RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 ZNF75DP51815 510 aa10.78□□□□□ -0.68
THBS3-211ENST00000541990 MAP3K11Q16584 847 aa10.78□□□□□ -0.68
THBS3-211ENST00000541990 FEZ1Q99689 392 aa10.78□□□□□ -0.68
THBS3-211ENST00000541990 TRIM5Q9C035 493 aa10.78□□□□□ -0.68
THBS3-211ENST00000541990 COL22A1Q8NFW1 1626 aaPredicted RBP10.78□□□□□ -0.68
THBS3-211ENST00000541990 DNAJC25Q9H1X3 360 aa10.78□□□□□ -0.68
THBS3-211ENST00000541990 MAPK8IP2Q13387 824 aaPredicted RBP10.77□□□□□ -0.69
THBS3-211ENST00000541990 KMT5BQ4FZB7 885 aa10.77□□□□□ -0.69
THBS3-211ENST00000541990 LRRC24Q50LG9 513 aa10.77□□□□□ -0.69
THBS3-211ENST00000541990 KIF18AQ8NI77 898 aa10.77□□□□□ -0.69
THBS3-211ENST00000541990 TAF6LQ9Y6J9 622 aa10.77□□□□□ -0.69
THBS3-211ENST00000541990 ALDH1L1O75891 902 aa10.77□□□□□ -0.69
THBS3-211ENST00000541990 SASH1O94885 1247 aa10.77□□□□□ -0.69
THBS3-211ENST00000541990 KIF6Q6ZMV9 814 aa10.77□□□□□ -0.69
THBS3-211ENST00000541990 PLA2G4DQ86XP0 818 aa10.77□□□□□ -0.69
THBS3-211ENST00000541990 LRRC4BQ9NT99 713 aa10.77□□□□□ -0.69
THBS3-211ENST00000541990 PDRG1Q9NUG6 133 aa10.77□□□□□ -0.69
THBS3-211ENST00000541990 CWC25Q9NXE8 425 aaPredicted RBP10.77□□□□□ -0.69
THBS3-211ENST00000541990 TRPC5Q9UL62 973 aaPredicted RBP10.77□□□□□ -0.69
THBS3-211ENST00000541990 TPCN1Q9ULQ1 816 aa10.77□□□□□ -0.69
THBS3-211ENST00000541990 ABCC6O95255 1503 aa10.77□□□□□ -0.69
THBS3-211ENST00000541990 GLI3P10071 1580 aa10.76□□□□□ -0.69
THBS3-211ENST00000541990 TPD52L1Q16890 204 aaPredicted RBP10.76□□□□□ -0.69
THBS3-211ENST00000541990 SLFNL1Q499Z3 407 aa10.76□□□□□ -0.69
THBS3-211ENST00000541990 ZNF215Q9UL58 517 aaPredicted RBP10.76□□□□□ -0.69
THBS3-211ENST00000541990 ATP6V1DQ9Y5K8 247 aa10.76□□□□□ -0.69
THBS3-211ENST00000541990 ADAMTS7Q9UKP4 1686 aa10.76□□□□□ -0.69
THBS3-211ENST00000541990 UBN2Q6ZU65 1347 aa10.76□□□□□ -0.69
THBS3-211ENST00000541990 WTIPA6NIX2 430 aaPredicted RBP10.76□□□□□ -0.69
THBS3-211ENST00000541990 SOCS7O14512 581 aa10.76□□□□□ -0.69
THBS3-211ENST00000541990 NPHP1O15259 732 aa10.76□□□□□ -0.69
THBS3-211ENST00000541990 TPM3P06753 285 aa10.76□□□□□ -0.69
THBS3-211ENST00000541990 TCIRG1Q13488 830 aa10.76□□□□□ -0.69
THBS3-211ENST00000541990 POLA2Q14181 598 aa10.76□□□□□ -0.69
THBS3-211ENST00000541990 CCDC112Q8NEF3 446 aa10.76□□□□□ -0.69
THBS3-211ENST00000541990 CDCA7Q9BWT1 371 aaPredicted RBP10.76□□□□□ -0.69
THBS3-211ENST00000541990 ERICH4A6NGS2 130 aa10.75□□□□□ -0.69
THBS3-211ENST00000541990 GNPATO15228 680 aa10.75□□□□□ -0.69
THBS3-211ENST00000541990 NR1I2O75469 434 aa10.75□□□□□ -0.69
THBS3-211ENST00000541990 AACSQ86V21 672 aa10.75□□□□□ -0.69
THBS3-211ENST00000541990 HELBQ8NG08 1087 aaPredicted RBP10.75□□□□□ -0.69
THBS3-211ENST00000541990 EAF2Q96CJ1 260 aaPredicted RBP10.75□□□□□ -0.69
THBS3-211ENST00000541990 TNMDQ9H2S6 317 aa10.75□□□□□ -0.69
THBS3-211ENST00000541990 CCDC87Q9NVE4 849 aa10.75□□□□□ -0.69
THBS3-211ENST00000541990 TRMT112Q9UI30 125 aaKnown RBP10.75□□□□□ -0.69
THBS3-211ENST00000541990 CCNL1Q9UK58 526 aaPredicted RBP10.75□□□□□ -0.69
THBS3-211ENST00000541990 CASP7P55210 303 aa10.75□□□□□ -0.69
THBS3-211ENST00000541990 TIMM10P62072 90 aa10.75□□□□□ -0.69
THBS3-211ENST00000541990 FOXO4P98177 505 aa10.75□□□□□ -0.69
THBS3-211ENST00000541990 TFCP2Q12800 502 aa10.75□□□□□ -0.69
THBS3-211ENST00000541990 CLIP2Q9UDT6 1046 aa10.75□□□□□ -0.69
THBS3-211ENST00000541990 ELF2Q15723 593 aa10.74□□□□□ -0.69
THBS3-211ENST00000541990 SUSD4Q5VX71 490 aa10.74□□□□□ -0.69
THBS3-211ENST00000541990 LARP1BQ659C4 914 aaKnown RBP10.74□□□□□ -0.69
THBS3-211ENST00000541990 FBXO38Q6PIJ6 1188 aa10.74□□□□□ -0.69
THBS3-211ENST00000541990 TRMT1Q9NXH9 659 aaKnown RBP10.74□□□□□ -0.69
THBS3-211ENST00000541990 RGS17Q9UGC6 210 aaPredicted RBP10.74□□□□□ -0.69
THBS3-211ENST00000541990 MORC2Q9Y6X9 1032 aaPredicted RBP10.74□□□□□ -0.69
THBS3-211ENST00000541990 ITGB4P16144 1822 aa10.74□□□□□ -0.69
THBS3-211ENST00000541990 PTPN12Q05209 780 aaKnown RBP10.74□□□□□ -0.69
THBS3-211ENST00000541990 TERF2Q15554 542 aa10.74□□□□□ -0.69
THBS3-211ENST00000541990 CEP135Q66GS9 1140 aa10.74□□□□□ -0.69
THBS3-211ENST00000541990 LRRN4CLQ8ND94 238 aa10.74□□□□□ -0.69
THBS3-211ENST00000541990 PGBD1Q96JS3 809 aa10.74□□□□□ -0.69
THBS3-211ENST00000541990 NRAPQ86VF7 1730 aa10.74□□□□□ -0.69
THBS3-211ENST00000541990 AOX1Q06278 1338 aa10.74□□□□□ -0.69
THBS3-211ENST00000541990 MAP3K15Q6ZN16 1313 aa10.74□□□□□ -0.69
THBS3-211ENST00000541990 KRT85P78386 507 aa10.74□□□□□ -0.69
THBS3-211ENST00000541990 NLRP10Q86W26 655 aa10.74□□□□□ -0.69
THBS3-211ENST00000541990 CNTROBQ8N137 903 aa10.74□□□□□ -0.69
THBS3-211ENST00000541990 BOLA2Q9H3K6 86 aa10.74□□□□□ -0.69
THBS3-211ENST00000541990 NIP7Q9Y221 180 aaKnown RBP eCLIP10.74□□□□□ -0.69
THBS3-211ENST00000541990 DOT1LQ8TEK3 1739 aa10.73□□□□□ -0.69
THBS3-211ENST00000541990 ZNF165P49910 485 aa10.73□□□□□ -0.69
THBS3-211ENST00000541990 EIF5P55010 431 aaKnown RBP10.73□□□□□ -0.69
THBS3-211ENST00000541990 RBM6P78332 1123 aaKnown RBP10.73□□□□□ -0.69
THBS3-211ENST00000541990 GABPB1Q06547 395 aaPredicted RBP10.73□□□□□ -0.69
THBS3-211ENST00000541990 STK3Q13188 491 aa10.73□□□□□ -0.69
THBS3-211ENST00000541990 G3BP1Q13283 466 aaKnown RBP eCLIP10.73□□□□□ -0.69
THBS3-211ENST00000541990 USPL1Q5W0Q7 1092 aa10.73□□□□□ -0.69
THBS3-211ENST00000541990 GIGYF2Q6Y7W6 1299 aaKnown RBP10.73□□□□□ -0.69
THBS3-211ENST00000541990 C11orf57Q6ZUT1 292 aaPredicted RBP10.73□□□□□ -0.69
THBS3-211ENST00000541990 C3orf67Q6ZVT6 689 aa10.73□□□□□ -0.69
THBS3-211ENST00000541990 TDRD7Q8NHU6 1098 aaKnown RBP10.73□□□□□ -0.69
THBS3-211ENST00000541990 NEUROD6Q96NK8 337 aa10.73□□□□□ -0.69
THBS3-211ENST00000541990 SEC31BQ9NQW1 1179 aa10.73□□□□□ -0.69
THBS3-211ENST00000541990 H7C1W4 665 aa10.73□□□□□ -0.69
THBS3-211ENST00000541990 KCNJ4P48050 445 aa10.73□□□□□ -0.69
THBS3-211ENST00000541990 VPS53Q5VIR6 699 aa10.73□□□□□ -0.69
THBS3-211ENST00000541990 DDX11Q96FC9 970 aa10.73□□□□□ -0.69
THBS3-211ENST00000541990 GREM2Q9H772 168 aa10.73□□□□□ -0.69
THBS3-211ENST00000541990 ZSWIM6Q9HCJ5 1215 aa10.73□□□□□ -0.69
THBS3-211ENST00000541990 RAB11FIP3O75154 756 aa10.72□□□□□ -0.69
THBS3-211ENST00000541990 IRX5P78411 483 aaPredicted RBP10.72□□□□□ -0.69
THBS3-211ENST00000541990 POTEAQ6S8J7 498 aa10.72□□□□□ -0.69
THBS3-211ENST00000541990 FAM196AQ6ZSG2 479 aa10.72□□□□□ -0.69
THBS3-211ENST00000541990 KRT27Q7Z3Y8 459 aa10.72□□□□□ -0.69
THBS3-211ENST00000541990 LEO1Q8WVC0 666 aaPredicted RBP10.72□□□□□ -0.69
THBS3-211ENST00000541990 ERCC4Q92889 916 aaPredicted RBP10.72□□□□□ -0.69
THBS3-211ENST00000541990 FAM227BQ96M60 508 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms