RNA–Protein interactions for RNA: ENST00000541354.5

SPOCK3-226, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2 BASIC

Gene SPOCK3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-226ENST00000541354 RPAP1Q9BWH6 1393 aaPredicted RBP17.51■□□□□ 0.39
SPOCK3-226ENST00000541354 RNF113AO15541 343 aaKnown RBP17.51■□□□□ 0.39
SPOCK3-226ENST00000541354 MPHOSPH8Q99549 860 aa17.51■□□□□ 0.39
SPOCK3-226ENST00000541354 RRAGDQ9NQL2 400 aaPredicted RBP17.51■□□□□ 0.39
SPOCK3-226ENST00000541354 CARMIL3Q8ND23 1372 aa17.51■□□□□ 0.39
SPOCK3-226ENST00000541354 A0A0D9SFI3 127 aa17.51■□□□□ 0.39
SPOCK3-226ENST00000541354 TAF5LO75529 589 aa17.51■□□□□ 0.39
SPOCK3-226ENST00000541354 TRAPPC3LQ5T215 181 aa17.51■□□□□ 0.39
SPOCK3-226ENST00000541354 PPP1R9BQ96SB3 815 aa17.51■□□□□ 0.39
SPOCK3-226ENST00000541354 VPS53Q5VIR6 699 aa17.51■□□□□ 0.39
SPOCK3-226ENST00000541354 TPTE2Q6XPS3 522 aa17.51■□□□□ 0.39
SPOCK3-226ENST00000541354 FAM227BQ96M60 508 aa17.51■□□□□ 0.39
SPOCK3-226ENST00000541354 ZSWIM6Q9HCJ5 1215 aa17.51■□□□□ 0.39
SPOCK3-226ENST00000541354 DNAJC2Q99543 621 aaKnown RBP17.5■□□□□ 0.39
SPOCK3-226ENST00000541354 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.5■□□□□ 0.39
SPOCK3-226ENST00000541354 BSDC1Q9NW68 430 aaPredicted RBP17.5■□□□□ 0.39
SPOCK3-226ENST00000541354 RBM8AQ9Y5S9 174 aaKnown RBP17.5■□□□□ 0.39
SPOCK3-226ENST00000541354 PTF1AQ7RTS3 328 aa17.5■□□□□ 0.39
SPOCK3-226ENST00000541354 ARHGEF1Q92888 912 aaKnown RBP17.5■□□□□ 0.39
SPOCK3-226ENST00000541354 MBD3O95983 291 aa17.49■□□□□ 0.39
SPOCK3-226ENST00000541354 PDIA4P13667 645 aaKnown RBP17.49■□□□□ 0.39
SPOCK3-226ENST00000541354 HCLS1P14317 486 aaPredicted RBP17.49■□□□□ 0.39
SPOCK3-226ENST00000541354 TBC1D9BQ66K14 1250 aa17.49■□□□□ 0.39
SPOCK3-226ENST00000541354 GPT2Q8TD30 523 aa17.49■□□□□ 0.39
SPOCK3-226ENST00000541354 ZSCAN31Q96LW9 406 aaPredicted RBP17.49■□□□□ 0.39
SPOCK3-226ENST00000541354 PTH1RQ03431 593 aa17.49■□□□□ 0.39
SPOCK3-226ENST00000541354 ZSCAN23Q3MJ62 389 aa17.49■□□□□ 0.39
SPOCK3-226ENST00000541354 CREB3L3Q68CJ9 461 aa17.49■□□□□ 0.39
SPOCK3-226ENST00000541354 PDS5AQ29RF7 1337 aaKnown RBP17.49■□□□□ 0.39
SPOCK3-226ENST00000541354 GOLIM4O00461 696 aa17.48■□□□□ 0.39
SPOCK3-226ENST00000541354 PLSCR1O15162 318 aa17.48■□□□□ 0.39
SPOCK3-226ENST00000541354 CLCN1P35523 988 aa17.48■□□□□ 0.39
SPOCK3-226ENST00000541354 PRPF40AO75400 957 aaKnown RBP17.48■□□□□ 0.39
SPOCK3-226ENST00000541354 RFC4P35249 363 aa17.48■□□□□ 0.39
SPOCK3-226ENST00000541354 UBE4AQ14139 1066 aa17.48■□□□□ 0.39
SPOCK3-226ENST00000541354 ANKRD1Q15327 319 aa17.48■□□□□ 0.39
SPOCK3-226ENST00000541354 ERFEQ4G0M1 354 aa17.48■□□□□ 0.39
SPOCK3-226ENST00000541354 ANKRD18AQ8IVF6 992 aa17.48■□□□□ 0.39
SPOCK3-226ENST00000541354 CCDC173Q0VFZ6 552 aa17.47■□□□□ 0.39
SPOCK3-226ENST00000541354 UPF3BQ9BZI7 483 aaKnown RBP17.47■□□□□ 0.39
SPOCK3-226ENST00000541354 SLC27A2O14975 620 aa17.47■□□□□ 0.39
SPOCK3-226ENST00000541354 RASEFQ8IZ41 740 aa17.47■□□□□ 0.39
SPOCK3-226ENST00000541354 NLRP3Q96P20 1036 aa17.47■□□□□ 0.39
SPOCK3-226ENST00000541354 SH2B1Q9NRF2 756 aaPredicted RBP17.47■□□□□ 0.39
SPOCK3-226ENST00000541354 HMGB1P09429 215 aaKnown RBP17.46■□□□□ 0.39
SPOCK3-226ENST00000541354 ADORA1P30542 326 aa17.46■□□□□ 0.39
SPOCK3-226ENST00000541354 CYP46A1Q9Y6A2 500 aa17.46■□□□□ 0.39
SPOCK3-226ENST00000541354 WDR33Q9C0J8 1336 aaKnown RBP17.46■□□□□ 0.39
SPOCK3-226ENST00000541354 UBE3CQ15386 1083 aa17.46■□□□□ 0.39
SPOCK3-226ENST00000541354 DDX46Q7L014 1031 aaKnown RBP17.46■□□□□ 0.39
SPOCK3-226ENST00000541354 NBPF5PQ86XG9 351 aaPredicted RBP17.46■□□□□ 0.39
SPOCK3-226ENST00000541354 TMEM87AQ8NBN3 555 aa17.46■□□□□ 0.39
SPOCK3-226ENST00000541354 APPBP2Q92624 585 aa17.46■□□□□ 0.39
SPOCK3-226ENST00000541354 ANKRD2Q9GZV1 360 aa17.46■□□□□ 0.39
SPOCK3-226ENST00000541354 LIMCH1Q9UPQ0 1083 aa17.46■□□□□ 0.39
SPOCK3-226ENST00000541354 SEMA3EO15041 775 aa17.45■□□□□ 0.38
SPOCK3-226ENST00000541354 CAVIN1Q6NZI2 390 aaKnown RBP17.45■□□□□ 0.38
SPOCK3-226ENST00000541354 RUFY3Q7L099 469 aa17.45■□□□□ 0.38
SPOCK3-226ENST00000541354 KLHL34Q8N239 644 aa17.45■□□□□ 0.38
SPOCK3-226ENST00000541354 ZMYM6O95789 1325 aa17.45■□□□□ 0.38
SPOCK3-226ENST00000541354 CCDC102BQ68D86 513 aa17.45■□□□□ 0.38
SPOCK3-226ENST00000541354 CTNNA3Q9UI47 895 aa17.45■□□□□ 0.38
SPOCK3-226ENST00000541354 ZNF804BA4D1E1 1349 aa17.45■□□□□ 0.38
SPOCK3-226ENST00000541354 KCNJ4P48050 445 aa17.45■□□□□ 0.38
SPOCK3-226ENST00000541354 NASPP49321 788 aaPredicted RBP17.45■□□□□ 0.38
SPOCK3-226ENST00000541354 PRPF40BQ6NWY9 871 aaKnown RBP17.45■□□□□ 0.38
SPOCK3-226ENST00000541354 FLAD1Q8NFF5 587 aa17.45■□□□□ 0.38
SPOCK3-226ENST00000541354 DUOX1Q9NRD9 1551 aa17.44■□□□□ 0.38
SPOCK3-226ENST00000541354 CCDC85AQ96PX6 553 aaPredicted RBP17.44■□□□□ 0.38
SPOCK3-226ENST00000541354 ZNF589Q86UQ0 364 aaPredicted RBP17.44■□□□□ 0.38
SPOCK3-226ENST00000541354 NRXN2Q9P2S2 1712 aa17.44■□□□□ 0.38
SPOCK3-226ENST00000541354 GTF2E1P29083 439 aaPredicted RBP17.43■□□□□ 0.38
SPOCK3-226ENST00000541354 AK2P54819 239 aa17.43■□□□□ 0.38
SPOCK3-226ENST00000541354 CHMP4CQ96CF2 233 aa17.43■□□□□ 0.38
SPOCK3-226ENST00000541354 EDC3Q96F86 508 aaKnown RBP17.43■□□□□ 0.38
SPOCK3-226ENST00000541354 SEC31BQ9NQW1 1179 aa17.43■□□□□ 0.38
SPOCK3-226ENST00000541354 LRRC4BQ9NT99 713 aa17.43■□□□□ 0.38
SPOCK3-226ENST00000541354 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.43■□□□□ 0.38
SPOCK3-226ENST00000541354 QSER1Q2KHR3 1735 aa17.43■□□□□ 0.38
SPOCK3-226ENST00000541354 TNS1Q9HBL0 1735 aaKnown RBP17.43■□□□□ 0.38
SPOCK3-226ENST00000541354 MCAMP43121 646 aa17.43■□□□□ 0.38
SPOCK3-226ENST00000541354 CHRNDQ07001 517 aa17.43■□□□□ 0.38
SPOCK3-226ENST00000541354 GNL3LQ9NVN8 582 aaKnown RBP17.43■□□□□ 0.38
SPOCK3-226ENST00000541354 MAST3O60307 1309 aa17.42■□□□□ 0.38
SPOCK3-226ENST00000541354 ZAP70P43403 619 aa17.42■□□□□ 0.38
SPOCK3-226ENST00000541354 LRSAM1Q6UWE0 723 aa17.42■□□□□ 0.38
SPOCK3-226ENST00000541354 ADD2P35612 726 aa17.42■□□□□ 0.38
SPOCK3-226ENST00000541354 FBXL16Q8N461 479 aa17.42■□□□□ 0.38
SPOCK3-226ENST00000541354 PDRG1Q9NUG6 133 aa17.42■□□□□ 0.38
SPOCK3-226ENST00000541354 TMEM63CQ9P1W3 806 aa17.42■□□□□ 0.38
SPOCK3-226ENST00000541354 SRP68Q9UHB9 627 aaKnown RBP17.42■□□□□ 0.38
SPOCK3-226ENST00000541354 LAMA4Q16363 1823 aa17.42■□□□□ 0.38
SPOCK3-226ENST00000541354 JAKMIP1Q96N16 626 aaKnown RBP17.41■□□□□ 0.38
SPOCK3-226ENST00000541354 TNRC6CQ9HCJ0 1690 aaKnown RBP17.41■□□□□ 0.38
SPOCK3-226ENST00000541354 ESPNB1AK53 854 aa17.41■□□□□ 0.38
SPOCK3-226ENST00000541354 CASTP20810 708 aaKnown RBP17.41■□□□□ 0.38
SPOCK3-226ENST00000541354 HS1BP3Q53T59 392 aa17.41■□□□□ 0.38
SPOCK3-226ENST00000541354 KIAA1551Q9HCM1 1747 aa17.4■□□□□ 0.38
SPOCK3-226ENST00000541354 RPS6KB1P23443 525 aa17.4■□□□□ 0.38
SPOCK3-226ENST00000541354 RPS8P62241 208 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms