RNA–Protein interactions for RNA: ENST00000542242.1

DDX11-219, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 795 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-219ENST00000542242 ZNF609O15014 1411 aa17.78■□□□□ 0.44
DDX11-219ENST00000542242 RBM25P49756 843 aaKnown RBP17.77■□□□□ 0.44
DDX11-219ENST00000542242 SLC51AQ86UW1 340 aa17.77■□□□□ 0.44
DDX11-219ENST00000542242 ZNF526Q8TF50 670 aaPredicted RBP17.77■□□□□ 0.44
DDX11-219ENST00000542242 NLRP3Q96P20 1036 aa17.77■□□□□ 0.44
DDX11-219ENST00000542242 DBNLQ9UJU6 430 aaKnown RBP17.77■□□□□ 0.44
DDX11-219ENST00000542242 REC8O95072 547 aa17.76■□□□□ 0.43
DDX11-219ENST00000542242 DBNDD2Q9BQY9 259 aa17.76■□□□□ 0.43
DDX11-219ENST00000542242 ESYT1Q9BSJ8 1104 aa17.76■□□□□ 0.43
DDX11-219ENST00000542242 SPEF2Q9C093 1822 aa17.76■□□□□ 0.43
DDX11-219ENST00000542242 DUOX1Q9NRD9 1551 aa17.75■□□□□ 0.43
DDX11-219ENST00000542242 C21orf2O43822 256 aa17.75■□□□□ 0.43
DDX11-219ENST00000542242 CCDC152Q4G0S7 254 aa17.75■□□□□ 0.43
DDX11-219ENST00000542242 EVI5LQ96CN4 794 aa17.75■□□□□ 0.43
DDX11-219ENST00000542242 NEUROD6Q96NK8 337 aa17.75■□□□□ 0.43
DDX11-219ENST00000542242 AKAP2Q9Y2D5 859 aa17.75■□□□□ 0.43
DDX11-219ENST00000542242 A0A1B0GUL6 1792 aa17.75■□□□□ 0.43
DDX11-219ENST00000542242 LTBP3Q9NS15 1303 aa17.74■□□□□ 0.43
DDX11-219ENST00000542242 ATP5JP18859 108 aa17.74■□□□□ 0.43
DDX11-219ENST00000542242 ALDH1B1P30837 517 aa17.74■□□□□ 0.43
DDX11-219ENST00000542242 OLFM4Q6UX06 510 aa17.74■□□□□ 0.43
DDX11-219ENST00000542242 LDHAL6AQ6ZMR3 332 aa17.74■□□□□ 0.43
DDX11-219ENST00000542242 BOLA2Q9H3K6 86 aa17.74■□□□□ 0.43
DDX11-219ENST00000542242 CNNM1Q9NRU3 951 aa17.74■□□□□ 0.43
DDX11-219ENST00000542242 DAXXQ9UER7 740 aaPredicted RBP17.74■□□□□ 0.43
DDX11-219ENST00000542242 RTL9Q8NET4 1388 aa17.74■□□□□ 0.43
DDX11-219ENST00000542242 METTL24Q5JXM2 366 aa17.73■□□□□ 0.43
DDX11-219ENST00000542242 ARHGAP27Q6ZUM4 889 aa17.73■□□□□ 0.43
DDX11-219ENST00000542242 USP26Q9BXU7 913 aa17.73■□□□□ 0.43
DDX11-219ENST00000542242 RIPOR2Q9Y4F9 1068 aa17.73■□□□□ 0.43
DDX11-219ENST00000542242 COL4A5P29400 1685 aa17.72■□□□□ 0.43
DDX11-219ENST00000542242 A0A1B0GUL7 405 aa17.72■□□□□ 0.43
DDX11-219ENST00000542242 RASSF7Q02833 373 aa17.72■□□□□ 0.43
DDX11-219ENST00000542242 BECN1Q14457 450 aa17.72■□□□□ 0.43
DDX11-219ENST00000542242 RBM17Q96I25 401 aaKnown RBP17.72■□□□□ 0.43
DDX11-219ENST00000542242 RTN4Q9NQC3 1192 aaKnown RBP17.72■□□□□ 0.43
DDX11-219ENST00000542242 TIMM10P62072 90 aa17.71■□□□□ 0.43
DDX11-219ENST00000542242 ERICH6Q7L0X2 663 aa17.71■□□□□ 0.43
DDX11-219ENST00000542242 RPGRQ92834 1020 aaKnown RBP17.71■□□□□ 0.43
DDX11-219ENST00000542242 DIAPH3Q9NSV4 1193 aa17.71■□□□□ 0.43
DDX11-219ENST00000542242 HIP1O00291 1037 aa17.7■□□□□ 0.42
DDX11-219ENST00000542242 GRAPQ13588 217 aa17.7■□□□□ 0.42
DDX11-219ENST00000542242 GRAPLQ8TC17 118 aaPredicted RBP17.7■□□□□ 0.42
DDX11-219ENST00000542242 RUFY2Q8WXA3 655 aa17.7■□□□□ 0.42
DDX11-219ENST00000542242 SEC31BQ9NQW1 1179 aa17.7■□□□□ 0.42
DDX11-219ENST00000542242 IGHMBP2P38935 993 aaKnown RBP17.69■□□□□ 0.42
DDX11-219ENST00000542242 ATP2B3Q16720 1220 aa17.69■□□□□ 0.42
DDX11-219ENST00000542242 CCDC93Q567U6 631 aa17.69■□□□□ 0.42
DDX11-219ENST00000542242 GORABQ5T7V8 394 aa17.69■□□□□ 0.42
DDX11-219ENST00000542242 SOGA3Q5TF21 947 aa17.69■□□□□ 0.42
DDX11-219ENST00000542242 CELF1Q92879 486 aaKnown RBP17.69■□□□□ 0.42
DDX11-219ENST00000542242 MPHOSPH8Q99549 860 aa17.69■□□□□ 0.42
DDX11-219ENST00000542242 HAUS7Q99871 368 aa17.69■□□□□ 0.42
DDX11-219ENST00000542242 FSD1Q9BTV5 496 aa17.69■□□□□ 0.42
DDX11-219ENST00000542242 ATP6V0A2Q9Y487 856 aa17.69■□□□□ 0.42
DDX11-219ENST00000542242 MROH5Q6ZUA9 1318 aa17.69■□□□□ 0.42
DDX11-219ENST00000542242 PPEF1O14829 653 aaPredicted RBP17.68■□□□□ 0.42
DDX11-219ENST00000542242 BBOX1O75936 387 aa17.68■□□□□ 0.42
DDX11-219ENST00000542242 ARAP2Q8WZ64 1704 aa17.68■□□□□ 0.42
DDX11-219ENST00000542242 XAGE2Q96GT9 111 aa17.68■□□□□ 0.42
DDX11-219ENST00000542242 CDC5LQ99459 802 aaKnown RBP17.68■□□□□ 0.42
DDX11-219ENST00000542242 DNAJC2Q99543 621 aaKnown RBP17.68■□□□□ 0.42
DDX11-219ENST00000542242 SGSM2O43147 1006 aa17.67■□□□□ 0.42
DDX11-219ENST00000542242 TOMM70O94826 608 aa17.67■□□□□ 0.42
DDX11-219ENST00000542242 LMNB1P20700 586 aa17.67■□□□□ 0.42
DDX11-219ENST00000542242 ADORA1P30542 326 aa17.67■□□□□ 0.42
DDX11-219ENST00000542242 FKBP4Q02790 459 aaKnown RBP eCLIP17.67■□□□□ 0.42
DDX11-219ENST00000542242 CCDC158Q5M9N0 1113 aa17.67■□□□□ 0.42
DDX11-219ENST00000542242 C9orf131Q5VYM1 1079 aa17.67■□□□□ 0.42
DDX11-219ENST00000542242 CC2D2BQ6DHV5 1058 aa17.67■□□□□ 0.42
DDX11-219ENST00000542242 DDX46Q7L014 1031 aaKnown RBP17.67■□□□□ 0.42
DDX11-219ENST00000542242 SP8Q8IXZ3 490 aa17.67■□□□□ 0.42
DDX11-219ENST00000542242 VGLL2Q8N8G2 317 aa17.67■□□□□ 0.42
DDX11-219ENST00000542242 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.67■□□□□ 0.42
DDX11-219ENST00000542242 PSMD1Q99460 953 aa17.67■□□□□ 0.42
DDX11-219ENST00000542242 ANO2Q9NQ90 1003 aa17.67■□□□□ 0.42
DDX11-219ENST00000542242 ZNF219Q9P2Y4 722 aaPredicted RBP17.67■□□□□ 0.42
DDX11-219ENST00000542242 EPB41L2O43491 1005 aaKnown RBP17.66■□□□□ 0.42
DDX11-219ENST00000542242 PDE8BO95263 885 aa17.66■□□□□ 0.42
DDX11-219ENST00000542242 IFIT1P09914 478 aaKnown RBP17.66■□□□□ 0.42
DDX11-219ENST00000542242 MCCP23508 829 aa17.66■□□□□ 0.42
DDX11-219ENST00000542242 SLC4A3P48751 1232 aa17.66■□□□□ 0.42
DDX11-219ENST00000542242 TTC39AQ5SRH9 613 aa17.66■□□□□ 0.42
DDX11-219ENST00000542242 CWC27Q6UX04 472 aaKnown RBP17.66■□□□□ 0.42
DDX11-219ENST00000542242 RTKN2Q8IZC4 609 aa17.66■□□□□ 0.42
DDX11-219ENST00000542242 KIF2CQ99661 725 aa17.66■□□□□ 0.42
DDX11-219ENST00000542242 RTFDC1Q9BY42 306 aaPredicted RBP17.66■□□□□ 0.42
DDX11-219ENST00000542242 TAOK3Q9H2K8 898 aa17.66■□□□□ 0.42
DDX11-219ENST00000542242 ZC3H4Q9UPT8 1303 aaKnown RBP17.66■□□□□ 0.42
DDX11-219ENST00000542242 RFX7Q2KHR2 1363 aa17.66■□□□□ 0.42
DDX11-219ENST00000542242 ANKRD18AQ8IVF6 992 aa17.65■□□□□ 0.42
DDX11-219ENST00000542242 EDC3Q96F86 508 aaKnown RBP17.65■□□□□ 0.42
DDX11-219ENST00000542242 ZNF646O15015 1829 aaPredicted RBP17.65■□□□□ 0.42
DDX11-219ENST00000542242 NMIQ13287 307 aaPredicted RBP17.64■□□□□ 0.41
DDX11-219ENST00000542242 PUM3Q15397 648 aaKnown RBP17.64■□□□□ 0.41
DDX11-219ENST00000542242 GRIPAP1Q4V328 841 aa17.64■□□□□ 0.41
DDX11-219ENST00000542242 KIAA1211Q6ZU35 1233 aa17.64■□□□□ 0.41
DDX11-219ENST00000542242 TMC4Q7Z404 712 aa17.64■□□□□ 0.41
DDX11-219ENST00000542242 IL25Q9H293 177 aa17.64■□□□□ 0.41
DDX11-219ENST00000542242 RNF181Q9P0P0 153 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms