RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 NEFLP07196 543 aa7.81□□□□□ -1.16
CPSF7-220ENST00000541963 KCNA6P17658 529 aa7.81□□□□□ -1.16
CPSF7-220ENST00000541963 FGD1P98174 961 aa7.81□□□□□ -1.16
CPSF7-220ENST00000541963 EHHADHQ08426 723 aa7.81□□□□□ -1.16
CPSF7-220ENST00000541963 COL19A1Q14993 1142 aa7.81□□□□□ -1.16
CPSF7-220ENST00000541963 IER5Q5VY09 327 aa7.81□□□□□ -1.16
CPSF7-220ENST00000541963 LRRC69Q6ZNQ3 347 aa7.81□□□□□ -1.16
CPSF7-220ENST00000541963 ATCAYQ86WG3 371 aa7.81□□□□□ -1.16
CPSF7-220ENST00000541963 GPR152Q8TDT2 470 aa7.81□□□□□ -1.16
CPSF7-220ENST00000541963 SLC26A8Q96RN1 970 aa7.81□□□□□ -1.16
CPSF7-220ENST00000541963 ZIC5Q96T25 663 aa7.81□□□□□ -1.16
CPSF7-220ENST00000541963 SENP2Q9HC62 589 aa7.81□□□□□ -1.16
CPSF7-220ENST00000541963 ATP13A2Q9NQ11 1180 aa7.81□□□□□ -1.16
CPSF7-220ENST00000541963 POLIQ9UNA4 740 aa7.81□□□□□ -1.16
CPSF7-220ENST00000541963 A0A1W2PNR3 127 aa7.8□□□□□ -1.16
CPSF7-220ENST00000541963 RBM47A0AV96 593 aaKnown RBP7.8□□□□□ -1.16
CPSF7-220ENST00000541963 EPB42P16452 691 aa7.8□□□□□ -1.16
CPSF7-220ENST00000541963 EAPPQ56P03 285 aaPredicted RBP7.8□□□□□ -1.16
CPSF7-220ENST00000541963 EFHC2Q5JST6 749 aa7.8□□□□□ -1.16
CPSF7-220ENST00000541963 TMC7Q7Z402 723 aa7.8□□□□□ -1.16
CPSF7-220ENST00000541963 KIFC2Q96AC6 838 aa7.8□□□□□ -1.16
CPSF7-220ENST00000541963 GPAMQ9HCL2 828 aa7.8□□□□□ -1.16
CPSF7-220ENST00000541963 FNDC3AQ9Y2H6 1198 aaKnown RBP7.8□□□□□ -1.16
CPSF7-220ENST00000541963 TBX22Q9Y458 520 aa7.8□□□□□ -1.16
CPSF7-220ENST00000541963 TMEM131LA2VDJ0 1609 aa7.8□□□□□ -1.16
CPSF7-220ENST00000541963 PLEKHG1Q9ULL1 1385 aa7.8□□□□□ -1.16
CPSF7-220ENST00000541963 SPHKAPQ2M3C7 1700 aa7.8□□□□□ -1.16
CPSF7-220ENST00000541963 ATP4AP20648 1035 aa7.79□□□□□ -1.16
CPSF7-220ENST00000541963 IDH3AP50213 366 aa7.79□□□□□ -1.16
CPSF7-220ENST00000541963 ARSDP51689 593 aa7.79□□□□□ -1.16
CPSF7-220ENST00000541963 C8orf34Q49A92 452 aa7.79□□□□□ -1.16
CPSF7-220ENST00000541963 NPAS4Q8IUM7 802 aa7.79□□□□□ -1.16
CPSF7-220ENST00000541963 IRX2Q9BZI1 471 aaPredicted RBP7.79□□□□□ -1.16
CPSF7-220ENST00000541963 DNMT3LQ9UJW3 386 aa7.79□□□□□ -1.16
CPSF7-220ENST00000541963 RPGRIP1LQ68CZ1 1315 aa7.78□□□□□ -1.16
CPSF7-220ENST00000541963 PDGFAP04085 211 aa7.78□□□□□ -1.16
CPSF7-220ENST00000541963 RIPOR1Q6ZS17 1223 aa7.78□□□□□ -1.16
CPSF7-220ENST00000541963 BTLAQ7Z6A9 289 aa7.78□□□□□ -1.16
CPSF7-220ENST00000541963 NLRP8Q86W28 1048 aa7.78□□□□□ -1.16
CPSF7-220ENST00000541963 ZNF280CQ8ND82 737 aa7.78□□□□□ -1.16
CPSF7-220ENST00000541963 GIPC2Q8TF65 315 aa7.78□□□□□ -1.16
CPSF7-220ENST00000541963 C7orf43Q8WVR3 580 aa7.78□□□□□ -1.16
CPSF7-220ENST00000541963 HSH2DQ96JZ2 352 aa7.78□□□□□ -1.16
CPSF7-220ENST00000541963 CEP63Q96MT8 703 aa7.78□□□□□ -1.16
CPSF7-220ENST00000541963 RUBCNLQ9H714 662 aa7.78□□□□□ -1.16
CPSF7-220ENST00000541963 AAASQ9NRG9 546 aa7.78□□□□□ -1.16
CPSF7-220ENST00000541963 KIF1BO60333 1816 aa7.78□□□□□ -1.16
CPSF7-220ENST00000541963 MYO5BQ9ULV0 1848 aa7.78□□□□□ -1.16
CPSF7-220ENST00000541963 TRPM2O94759 1503 aa7.78□□□□□ -1.16
CPSF7-220ENST00000541963 ZFYVE9O95405 1425 aa7.78□□□□□ -1.16
CPSF7-220ENST00000541963 H7C1W4 665 aa7.77□□□□□ -1.17
CPSF7-220ENST00000541963 ST8SIA5O15466 376 aa7.77□□□□□ -1.17
CPSF7-220ENST00000541963 ATP2B2Q01814 1243 aa7.77□□□□□ -1.17
CPSF7-220ENST00000541963 LBRQ14739 615 aaKnown RBP7.77□□□□□ -1.17
CPSF7-220ENST00000541963 FIGNL1Q6PIW4 674 aa7.77□□□□□ -1.17
CPSF7-220ENST00000541963 CMTR1Q8N1G2 835 aaKnown RBP7.77□□□□□ -1.17
CPSF7-220ENST00000541963 NUDT16Q96DE0 195 aaKnown RBP7.77□□□□□ -1.17
CPSF7-220ENST00000541963 CRISPLD1Q9H336 500 aa7.77□□□□□ -1.17
CPSF7-220ENST00000541963 BCS1LQ9Y276 419 aa7.77□□□□□ -1.17
CPSF7-220ENST00000541963 PIK3R4Q99570 1358 aa7.76□□□□□ -1.17
CPSF7-220ENST00000541963 RAB3GAP2Q9H2M9 1393 aa7.76□□□□□ -1.17
CPSF7-220ENST00000541963 PIP4K2BP78356 416 aa7.76□□□□□ -1.17
CPSF7-220ENST00000541963 FAM26DQ5JW98 314 aa7.76□□□□□ -1.17
CPSF7-220ENST00000541963 NIF3L1Q9GZT8 377 aa7.76□□□□□ -1.17
CPSF7-220ENST00000541963 CCDC144AA2RUR9 1427 aa7.76□□□□□ -1.17
CPSF7-220ENST00000541963 LRRC7Q96NW7 1537 aa7.75□□□□□ -1.17
CPSF7-220ENST00000541963 OPLAHO14841 1288 aa7.75□□□□□ -1.17
CPSF7-220ENST00000541963 TREHO43280 583 aa7.75□□□□□ -1.17
CPSF7-220ENST00000541963 ZNF16P17020 682 aaPredicted RBP7.75□□□□□ -1.17
CPSF7-220ENST00000541963 MAPK8P45983 427 aa7.75□□□□□ -1.17
CPSF7-220ENST00000541963 GJD3Q8N144 294 aa7.75□□□□□ -1.17
CPSF7-220ENST00000541963 ZNF428Q96B54 188 aa7.75□□□□□ -1.17
CPSF7-220ENST00000541963 FAM129BQ96TA1 746 aa7.75□□□□□ -1.17
CPSF7-220ENST00000541963 RTCBQ9Y3I0 505 aaKnown RBP7.75□□□□□ -1.17
CPSF7-220ENST00000541963 CLTCL1P53675 1640 aa7.74□□□□□ -1.17
CPSF7-220ENST00000541963 INPP5BP32019 993 aa7.74□□□□□ -1.17
CPSF7-220ENST00000541963 RGL3Q3MIN7 710 aa7.74□□□□□ -1.17
CPSF7-220ENST00000541963 ALKBH8Q96BT7 664 aaKnown RBP7.74□□□□□ -1.17
CPSF7-220ENST00000541963 DMGDHQ9UI17 866 aaKnown RBP7.74□□□□□ -1.17
CPSF7-220ENST00000541963 DIP2AQ14689 1571 aa7.74□□□□□ -1.17
CPSF7-220ENST00000541963 TMEM94Q12767 1356 aa7.73□□□□□ -1.17
CPSF7-220ENST00000541963 NCOA3Q9Y6Q9 1424 aa7.73□□□□□ -1.17
CPSF7-220ENST00000541963 ATXN7O15265 892 aaPredicted RBP7.73□□□□□ -1.17
CPSF7-220ENST00000541963 PTSQ03393 145 aa7.73□□□□□ -1.17
CPSF7-220ENST00000541963 SAMD5Q5TGI4 173 aa7.73□□□□□ -1.17
CPSF7-220ENST00000541963 NUCKS1Q9H1E3 243 aaKnown RBP7.73□□□□□ -1.17
CPSF7-220ENST00000541963 BRD7Q9NPI1 651 aa7.73□□□□□ -1.17
CPSF7-220ENST00000541963 STRCP1A6NGW2 1772 aa7.73□□□□□ -1.17
CPSF7-220ENST00000541963 NKTRP30414 1462 aaKnown RBP7.73□□□□□ -1.17
CPSF7-220ENST00000541963 MSH6P52701 1360 aa7.72□□□□□ -1.17
CPSF7-220ENST00000541963 ADAMTS13Q76LX8 1427 aa7.72□□□□□ -1.17
CPSF7-220ENST00000541963 SOBPA7XYQ1 873 aa7.72□□□□□ -1.17
CPSF7-220ENST00000541963 P4HBP07237 508 aaKnown RBP7.72□□□□□ -1.17
CPSF7-220ENST00000541963 XPCQ01831 940 aaPredicted RBP7.72□□□□□ -1.17
CPSF7-220ENST00000541963 DSC3Q14574 896 aa7.72□□□□□ -1.17
CPSF7-220ENST00000541963 ZNF438Q7Z4V0 828 aa7.72□□□□□ -1.17
CPSF7-220ENST00000541963 GMCL1Q96IK5 515 aa7.72□□□□□ -1.17
CPSF7-220ENST00000541963 C11orf16Q9NQ32 467 aa7.72□□□□□ -1.17
CPSF7-220ENST00000541963 PCDHGC4Q9Y5F7 938 aa7.72□□□□□ -1.17
CPSF7-220ENST00000541963 CHD2O14647 1828 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms