RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 TAF5LO75529 589 aa17.84■□□□□ 0.45
SUDS3-203ENST00000541591 RPS12P25398 132 aaKnown RBP17.84■□□□□ 0.45
SUDS3-203ENST00000541591 LBX1P52954 281 aa17.84■□□□□ 0.45
SUDS3-203ENST00000541591 FOXO4P98177 505 aa17.84■□□□□ 0.45
SUDS3-203ENST00000541591 CDC37L1Q7L3B6 337 aa17.84■□□□□ 0.45
SUDS3-203ENST00000541591 KRT26Q7Z3Y9 468 aa17.84■□□□□ 0.45
SUDS3-203ENST00000541591 MPHOSPH8Q99549 860 aa17.84■□□□□ 0.45
SUDS3-203ENST00000541591 WBP1LQ9NX94 342 aa17.84■□□□□ 0.45
SUDS3-203ENST00000541591 CSF1RP07333 972 aa17.83■□□□□ 0.44
SUDS3-203ENST00000541591 CHRNDQ07001 517 aa17.83■□□□□ 0.44
SUDS3-203ENST00000541591 SAPCD2Q86UD0 394 aa17.83■□□□□ 0.44
SUDS3-203ENST00000541591 ZC3H15Q8WU90 426 aaKnown RBP17.83■□□□□ 0.44
SUDS3-203ENST00000541591 ZNF804BA4D1E1 1349 aa17.82■□□□□ 0.44
SUDS3-203ENST00000541591 ANKRD18BA2A2Z9 1011 aa17.82■□□□□ 0.44
SUDS3-203ENST00000541591 USP17L3A6NCW0 530 aa17.82■□□□□ 0.44
SUDS3-203ENST00000541591 USP17L4A6NCW7 530 aa17.82■□□□□ 0.44
SUDS3-203ENST00000541591 ANGEL2Q5VTE6 544 aaKnown RBP17.82■□□□□ 0.44
SUDS3-203ENST00000541591 LMBR1LQ6UX01 489 aa17.82■□□□□ 0.44
SUDS3-203ENST00000541591 USP17L1Q7RTZ2 530 aa17.82■□□□□ 0.44
SUDS3-203ENST00000541591 DCPSQ96C86 337 aaKnown RBP17.82■□□□□ 0.44
SUDS3-203ENST00000541591 PLIN1O60240 522 aa17.81■□□□□ 0.44
SUDS3-203ENST00000541591 HSPA8P11142 646 aaKnown RBP17.81■□□□□ 0.44
SUDS3-203ENST00000541591 KCNJ4P48050 445 aa17.81■□□□□ 0.44
SUDS3-203ENST00000541591 CTCFP49711 727 aaPredicted RBP17.81■□□□□ 0.44
SUDS3-203ENST00000541591 SCARF1Q14162 830 aa17.81■□□□□ 0.44
SUDS3-203ENST00000541591 CDCA7LQ96GN5 454 aa17.81■□□□□ 0.44
SUDS3-203ENST00000541591 ZIC5Q96T25 663 aa17.81■□□□□ 0.44
SUDS3-203ENST00000541591 JAG2Q9Y219 1238 aa17.81■□□□□ 0.44
SUDS3-203ENST00000541591 GRM8O00222 908 aa17.8■□□□□ 0.44
SUDS3-203ENST00000541591 ECE1P42892 770 aa17.8■□□□□ 0.44
SUDS3-203ENST00000541591 HUNKP57058 714 aa17.8■□□□□ 0.44
SUDS3-203ENST00000541591 DACT2Q5SW24 774 aa17.8■□□□□ 0.44
SUDS3-203ENST00000541591 SUCLG2Q96I99 432 aa17.8■□□□□ 0.44
SUDS3-203ENST00000541591 GMLQ99445 158 aa17.8■□□□□ 0.44
SUDS3-203ENST00000541591 MYOZ2Q9NPC6 264 aa17.8■□□□□ 0.44
SUDS3-203ENST00000541591 C9orf78Q9NZ63 289 aaPredicted RBP17.8■□□□□ 0.44
SUDS3-203ENST00000541591 PAPPA2Q9BXP8 1791 aa17.8■□□□□ 0.44
SUDS3-203ENST00000541591 ZNF609O15014 1411 aa17.8■□□□□ 0.44
SUDS3-203ENST00000541591 SASH1O94885 1247 aa17.79■□□□□ 0.44
SUDS3-203ENST00000541591 USP17L8P0C7I0 530 aa17.79■□□□□ 0.44
SUDS3-203ENST00000541591 ZNF280AP59817 542 aaPredicted RBP17.79■□□□□ 0.44
SUDS3-203ENST00000541591 IFIT5Q13325 482 aaKnown RBP17.79■□□□□ 0.44
SUDS3-203ENST00000541591 PRAMEF18Q5VWM3 479 aa17.79■□□□□ 0.44
SUDS3-203ENST00000541591 PODNQ7Z5L7 613 aa17.79■□□□□ 0.44
SUDS3-203ENST00000541591 MRPL50Q8N5N7 158 aaKnown RBP17.79■□□□□ 0.44
SUDS3-203ENST00000541591 AGBL3Q8NEM8 1001 aa17.79■□□□□ 0.44
SUDS3-203ENST00000541591 CDCA5Q96FF9 252 aa17.79■□□□□ 0.44
SUDS3-203ENST00000541591 LEMD3Q9Y2U8 911 aa17.79■□□□□ 0.44
SUDS3-203ENST00000541591 NBPF9Q3BBW0 867 aa17.78■□□□□ 0.44
SUDS3-203ENST00000541591 TAF7LQ5H9L4 462 aa17.78■□□□□ 0.44
SUDS3-203ENST00000541591 SRCIN1Q9C0H9 1055 aa17.78■□□□□ 0.44
SUDS3-203ENST00000541591 ANKRD2Q9GZV1 360 aa17.78■□□□□ 0.44
SUDS3-203ENST00000541591 GBA2Q9HCG7 927 aaPredicted RBP17.78■□□□□ 0.44
SUDS3-203ENST00000541591 NBPF7P0C2Y1 421 aaPredicted RBP17.77■□□□□ 0.44
SUDS3-203ENST00000541591 GTF2IP78347 998 aa17.77■□□□□ 0.44
SUDS3-203ENST00000541591 MAP2K1Q02750 393 aaPredicted RBP17.77■□□□□ 0.44
SUDS3-203ENST00000541591 MOB2Q70IA6 237 aa17.77■□□□□ 0.44
SUDS3-203ENST00000541591 KIAA0825Q8IV33 1275 aa17.77■□□□□ 0.44
SUDS3-203ENST00000541591 SULF1Q8IWU6 871 aa17.77■□□□□ 0.44
SUDS3-203ENST00000541591 SSH1Q8WYL5 1049 aa17.77■□□□□ 0.44
SUDS3-203ENST00000541591 COA1Q9GZY4 146 aa17.77■□□□□ 0.44
SUDS3-203ENST00000541591 OTOFQ9HC10 1997 aa17.77■□□□□ 0.43
SUDS3-203ENST00000541591 IRS2Q9Y4H2 1338 aa17.76■□□□□ 0.43
SUDS3-203ENST00000541591 KAZALD1Q96I82 304 aa17.76■□□□□ 0.43
SUDS3-203ENST00000541591 PUS3Q9BZE2 481 aaKnown RBP17.76■□□□□ 0.43
SUDS3-203ENST00000541591 CNNM1Q9NRU3 951 aa17.76■□□□□ 0.43
SUDS3-203ENST00000541591 PCDHAC2Q9Y5I4 1007 aa17.76■□□□□ 0.43
SUDS3-203ENST00000541591 F8W031 263 aaPredicted RBP17.75■□□□□ 0.43
SUDS3-203ENST00000541591 ALDH1L1O75891 902 aa17.75■□□□□ 0.43
SUDS3-203ENST00000541591 SLFN5Q08AF3 891 aa17.75■□□□□ 0.43
SUDS3-203ENST00000541591 CCDC57Q2TAC2 916 aa17.75■□□□□ 0.43
SUDS3-203ENST00000541591 TTLL5Q6EMB2 1281 aa17.75■□□□□ 0.43
SUDS3-203ENST00000541591 E9PSI1 815 aa17.74■□□□□ 0.43
SUDS3-203ENST00000541591 C2orf69Q8N8R5 385 aa17.74■□□□□ 0.43
SUDS3-203ENST00000541591 BEGAINQ9BUH8 593 aa17.74■□□□□ 0.43
SUDS3-203ENST00000541591 BICC1Q9H694 974 aaKnown RBP17.74■□□□□ 0.43
SUDS3-203ENST00000541591 CD209Q9NNX6 404 aa17.74■□□□□ 0.43
SUDS3-203ENST00000541591 PRDM10Q9NQV6 1147 aa17.74■□□□□ 0.43
SUDS3-203ENST00000541591 STRIP1Q5VSL9 837 aa17.73■□□□□ 0.43
SUDS3-203ENST00000541591 RGMBQ6NW40 437 aa17.73■□□□□ 0.43
SUDS3-203ENST00000541591 LDHAL6AQ6ZMR3 332 aa17.73■□□□□ 0.43
SUDS3-203ENST00000541591 CERS5Q8N5B7 392 aa17.73■□□□□ 0.43
SUDS3-203ENST00000541591 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.73■□□□□ 0.43
SUDS3-203ENST00000541591 WNT10BO00744 389 aa17.72■□□□□ 0.43
SUDS3-203ENST00000541591 KLHDC4Q8TBB5 520 aa17.72■□□□□ 0.43
SUDS3-203ENST00000541591 FZD1Q9UP38 647 aa17.72■□□□□ 0.43
SUDS3-203ENST00000541591 AK9Q5TCS8 1911 aa17.72■□□□□ 0.43
SUDS3-203ENST00000541591 FAM155AB1AL88 458 aaPredicted RBP17.71■□□□□ 0.43
SUDS3-203ENST00000541591 MAP2K2P36507 400 aa17.71■□□□□ 0.43
SUDS3-203ENST00000541591 ZNF157P51786 506 aaPredicted RBP17.71■□□□□ 0.43
SUDS3-203ENST00000541591 PRKG1Q13976 671 aa17.71■□□□□ 0.43
SUDS3-203ENST00000541591 ANKRD44Q8N8A2 993 aa17.71■□□□□ 0.43
SUDS3-203ENST00000541591 HHIPL1Q96JK4 782 aa17.71■□□□□ 0.43
SUDS3-203ENST00000541591 AOX1Q06278 1338 aa17.71■□□□□ 0.42
SUDS3-203ENST00000541591 GYG1P46976 350 aa17.7■□□□□ 0.42
SUDS3-203ENST00000541591 LRRC24Q50LG9 513 aa17.7■□□□□ 0.42
SUDS3-203ENST00000541591 OGFOD1Q8N543 542 aa17.7■□□□□ 0.42
SUDS3-203ENST00000541591 SMC4Q9NTJ3 1288 aa17.7■□□□□ 0.42
SUDS3-203ENST00000541591 IQSEC3Q9UPP2 1182 aaPredicted RBP17.7■□□□□ 0.42
SUDS3-203ENST00000541591 MYO3BQ8WXR4 1341 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms