RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 EPHA1P21709 976 aa9.06□□□□□ -0.96
CIT-211ENST00000541841 MZF1P28698 734 aaPredicted RBP9.06□□□□□ -0.96
CIT-211ENST00000541841 CDC27P30260 824 aa9.06□□□□□ -0.96
CIT-211ENST00000541841 PCSK2P16519 638 aa9.05□□□□□ -0.96
CIT-211ENST00000541841 AKTIPQ9H8T0 292 aa9.05□□□□□ -0.96
CIT-211ENST00000541841 CCDC87Q9NVE4 849 aa9.05□□□□□ -0.96
CIT-211ENST00000541841 SALL4Q9UJQ4 1053 aa9.05□□□□□ -0.96
CIT-211ENST00000541841 FOXD3Q9UJU5 478 aaPredicted RBP9.05□□□□□ -0.96
CIT-211ENST00000541841 F8W735 103 aaPredicted RBP9.04□□□□□ -0.96
CIT-211ENST00000541841 DDX3YO15523 660 aaKnown RBP9.04□□□□□ -0.96
CIT-211ENST00000541841 FZD6O60353 706 aa9.04□□□□□ -0.96
CIT-211ENST00000541841 H2AFB1P0C5Y9 115 aa9.04□□□□□ -0.96
CIT-211ENST00000541841 H2AFB2P0C5Z0 115 aa9.04□□□□□ -0.96
CIT-211ENST00000541841 TTC16Q8NEE8 873 aa9.04□□□□□ -0.96
CIT-211ENST00000541841 NFKBIEO00221 500 aa9.03□□□□□ -0.96
CIT-211ENST00000541841 EREGO14944 169 aa9.03□□□□□ -0.96
CIT-211ENST00000541841 XKR5Q6UX68 686 aa9.03□□□□□ -0.96
CIT-211ENST00000541841 MRPL18Q9H0U6 180 aaKnown RBP9.03□□□□□ -0.96
CIT-211ENST00000541841 SCO2A0A1W2PP80 73 aa9.02□□□□□ -0.97
CIT-211ENST00000541841 TM4SF5O14894 197 aa9.02□□□□□ -0.97
CIT-211ENST00000541841 NPR3P17342 541 aa9.02□□□□□ -0.97
CIT-211ENST00000541841 SERPINB4P48594 390 aa9.02□□□□□ -0.97
CIT-211ENST00000541841 DZANK1Q9NVP4 752 aa9.02□□□□□ -0.97
CIT-211ENST00000541841 FSCN2O14926 492 aa9.01□□□□□ -0.97
CIT-211ENST00000541841 TNFRSF21O75509 655 aa9.01□□□□□ -0.97
CIT-211ENST00000541841 RPLP1P05386 114 aaKnown RBP9.01□□□□□ -0.97
CIT-211ENST00000541841 GLB1P16278 677 aa9.01□□□□□ -0.97
CIT-211ENST00000541841 PTPRAP18433 802 aa9.01□□□□□ -0.97
CIT-211ENST00000541841 FKBP4Q02790 459 aaKnown RBP eCLIP9.01□□□□□ -0.97
CIT-211ENST00000541841 ALKBH2Q6NS38 261 aa9.01□□□□□ -0.97
CIT-211ENST00000541841 MUC3BQ9H195 1237 aa9.01□□□□□ -0.97
CIT-211ENST00000541841 SRA1Q9HD15 236 aaKnown RBP9.01□□□□□ -0.97
CIT-211ENST00000541841 ADAM11O75078 769 aa9□□□□□ -0.97
CIT-211ENST00000541841 FAM13AO94988 1023 aa9□□□□□ -0.97
CIT-211ENST00000541841 CD68P34810 354 aaPredicted RBP9□□□□□ -0.97
CIT-211ENST00000541841 HGSNATQ68CP4 663 aa9□□□□□ -0.97
CIT-211ENST00000541841 ACAD11Q709F0 780 aa9□□□□□ -0.97
CIT-211ENST00000541841 ZC3HAV1Q7Z2W4 902 aaKnown RBP9□□□□□ -0.97
CIT-211ENST00000541841 MAP4K3Q8IVH8 894 aa9□□□□□ -0.97
CIT-211ENST00000541841 UBASH3BQ8TF42 649 aa9□□□□□ -0.97
CIT-211ENST00000541841 KLHDC7BQ96G42 594 aa9□□□□□ -0.97
CIT-211ENST00000541841 LATS2Q9NRM7 1088 aa9□□□□□ -0.97
CIT-211ENST00000541841 PHACTR2O75167 634 aa8.99□□□□□ -0.97
CIT-211ENST00000541841 DZIP1LQ8IYY4 767 aaKnown RBP8.99□□□□□ -0.97
CIT-211ENST00000541841 CACTIN-AS1Q8N1I8 211 aa8.99□□□□□ -0.97
CIT-211ENST00000541841 TMEM130Q8N3G9 435 aa8.99□□□□□ -0.97
CIT-211ENST00000541841 FOXD4L4Q8WXT5 416 aaPredicted RBP8.99□□□□□ -0.97
CIT-211ENST00000541841 ZKSCAN3Q9BRR0 538 aa8.99□□□□□ -0.97
CIT-211ENST00000541841 H3BRB1 525 aa8.98□□□□□ -0.97
CIT-211ENST00000541841 PDE2AO00408 941 aaPredicted RBP8.98□□□□□ -0.97
CIT-211ENST00000541841 POLR3DP05423 398 aaPredicted RBP8.98□□□□□ -0.97
CIT-211ENST00000541841 SF3B2Q13435 895 aaKnown RBP8.98□□□□□ -0.97
CIT-211ENST00000541841 PRR23CQ6ZRP0 262 aa8.98□□□□□ -0.97
CIT-211ENST00000541841 SLC7A3Q8WY07 619 aa8.98□□□□□ -0.97
CIT-211ENST00000541841 UBL7Q96S82 380 aaPredicted RBP8.98□□□□□ -0.97
CIT-211ENST00000541841 OSMRQ99650 979 aa8.98□□□□□ -0.97
CIT-211ENST00000541841 ADAM19Q9H013 955 aa8.98□□□□□ -0.97
CIT-211ENST00000541841 TUT1Q9H6E5 874 aaKnown RBP8.98□□□□□ -0.97
CIT-211ENST00000541841 MTMR7Q9Y216 660 aa8.98□□□□□ -0.97
CIT-211ENST00000541841 NLRP12P59046 1061 aa8.97□□□□□ -0.97
CIT-211ENST00000541841 SNX29Q8TEQ0 813 aa8.97□□□□□ -0.97
CIT-211ENST00000541841 USTQ9Y2C2 406 aa8.97□□□□□ -0.97
CIT-211ENST00000541841 FAM177BA6PVY3 158 aa8.96□□□□□ -0.98
CIT-211ENST00000541841 H3BRJ5 948 aa8.96□□□□□ -0.98
CIT-211ENST00000541841 PDIA4P13667 645 aaKnown RBP8.96□□□□□ -0.98
CIT-211ENST00000541841 DUOXA2Q1HG44 320 aa8.96□□□□□ -0.98
CIT-211ENST00000541841 FAM117BQ6P1L5 589 aa8.96□□□□□ -0.98
CIT-211ENST00000541841 Q6ZS46 218 aa8.96□□□□□ -0.98
CIT-211ENST00000541841 KIAA1211Q6ZU35 1233 aa8.96□□□□□ -0.98
CIT-211ENST00000541841 GJD3Q8N144 294 aa8.96□□□□□ -0.98
CIT-211ENST00000541841 SEC31BQ9NQW1 1179 aa8.96□□□□□ -0.98
CIT-211ENST00000541841 RETREG2Q8NC44 543 aa8.95□□□□□ -0.98
CIT-211ENST00000541841 METTL12A8MUP2 240 aa8.94□□□□□ -0.98
CIT-211ENST00000541841 ICMTO60725 284 aa8.94□□□□□ -0.98
CIT-211ENST00000541841 CABP4P57796 275 aa8.94□□□□□ -0.98
CIT-211ENST00000541841 ECM1Q16610 540 aa8.94□□□□□ -0.98
CIT-211ENST00000541841 PEAR1Q5VY43 1037 aaPredicted RBP8.94□□□□□ -0.98
CIT-211ENST00000541841 TMEM102Q8N9M5 508 aaPredicted RBP8.94□□□□□ -0.98
CIT-211ENST00000541841 KLHL23Q8NBE8 558 aa8.94□□□□□ -0.98
CIT-211ENST00000541841 ASAP3Q8TDY4 903 aa8.94□□□□□ -0.98
CIT-211ENST00000541841 PMEPA1Q969W9 287 aa8.94□□□□□ -0.98
CIT-211ENST00000541841 NXPE3Q969Y0 559 aa8.94□□□□□ -0.98
CIT-211ENST00000541841 SOX13Q9UN79 622 aa8.94□□□□□ -0.98
CIT-211ENST00000541841 ZBTB7CA1YPR0 619 aa8.93□□□□□ -0.98
CIT-211ENST00000541841 USP5P45974 858 aa8.93□□□□□ -0.98
CIT-211ENST00000541841 GLYCTKQ8IVS8 523 aa8.93□□□□□ -0.98
CIT-211ENST00000541841 ARMC10Q8N2F6 343 aa8.93□□□□□ -0.98
CIT-211ENST00000541841 DCAF11Q8TEB1 546 aa8.93□□□□□ -0.98
CIT-211ENST00000541841 PIP4K2BP78356 416 aa8.92□□□□□ -0.98
CIT-211ENST00000541841 EHHADHQ08426 723 aa8.92□□□□□ -0.98
CIT-211ENST00000541841 USPL1Q5W0Q7 1092 aa8.92□□□□□ -0.98
CIT-211ENST00000541841 VN1R5Q7Z5H4 357 aa8.92□□□□□ -0.98
CIT-211ENST00000541841 AMOTL2Q9Y2J4 779 aa8.92□□□□□ -0.98
CIT-211ENST00000541841 EDN3P14138 238 aa8.91□□□□□ -0.98
CIT-211ENST00000541841 FSTP19883 344 aa8.91□□□□□ -0.98
CIT-211ENST00000541841 ARTNQ5T4W7 220 aa8.91□□□□□ -0.98
CIT-211ENST00000541841 ZFYVE28Q9HCC9 887 aa8.91□□□□□ -0.98
CIT-211ENST00000541841 CCDC9Q9Y3X0 531 aaKnown RBP8.91□□□□□ -0.98
CIT-211ENST00000541841 SOX1O00570 391 aaPredicted RBP8.9□□□□□ -0.98
CIT-211ENST00000541841 BSNDQ8WZ55 320 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms