQ0ZGT2 675 aa12.94□□□□□ -0.34
CDH3-203ENST00000542274 RBM26Q5T8P6 1007 aaKnown RBP12.94□□□□□ -0.34
CDH3-203ENST00000542274 CCDC181Q5TID7 509 aa12.94□□□□□ -0.34
CDH3-203ENST00000542274 PICK1Q9NRD5 415 aa12.94□□□□□ -0.34
CDH3-203ENST00000542274 FAM53CQ9NYF3 392 aa12.94□□□□□ -0.34
CDH3-203ENST00000542274 CWC15Q9P013 229 aaKnown RBP12.94□□□□□ -0.34
CDH3-203ENST00000542274 PCDHGA4Q9Y5G9 962 aa12.94□□□□□ -0.34
CDH3-203ENST00000542274 HOXB7P09629 217 aa12.94□□□□□ -0.34
CDH3-203ENST00000542274 MAGEA8P43361 318 aa12.94□□□□□ -0.34
CDH3-203ENST00000542274 MAGEA9P43362 315 aa12.94□□□□□ -0.34
CDH3-203ENST00000542274 PDIA6Q15084 440 aa12.94□□□□□ -0.34
CDH3-203ENST00000542274 CCDC26Q8TAB7 109 aa12.94□□□□□ -0.34
CDH3-203ENST00000542274 RILPL2Q969X0 211 aa12.94□□□□□ -0.34
CDH3-203ENST00000542274 USP26Q9BXU7 913 aa12.94□□□□□ -0.34
CDH3-203ENST00000542274 PA2G4Q9UQ80 394 aaKnown RBP12.94□□□□□ -0.34
CDH3-203ENST00000542274 USP16Q9Y5T5 823 aa12.94□□□□□ -0.34
CDH3-203ENST00000542274 NRAPQ86VF7 1730 aa12.93□□□□□ -0.34
CDH3-203ENST00000542274 MX1P20591 662 aa12.93□□□□□ -0.34
CDH3-203ENST00000542274 TRAF1Q13077 416 aa12.93□□□□□ -0.34
CDH3-203ENST00000542274 MIEF2Q96C03 454 aa12.93□□□□□ -0.34
CDH3-203ENST00000542274 CHCHD3Q9NX63 227 aaKnown RBP12.93□□□□□ -0.34
CDH3-203ENST00000542274 PTCD1O75127 700 aaKnown RBP12.93□□□□□ -0.34
CDH3-203ENST00000542274 SSH3Q8TE77 659 aa12.93□□□□□ -0.34
CDH3-203ENST00000542274 IL25Q9H293 177 aa12.93□□□□□ -0.34
CDH3-203ENST00000542274 SYCP1Q15431 976 aa12.92□□□□□ -0.34
CDH3-203ENST00000542274 TBC1D25Q3MII6 688 aa12.92□□□□□ -0.34
CDH3-203ENST00000542274 C17orf53Q8N3J3 647 aaPredicted RBP12.92□□□□□ -0.34
CDH3-203ENST00000542274 DISP2A7MBM2 1401 aa12.92□□□□□ -0.34
CDH3-203ENST00000542274 A0A0G2JS52 829 aa12.92□□□□□ -0.34
CDH3-203ENST00000542274 SMC2O95347 1197 aa12.92□□□□□ -0.34
CDH3-203ENST00000542274 SETSIPP0DME0 302 aa12.92□□□□□ -0.34
CDH3-203ENST00000542274 TBC1D8BQ0IIM8 1120 aa12.92□□□□□ -0.34
CDH3-203ENST00000542274 MMS22LQ6ZRQ5 1243 aa12.92□□□□□ -0.34
CDH3-203ENST00000542274 C8orf37Q96NL8 207 aa12.92□□□□□ -0.34
CDH3-203ENST00000542274 GBP4Q96PP9 640 aa12.92□□□□□ -0.34
CDH3-203ENST00000542274 TSPYL2Q9H2G4 693 aaPredicted RBP12.92□□□□□ -0.34
CDH3-203ENST00000542274 STK24Q9Y6E0 443 aa12.92□□□□□ -0.34
CDH3-203ENST00000542274 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.92□□□□□ -0.34
CDH3-203ENST00000542274 WNK3Q9BYP7 1800 aa12.92□□□□□ -0.34
CDH3-203ENST00000542274 PXDNLA1KZ92 1463 aa12.92□□□□□ -0.34
CDH3-203ENST00000542274 GLI3P10071 1580 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms