RNA–Protein interactions for RNA: ENST00000541948.2

NECAP1-205, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-205ENST00000541948 CHRNDQ07001 517 aa9.77□□□□□ -0.85
NECAP1-205ENST00000541948 HELBQ8NG08 1087 aaPredicted RBP9.77□□□□□ -0.85
NECAP1-205ENST00000541948 AIDAQ96BJ3 306 aa9.77□□□□□ -0.85
NECAP1-205ENST00000541948 PUS3Q9BZE2 481 aaKnown RBP9.77□□□□□ -0.85
NECAP1-205ENST00000541948 ZC3H12CQ9C0D7 883 aaKnown RBP9.77□□□□□ -0.85
NECAP1-205ENST00000541948 PRDM10Q9NQV6 1147 aa9.77□□□□□ -0.85
NECAP1-205ENST00000541948 VEGFBP49765 207 aa9.76□□□□□ -0.85
NECAP1-205ENST00000541948 MAP2K1Q02750 393 aaPredicted RBP9.76□□□□□ -0.85
NECAP1-205ENST00000541948 TNIP1Q15025 636 aa9.76□□□□□ -0.85
NECAP1-205ENST00000541948 RABL6Q3YEC7 729 aaPredicted RBP9.76□□□□□ -0.85
NECAP1-205ENST00000541948 TBC1D10BQ4KMP7 808 aaPredicted RBP9.76□□□□□ -0.85
NECAP1-205ENST00000541948 DACT2Q5SW24 774 aa9.76□□□□□ -0.85
NECAP1-205ENST00000541948 DPF2Q92785 391 aa9.76□□□□□ -0.85
NECAP1-205ENST00000541948 EYA3Q99504 573 aa9.76□□□□□ -0.85
NECAP1-205ENST00000541948 SRCIN1Q9C0H9 1055 aa9.76□□□□□ -0.85
NECAP1-205ENST00000541948 USP44Q9H0E7 712 aa9.76□□□□□ -0.85
NECAP1-205ENST00000541948 RASSF10A6NK89 507 aa9.75□□□□□ -0.85
NECAP1-205ENST00000541948 HSPA1AP0DMV8 641 aaKnown RBP9.75□□□□□ -0.85
NECAP1-205ENST00000541948 HSPA1BP0DMV9 641 aaKnown RBP9.75□□□□□ -0.85
NECAP1-205ENST00000541948 ECE1P42892 770 aa9.75□□□□□ -0.85
NECAP1-205ENST00000541948 RBM26Q5T8P6 1007 aaKnown RBP9.75□□□□□ -0.85
NECAP1-205ENST00000541948 RSBN1LQ6PCB5 846 aaPredicted RBP9.75□□□□□ -0.85
NECAP1-205ENST00000541948 TNS4Q8IZW8 715 aa9.75□□□□□ -0.85
NECAP1-205ENST00000541948 ZC3H15Q8WU90 426 aaKnown RBP9.75□□□□□ -0.85
NECAP1-205ENST00000541948 BICC1Q9H694 974 aaKnown RBP9.75□□□□□ -0.85
NECAP1-205ENST00000541948 SCAF8Q9UPN6 1271 aaKnown RBP9.75□□□□□ -0.85
NECAP1-205ENST00000541948 ZNF804BA4D1E1 1349 aa9.75□□□□□ -0.85
NECAP1-205ENST00000541948 AOX1Q06278 1338 aa9.75□□□□□ -0.85
NECAP1-205ENST00000541948 ANKRD18BA2A2Z9 1011 aa9.74□□□□□ -0.85
NECAP1-205ENST00000541948 ADM5C9JUS6 153 aa9.74□□□□□ -0.85
NECAP1-205ENST00000541948 IGHMBP2P38935 993 aaKnown RBP9.74□□□□□ -0.85
NECAP1-205ENST00000541948 ZNF280AP59817 542 aaPredicted RBP9.74□□□□□ -0.85
NECAP1-205ENST00000541948 ALDH1L2Q3SY69 923 aa9.74□□□□□ -0.85
NECAP1-205ENST00000541948 DIEXFQ68CQ4 756 aaKnown RBP9.74□□□□□ -0.85
NECAP1-205ENST00000541948 CERS5Q8N5B7 392 aa9.74□□□□□ -0.85
NECAP1-205ENST00000541948 KLHDC4Q8TBB5 520 aa9.74□□□□□ -0.85
NECAP1-205ENST00000541948 PCDHAC2Q9Y5I4 1007 aa9.74□□□□□ -0.85
NECAP1-205ENST00000541948 PTPRCP08575 1304 aa9.74□□□□□ -0.85
NECAP1-205ENST00000541948 RPS12P25398 132 aaKnown RBP9.73□□□□□ -0.85
NECAP1-205ENST00000541948 RFX5P48382 616 aaPredicted RBP9.73□□□□□ -0.85
NECAP1-205ENST00000541948 CTCFP49711 727 aaPredicted RBP9.73□□□□□ -0.85
NECAP1-205ENST00000541948 RARSP54136 660 aaKnown RBP9.73□□□□□ -0.85
NECAP1-205ENST00000541948 IFIT5Q13325 482 aaKnown RBP9.73□□□□□ -0.85
NECAP1-205ENST00000541948 KIF4BQ2VIQ3 1234 aa9.73□□□□□ -0.85
NECAP1-205ENST00000541948 DEFB115Q30KQ5 88 aa9.73□□□□□ -0.85
NECAP1-205ENST00000541948 LRRC24Q50LG9 513 aa9.73□□□□□ -0.85
NECAP1-205ENST00000541948 COL13A1Q5TAT6 717 aaPredicted RBP9.73□□□□□ -0.85
NECAP1-205ENST00000541948 PODNQ7Z5L7 613 aa9.73□□□□□ -0.85
NECAP1-205ENST00000541948 USP48Q86UV5 1035 aa9.73□□□□□ -0.85
NECAP1-205ENST00000541948 HHIPL1Q96JK4 782 aa9.73□□□□□ -0.85
NECAP1-205ENST00000541948 CD209Q9NNX6 404 aa9.73□□□□□ -0.85
NECAP1-205ENST00000541948 SMC4Q9NTJ3 1288 aa9.73□□□□□ -0.85
NECAP1-205ENST00000541948 C9orf78Q9NZ63 289 aaPredicted RBP9.73□□□□□ -0.85
NECAP1-205ENST00000541948 NOB1Q9ULX3 412 aaKnown RBP9.73□□□□□ -0.85
NECAP1-205ENST00000541948 LEMD3Q9Y2U8 911 aa9.73□□□□□ -0.85
NECAP1-205ENST00000541948 CHMP3Q9Y3E7 222 aa9.73□□□□□ -0.85
NECAP1-205ENST00000541948 USP17L3A6NCW0 530 aa9.72□□□□□ -0.85
NECAP1-205ENST00000541948 USP17L4A6NCW7 530 aa9.72□□□□□ -0.85
NECAP1-205ENST00000541948 H7C1D1 291 aa9.72□□□□□ -0.85
NECAP1-205ENST00000541948 CA12O43570 354 aa9.72□□□□□ -0.85
NECAP1-205ENST00000541948 BRPF1P55201 1214 aaPredicted RBP9.72□□□□□ -0.85
NECAP1-205ENST00000541948 NBPF9Q3BBW0 867 aa9.72□□□□□ -0.85
NECAP1-205ENST00000541948 CYP4F22Q6NT55 531 aa9.72□□□□□ -0.85
NECAP1-205ENST00000541948 C15orf52Q6ZUT6 534 aaKnown RBP9.72□□□□□ -0.85
NECAP1-205ENST00000541948 USP17L1Q7RTZ2 530 aa9.72□□□□□ -0.85
NECAP1-205ENST00000541948 SAPCD2Q86UD0 394 aa9.72□□□□□ -0.85
NECAP1-205ENST00000541948 VGLL2Q8N8G2 317 aa9.72□□□□□ -0.85
NECAP1-205ENST00000541948 ZIC5Q96T25 663 aa9.72□□□□□ -0.85
NECAP1-205ENST00000541948 MPHOSPH8Q99549 860 aa9.72□□□□□ -0.85
NECAP1-205ENST00000541948 BEGAINQ9BUH8 593 aa9.72□□□□□ -0.85
NECAP1-205ENST00000541948 ANKRD2Q9GZV1 360 aa9.72□□□□□ -0.85
NECAP1-205ENST00000541948 COA1Q9GZY4 146 aa9.72□□□□□ -0.85
NECAP1-205ENST00000541948 JAG2Q9Y219 1238 aa9.72□□□□□ -0.85
NECAP1-205ENST00000541948 RIPOR2Q9Y4F9 1068 aa9.72□□□□□ -0.85
NECAP1-205ENST00000541948 TLL2Q9Y6L7 1015 aa9.72□□□□□ -0.85
NECAP1-205ENST00000541948 ARAP2Q8WZ64 1704 aa9.71□□□□□ -0.85
NECAP1-205ENST00000541948 FOXN1O15353 648 aa9.71□□□□□ -0.86
NECAP1-205ENST00000541948 BCAR3O75815 825 aa9.71□□□□□ -0.86
NECAP1-205ENST00000541948 CELF2O95319 508 aaKnown RBP9.71□□□□□ -0.86
NECAP1-205ENST00000541948 MMP14P50281 582 aa9.71□□□□□ -0.86
NECAP1-205ENST00000541948 GTF2IP78347 998 aa9.71□□□□□ -0.86
NECAP1-205ENST00000541948 SCARF1Q14162 830 aa9.71□□□□□ -0.86
NECAP1-205ENST00000541948 GRIK5Q16478 980 aa9.71□□□□□ -0.86
NECAP1-205ENST00000541948 ANGEL2Q5VTE6 544 aaKnown RBP9.71□□□□□ -0.86
NECAP1-205ENST00000541948 LDHAL6AQ6ZMR3 332 aa9.71□□□□□ -0.86
NECAP1-205ENST00000541948 ERICH6Q7L0X2 663 aa9.71□□□□□ -0.86
NECAP1-205ENST00000541948 CDC37L1Q7L3B6 337 aa9.71□□□□□ -0.86
NECAP1-205ENST00000541948 AGBL3Q8NEM8 1001 aa9.71□□□□□ -0.86
NECAP1-205ENST00000541948 ZBED3Q96IU2 234 aaPredicted RBP9.71□□□□□ -0.86
NECAP1-205ENST00000541948 MYOZ2Q9NPC6 264 aa9.71□□□□□ -0.86
NECAP1-205ENST00000541948 GGA3Q9NZ52 723 aa9.71□□□□□ -0.86
NECAP1-205ENST00000541948 WDR33Q9C0J8 1336 aaKnown RBP9.71□□□□□ -0.86
NECAP1-205ENST00000541948 ECM29Q5VYK3 1845 aa9.7□□□□□ -0.86
NECAP1-205ENST00000541948 PLIN1O60240 522 aa9.7□□□□□ -0.86
NECAP1-205ENST00000541948 AOC2O75106 756 aa9.7□□□□□ -0.86
NECAP1-205ENST00000541948 USP17L8P0C7I0 530 aa9.7□□□□□ -0.86
NECAP1-205ENST00000541948 IL1R1P14778 569 aa9.7□□□□□ -0.86
NECAP1-205ENST00000541948 MAP2K2P36507 400 aa9.7□□□□□ -0.86
NECAP1-205ENST00000541948 GYG1P46976 350 aa9.7□□□□□ -0.86
NECAP1-205ENST00000541948 CCDC57Q2TAC2 916 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms