RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 FAM177BA6PVY3 158 aa7.18□□□□□ -1.26
SNHG1-217ENST00000541578 NDUFB5O43674 189 aa7.18□□□□□ -1.26
SNHG1-217ENST00000541578 FURINP09958 794 aa7.18□□□□□ -1.26
SNHG1-217ENST00000541578 ARHGAP4P98171 946 aa7.18□□□□□ -1.26
SNHG1-217ENST00000541578 DOC2BQ14184 412 aa7.18□□□□□ -1.26
SNHG1-217ENST00000541578 ADGRE1Q14246 886 aa7.18□□□□□ -1.26
SNHG1-217ENST00000541578 MBTPS1Q14703 1052 aa7.18□□□□□ -1.26
SNHG1-217ENST00000541578 DCAF11Q8TEB1 546 aa7.18□□□□□ -1.26
SNHG1-217ENST00000541578 POP1Q99575 1024 aaKnown RBP7.18□□□□□ -1.26
SNHG1-217ENST00000541578 FOXD3Q9UJU5 478 aaPredicted RBP7.18□□□□□ -1.26
SNHG1-217ENST00000541578 DLL1O00548 723 aa7.17□□□□□ -1.26
SNHG1-217ENST00000541578 EREGO14944 169 aa7.17□□□□□ -1.26
SNHG1-217ENST00000541578 EDN3P14138 238 aa7.17□□□□□ -1.26
SNHG1-217ENST00000541578 PTPRAP18433 802 aa7.17□□□□□ -1.26
SNHG1-217ENST00000541578 SETDB1Q15047 1291 aa7.17□□□□□ -1.26
SNHG1-217ENST00000541578 TRAIPQ9BWF2 469 aa7.17□□□□□ -1.26
SNHG1-217ENST00000541578 DZANK1Q9NVP4 752 aa7.17□□□□□ -1.26
SNHG1-217ENST00000541578 LINC01387J3KSC0 135 aa7.16□□□□□ -1.26
SNHG1-217ENST00000541578 PDE2AO00408 941 aaPredicted RBP7.16□□□□□ -1.26
SNHG1-217ENST00000541578 PDE3BQ13370 1112 aa7.16□□□□□ -1.26
SNHG1-217ENST00000541578 SUZ12Q15022 739 aaKnown RBP7.16□□□□□ -1.26
SNHG1-217ENST00000541578 FAM117BQ6P1L5 589 aa7.16□□□□□ -1.26
SNHG1-217ENST00000541578 TXNRD3Q86VQ6 643 aa7.16□□□□□ -1.26
SNHG1-217ENST00000541578 CITED4Q96RK1 184 aa7.16□□□□□ -1.26
SNHG1-217ENST00000541578 ADAM19Q9H013 955 aa7.16□□□□□ -1.26
SNHG1-217ENST00000541578 ZFYVE28Q9HCC9 887 aa7.16□□□□□ -1.26
SNHG1-217ENST00000541578 GNEQ9Y223 722 aaKnown RBP7.16□□□□□ -1.26
SNHG1-217ENST00000541578 K7ELQ4 463 aaPredicted RBP7.15□□□□□ -1.26
SNHG1-217ENST00000541578 NEFLP07196 543 aa7.15□□□□□ -1.26
SNHG1-217ENST00000541578 ACPPP15309 386 aa7.15□□□□□ -1.26
SNHG1-217ENST00000541578 CDC25BP30305 580 aa7.15□□□□□ -1.26
SNHG1-217ENST00000541578 OSMRQ99650 979 aa7.15□□□□□ -1.26
SNHG1-217ENST00000541578 SH2B1Q9NRF2 756 aaPredicted RBP7.15□□□□□ -1.26
SNHG1-217ENST00000541578 AMOTL2Q9Y2J4 779 aa7.15□□□□□ -1.26
SNHG1-217ENST00000541578 SOWAHDA6NJG2 315 aa7.14□□□□□ -1.27
SNHG1-217ENST00000541578 NFKBIEO00221 500 aa7.14□□□□□ -1.27
SNHG1-217ENST00000541578 ADAM23O75077 832 aa7.14□□□□□ -1.27
SNHG1-217ENST00000541578 TRPA1O75762 1119 aa7.14□□□□□ -1.27
SNHG1-217ENST00000541578 ADAMTSL4Q6UY14 1074 aa7.14□□□□□ -1.27
SNHG1-217ENST00000541578 WFDC12Q8WWY7 111 aa7.14□□□□□ -1.27
SNHG1-217ENST00000541578 MRPL18Q9H0U6 180 aaKnown RBP7.14□□□□□ -1.27
SNHG1-217ENST00000541578 TPSG1Q9NRR2 321 aa7.14□□□□□ -1.27
SNHG1-217ENST00000541578 FSCN2O14926 492 aa7.13□□□□□ -1.27
SNHG1-217ENST00000541578 EPHA1P21709 976 aa7.13□□□□□ -1.27
SNHG1-217ENST00000541578 IREB2P48200 963 aaKnown RBP7.13□□□□□ -1.27
SNHG1-217ENST00000541578 CABP4P57796 275 aa7.13□□□□□ -1.27
SNHG1-217ENST00000541578 TXNDC11Q6PKC3 985 aa7.13□□□□□ -1.27
SNHG1-217ENST00000541578 TMEM102Q8N9M5 508 aaPredicted RBP7.13□□□□□ -1.27
SNHG1-217ENST00000541578 TMC1Q8TDI8 760 aa7.13□□□□□ -1.27
SNHG1-217ENST00000541578 NXPE3Q969Y0 559 aa7.13□□□□□ -1.27
SNHG1-217ENST00000541578 ZKSCAN3Q9BRR0 538 aa7.13□□□□□ -1.27
SNHG1-217ENST00000541578 POLR3DP05423 398 aaPredicted RBP7.12□□□□□ -1.27
SNHG1-217ENST00000541578 CD68P34810 354 aaPredicted RBP7.12□□□□□ -1.27
SNHG1-217ENST00000541578 TMEM130Q8N3G9 435 aa7.12□□□□□ -1.27
SNHG1-217ENST00000541578 GALNT11Q8NCW6 608 aa7.12□□□□□ -1.27
SNHG1-217ENST00000541578 HHIPQ96QV1 700 aa7.12□□□□□ -1.27
SNHG1-217ENST00000541578 H3BRJ5 948 aa7.11□□□□□ -1.27
SNHG1-217ENST00000541578 NOS3P29474 1203 aa7.11□□□□□ -1.27
SNHG1-217ENST00000541578 KLHL23Q8NBE8 558 aa7.11□□□□□ -1.27
SNHG1-217ENST00000541578 BSNDQ8WZ55 320 aa7.11□□□□□ -1.27
SNHG1-217ENST00000541578 FAM129BQ96TA1 746 aa7.11□□□□□ -1.27
SNHG1-217ENST00000541578 CARD10Q9BWT7 1032 aa7.11□□□□□ -1.27
SNHG1-217ENST00000541578 SEMA6BQ9H3T3 888 aa7.11□□□□□ -1.27
SNHG1-217ENST00000541578 AKTIPQ9H8T0 292 aa7.11□□□□□ -1.27
SNHG1-217ENST00000541578 SEC31BQ9NQW1 1179 aa7.11□□□□□ -1.27
SNHG1-217ENST00000541578 LATS2Q9NRM7 1088 aa7.11□□□□□ -1.27
SNHG1-217ENST00000541578 BIN2Q9UBW5 565 aaPredicted RBP7.11□□□□□ -1.27
SNHG1-217ENST00000541578 PIP4K2BP78356 416 aa7.1□□□□□ -1.27
SNHG1-217ENST00000541578 RSPO4Q2I0M5 234 aaPredicted RBP7.1□□□□□ -1.27
SNHG1-217ENST00000541578 NKAPLQ5M9Q1 402 aa7.1□□□□□ -1.27
SNHG1-217ENST00000541578 PEAR1Q5VY43 1037 aaPredicted RBP7.1□□□□□ -1.27
SNHG1-217ENST00000541578 GALNT12Q8IXK2 581 aa7.1□□□□□ -1.27
SNHG1-217ENST00000541578 WNT8BQ93098 351 aa7.1□□□□□ -1.27
SNHG1-217ENST00000541578 BHLHE41Q9C0J9 482 aaPredicted RBP7.1□□□□□ -1.27
SNHG1-217ENST00000541578 SOX13Q9UN79 622 aa7.1□□□□□ -1.27
SNHG1-217ENST00000541578 PATL2C9JE40 543 aaKnown RBP7.09□□□□□ -1.27
SNHG1-217ENST00000541578 F8W735 103 aaPredicted RBP7.09□□□□□ -1.27
SNHG1-217ENST00000541578 CPNE3O75131 537 aaKnown RBP7.09□□□□□ -1.27
SNHG1-217ENST00000541578 ALX3O95076 343 aa7.09□□□□□ -1.27
SNHG1-217ENST00000541578 ARL4DP49703 201 aa7.09□□□□□ -1.27
SNHG1-217ENST00000541578 KCNA1Q09470 495 aa7.09□□□□□ -1.27
SNHG1-217ENST00000541578 ASAP3Q8TDY4 903 aa7.09□□□□□ -1.27
SNHG1-217ENST00000541578 TP53INP1Q96A56 240 aa7.09□□□□□ -1.27
SNHG1-217ENST00000541578 KLHDC7BQ96G42 594 aa7.09□□□□□ -1.27
SNHG1-217ENST00000541578 DMRTB1Q96MA1 342 aa7.09□□□□□ -1.27
SNHG1-217ENST00000541578 RBCK1Q9BYM8 510 aa7.09□□□□□ -1.27
SNHG1-217ENST00000541578 NIF3L1Q9GZT8 377 aa7.09□□□□□ -1.27
SNHG1-217ENST00000541578 OSGEPQ9NPF4 335 aa7.09□□□□□ -1.27
SNHG1-217ENST00000541578 KCNK4Q9NYG8 393 aa7.09□□□□□ -1.27
SNHG1-217ENST00000541578 A0A1W2PP55 124 aa7.08□□□□□ -1.28
SNHG1-217ENST00000541578 ORC1Q13415 861 aa7.08□□□□□ -1.28
SNHG1-217ENST00000541578 FOXD4L6Q3SYB3 417 aaPredicted RBP7.08□□□□□ -1.28
SNHG1-217ENST00000541578 TMCO4Q5TGY1 634 aa7.08□□□□□ -1.28
SNHG1-217ENST00000541578 USPL1Q5W0Q7 1092 aa7.08□□□□□ -1.28
SNHG1-217ENST00000541578 FOXD4L3Q6VB84 417 aaPredicted RBP7.08□□□□□ -1.28
SNHG1-217ENST00000541578 SSBP4Q9BWG4 385 aaPredicted RBP7.08□□□□□ -1.28
SNHG1-217ENST00000541578 TM4SF5O14894 197 aa7.07□□□□□ -1.28
SNHG1-217ENST00000541578 H2AFB1P0C5Y9 115 aa7.07□□□□□ -1.28
SNHG1-217ENST00000541578 H2AFB2P0C5Z0 115 aa7.07□□□□□ -1.28
SNHG1-217ENST00000541578 C19orf57Q0VDD7 668 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms