RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 MINPP1Q9UNW1 487 aa34.52■■■■□ 3.12
CHFR-218ENST00000540963 MAP3K2Q9Y2U5 619 aa34.52■■■■□ 3.12
CHFR-218ENST00000540963 SOX10P56693 466 aa34.5■■■■□ 3.11
CHFR-218ENST00000540963 NOM1Q5C9Z4 860 aaKnown RBP34.5■■■■□ 3.11
CHFR-218ENST00000540963 DACT2Q5SW24 774 aa34.5■■■■□ 3.11
CHFR-218ENST00000540963 STRIP1Q5VSL9 837 aa34.5■■■■□ 3.11
CHFR-218ENST00000540963 KSR2Q6VAB6 950 aa34.5■■■■□ 3.11
CHFR-218ENST00000540963 SPEF2Q9C093 1822 aa34.5■■■■□ 3.11
CHFR-218ENST00000540963 COA1Q9GZY4 146 aa34.49■■■■□ 3.11
CHFR-218ENST00000540963 NF2P35240 595 aa34.48■■■■□ 3.11
CHFR-218ENST00000540963 CCT4P50991 539 aaKnown RBP34.48■■■■□ 3.11
CHFR-218ENST00000540963 NBPF9Q3BBW0 867 aa34.48■■■■□ 3.11
CHFR-218ENST00000540963 IGKV5-2P06315 115 aa34.47■■■■□ 3.11
CHFR-218ENST00000540963 TM4SF4P48230 202 aa34.47■■■■□ 3.11
CHFR-218ENST00000540963 NEXNQ0ZGT2 675 aa34.47■■■■□ 3.11
CHFR-218ENST00000540963 LEMD3Q9Y2U8 911 aa34.47■■■■□ 3.11
CHFR-218ENST00000540963 UBE2Q2LH0YL09 131 aa34.46■■■■□ 3.11
CHFR-218ENST00000540963 WNT10BO00744 389 aa34.46■■■■□ 3.11
CHFR-218ENST00000540963 GREM2Q9H772 168 aa34.46■■■■□ 3.11
CHFR-218ENST00000540963 PRKRIP1Q9H875 184 aaPredicted RBP34.46■■■■□ 3.11
CHFR-218ENST00000540963 PI4KAP2A4QPH2 592 aa34.45■■■■□ 3.11
CHFR-218ENST00000540963 MOB2Q70IA6 237 aa34.45■■■■□ 3.11
CHFR-218ENST00000540963 PI4KAP1Q8N8J0 262 aa34.45■■■■□ 3.11
CHFR-218ENST00000540963 HDAC9Q9UKV0 1011 aa34.44■■■■□ 3.1
CHFR-218ENST00000540963 HPS5Q9UPZ3 1129 aa34.44■■■■□ 3.1
CHFR-218ENST00000540963 WTIPA6NIX2 430 aaPredicted RBP34.43■■■■□ 3.1
CHFR-218ENST00000540963 ZNF296Q8WUU4 475 aaPredicted RBP34.43■■■■□ 3.1
CHFR-218ENST00000540963 TTLL12Q14166 644 aaPredicted RBP34.42■■■■□ 3.1
CHFR-218ENST00000540963 CFHR5Q9BXR6 569 aa34.42■■■■□ 3.1
CHFR-218ENST00000540963 IGHMBP2P38935 993 aaKnown RBP34.41■■■■□ 3.1
CHFR-218ENST00000540963 SREBF2Q12772 1141 aa34.41■■■■□ 3.1
CHFR-218ENST00000540963 PRAMEF18Q5VWM3 479 aa34.41■■■■□ 3.1
CHFR-218ENST00000540963 STK31Q9BXU1 1019 aa34.41■■■■□ 3.1
CHFR-218ENST00000540963 SCAF8Q9UPN6 1271 aaKnown RBP34.41■■■■□ 3.1
CHFR-218ENST00000540963 NEURL1BA8MQ27 555 aa34.4■■■■□ 3.1
CHFR-218ENST00000540963 TBC1D8O95759 1140 aa34.4■■■■□ 3.1
CHFR-218ENST00000540963 APOBEC3FQ8IUX4 373 aaKnown RBP34.4■■■■□ 3.1
CHFR-218ENST00000540963 TSPYL6Q8N831 410 aa34.4■■■■□ 3.1
CHFR-218ENST00000540963 ANKRD2Q9GZV1 360 aa34.4■■■■□ 3.1
CHFR-218ENST00000540963 H7C1W4 665 aa34.39■■■■□ 3.1
CHFR-218ENST00000540963 ARMC9Q7Z3E5 817 aa34.39■■■■□ 3.1
CHFR-218ENST00000540963 MXD3Q9BW11 206 aa34.39■■■■□ 3.1
CHFR-218ENST00000540963 PLA2G12BQ9BX93 195 aa34.39■■■■□ 3.1
CHFR-218ENST00000540963 PRPF38BQ5VTL8 546 aaKnown RBP34.38■■■■□ 3.09
CHFR-218ENST00000540963 TTLL5Q6EMB2 1281 aa34.38■■■■□ 3.09
CHFR-218ENST00000540963 ZNF804BA4D1E1 1349 aa34.37■■■■□ 3.09
CHFR-218ENST00000540963 GPR25O00155 361 aa34.37■■■■□ 3.09
CHFR-218ENST00000540963 CWF19L2Q2TBE0 894 aaKnown RBP34.37■■■■□ 3.09
CHFR-218ENST00000540963 FBXW7Q969H0 707 aa34.37■■■■□ 3.09
CHFR-218ENST00000540963 COL1A1P02452 1464 aaPredicted RBP34.37■■■■□ 3.09
CHFR-218ENST00000540963 TXNRD3Q86VQ6 643 aa34.36■■■■□ 3.09
CHFR-218ENST00000540963 UBE3BQ7Z3V4 1068 aa34.35■■■■□ 3.09
CHFR-218ENST00000540963 ZBED3Q96IU2 234 aaPredicted RBP34.35■■■■□ 3.09
CHFR-218ENST00000540963 LDLRAD1Q5T700 205 aa34.34■■■■□ 3.09
CHFR-218ENST00000540963 FBXO46Q6PJ61 603 aaPredicted RBP34.34■■■■□ 3.09
CHFR-218ENST00000540963 CACNA1FO60840 1977 aa34.34■■■■□ 3.09
CHFR-218ENST00000540963 SASH1O94885 1247 aa34.33■■■■□ 3.09
CHFR-218ENST00000540963 PTPN12Q05209 780 aaKnown RBP34.33■■■■□ 3.09
CHFR-218ENST00000540963 MPHOSPH8Q99549 860 aa34.33■■■■□ 3.09
CHFR-218ENST00000540963 ALDH1A1P00352 501 aa34.32■■■■□ 3.08
CHFR-218ENST00000540963 ITGA6P23229 1130 aa34.32■■■■□ 3.08
CHFR-218ENST00000540963 CSF1RP07333 972 aa34.31■■■■□ 3.08
CHFR-218ENST00000540963 GCKRQ14397 625 aa34.31■■■■□ 3.08
CHFR-218ENST00000540963 KIAA0825Q8IV33 1275 aa34.31■■■■□ 3.08
CHFR-218ENST00000540963 ECM29Q5VYK3 1845 aa34.3■■■■□ 3.08
CHFR-218ENST00000540963 FKTNO75072 461 aa34.3■■■■□ 3.08
CHFR-218ENST00000540963 INHBEP58166 350 aa34.3■■■■□ 3.08
CHFR-218ENST00000540963 CCDC27Q2M243 656 aa34.3■■■■□ 3.08
CHFR-218ENST00000540963 SPRYD7Q5W111 196 aa34.3■■■■□ 3.08
CHFR-218ENST00000540963 LAMB1P07942 1786 aa34.3■■■■□ 3.08
CHFR-218ENST00000540963 GTF2IP78347 998 aa34.29■■■■□ 3.08
CHFR-218ENST00000540963 TWISTNBQ3B726 338 aaPredicted RBP34.29■■■■□ 3.08
CHFR-218ENST00000540963 MYH16Q9H6N6 1097 aa34.29■■■■□ 3.08
CHFR-218ENST00000540963 SLC4A2P04920 1241 aa34.28■■■■□ 3.08
CHFR-218ENST00000540963 MTMR14Q8NCE2 650 aa34.28■■■■□ 3.08
CHFR-218ENST00000540963 TSR2Q969E8 191 aaKnown RBP34.28■■■■□ 3.08
CHFR-218ENST00000540963 PPP2R3BQ9Y5P8 575 aa34.28■■■■□ 3.08
CHFR-218ENST00000540963 UNCXA6NJT0 531 aa34.27■■■■□ 3.08
CHFR-218ENST00000540963 KLRK1P26718 216 aa34.27■■■■□ 3.08
CHFR-218ENST00000540963 CASP7P55210 303 aa34.27■■■■□ 3.08
CHFR-218ENST00000540963 MKRN3Q13064 507 aaKnown RBP34.27■■■■□ 3.08
CHFR-218ENST00000540963 MAP3K11Q16584 847 aa34.27■■■■□ 3.08
CHFR-218ENST00000540963 C15orf52Q6ZUT6 534 aaKnown RBP34.27■■■■□ 3.08
CHFR-218ENST00000540963 CD209Q9NNX6 404 aa34.27■■■■□ 3.08
CHFR-218ENST00000540963 ANGEL1Q9UNK9 670 aaKnown RBP34.27■■■■□ 3.08
CHFR-218ENST00000540963 MANSC4A6NHS7 340 aaPredicted RBP34.26■■■■□ 3.08
CHFR-218ENST00000540963 KCNJ4P48050 445 aa34.26■■■■□ 3.08
CHFR-218ENST00000540963 G2E3Q7L622 706 aa34.26■■■■□ 3.08
CHFR-218ENST00000540963 CHRNDQ07001 517 aa34.25■■■■□ 3.07
CHFR-218ENST00000540963 DLGAP5Q15398 846 aa34.25■■■■□ 3.07
CHFR-218ENST00000540963 DEFB129Q9H1M3 183 aa34.25■■■■□ 3.07
CHFR-218ENST00000540963 LINS1Q8NG48 757 aa34.24■■■■□ 3.07
CHFR-218ENST00000540963 ZBTB48P10074 688 aaPredicted RBP34.23■■■■□ 3.07
CHFR-218ENST00000540963 FLIIQ13045 1269 aa34.23■■■■□ 3.07
CHFR-218ENST00000540963 PRKG1Q13976 671 aa34.23■■■■□ 3.07
CHFR-218ENST00000540963 IL16Q14005 1332 aa34.23■■■■□ 3.07
CHFR-218ENST00000540963 IRS2Q9Y4H2 1338 aa34.23■■■■□ 3.07
CHFR-218ENST00000540963 PPP1R12BO60237 982 aaPredicted RBP34.22■■■■□ 3.07
CHFR-218ENST00000540963 FKBP1AP62942 108 aaKnown RBP34.22■■■■□ 3.07
CHFR-218ENST00000540963 DNAAF4Q8WXU2 420 aa34.22■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms