RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 GNAI3P08754 354 aa21.15■□□□□ 0.98
CD9-209ENST00000540891 DZIP1LQ8IYY4 767 aaKnown RBP21.15■□□□□ 0.98
CD9-209ENST00000540891 DPF2Q92785 391 aa21.15■□□□□ 0.98
CD9-209ENST00000540891 ADARB2Q9NS39 739 aaKnown RBP21.15■□□□□ 0.98
CD9-209ENST00000540891 ZNF609O15014 1411 aa21.14■□□□□ 0.98
CD9-209ENST00000540891 MROH5Q6ZUA9 1318 aa21.14■□□□□ 0.97
CD9-209ENST00000540891 ZNF646O15015 1829 aaPredicted RBP21.14■□□□□ 0.97
CD9-209ENST00000540891 VGLL2Q8N8G2 317 aa21.14■□□□□ 0.97
CD9-209ENST00000540891 CNOT7Q9UIV1 285 aaKnown RBP21.14■□□□□ 0.97
CD9-209ENST00000540891 HDAC5Q9UQL6 1122 aa21.14■□□□□ 0.97
CD9-209ENST00000540891 RPS12P25398 132 aaKnown RBP21.13■□□□□ 0.97
CD9-209ENST00000540891 USP50Q70EL3 339 aaPredicted RBP21.13■□□□□ 0.97
CD9-209ENST00000540891 MICALL2Q8IY33 904 aa21.13■□□□□ 0.97
CD9-209ENST00000540891 USP17L3A6NCW0 530 aa21.12■□□□□ 0.97
CD9-209ENST00000540891 USP17L4A6NCW7 530 aa21.12■□□□□ 0.97
CD9-209ENST00000540891 HIRAP54198 1017 aaPredicted RBP21.12■□□□□ 0.97
CD9-209ENST00000540891 UBE4AQ14139 1066 aa21.12■□□□□ 0.97
CD9-209ENST00000540891 RSBN1LQ6PCB5 846 aaPredicted RBP21.12■□□□□ 0.97
CD9-209ENST00000540891 USP17L1Q7RTZ2 530 aa21.12■□□□□ 0.97
CD9-209ENST00000540891 TRPM4Q8TD43 1214 aa21.12■□□□□ 0.97
CD9-209ENST00000540891 CD209Q9NNX6 404 aa21.12■□□□□ 0.97
CD9-209ENST00000540891 RCAN3Q9UKA8 241 aa21.12■□□□□ 0.97
CD9-209ENST00000540891 CLEC11AQ9Y240 323 aa21.12■□□□□ 0.97
CD9-209ENST00000540891 EYA2O00167 538 aa21.11■□□□□ 0.97
CD9-209ENST00000540891 ITGBL1O95965 494 aaPredicted RBP21.11■□□□□ 0.97
CD9-209ENST00000540891 MTX1Q13505 466 aa21.11■□□□□ 0.97
CD9-209ENST00000540891 METTL24Q5JXM2 366 aa21.11■□□□□ 0.97
CD9-209ENST00000540891 DACT2Q5SW24 774 aa21.11■□□□□ 0.97
CD9-209ENST00000540891 ATG9AQ7Z3C6 839 aa21.11■□□□□ 0.97
CD9-209ENST00000540891 FTSJ3Q8IY81 847 aaKnown RBP21.11■□□□□ 0.97
CD9-209ENST00000540891 GMLQ99445 158 aa21.11■□□□□ 0.97
CD9-209ENST00000540891 PDE8BO95263 885 aa21.1■□□□□ 0.97
CD9-209ENST00000540891 EGFRP00533 1210 aa21.1■□□□□ 0.97
CD9-209ENST00000540891 GNAI2P04899 355 aa21.1■□□□□ 0.97
CD9-209ENST00000540891 MAP1SQ66K74 1059 aaPredicted RBP21.1■□□□□ 0.97
CD9-209ENST00000540891 MXD3Q9BW11 206 aa21.1■□□□□ 0.97
CD9-209ENST00000540891 PASKQ96RG2 1323 aa21.09■□□□□ 0.97
CD9-209ENST00000540891 APLP1P51693 650 aa21.09■□□□□ 0.97
CD9-209ENST00000540891 STRIP1Q5VSL9 837 aa21.09■□□□□ 0.97
CD9-209ENST00000540891 SAMD7Q7Z3H4 446 aa21.09■□□□□ 0.97
CD9-209ENST00000540891 AGBL3Q8NEM8 1001 aa21.09■□□□□ 0.97
CD9-209ENST00000540891 PANK1Q8TE04 598 aa21.09■□□□□ 0.97
CD9-209ENST00000540891 PA2G4Q9UQ80 394 aaKnown RBP21.09■□□□□ 0.97
CD9-209ENST00000540891 H7C1D1 291 aa21.08■□□□□ 0.97
CD9-209ENST00000540891 ZBTB7BO15156 539 aaPredicted RBP21.08■□□□□ 0.97
CD9-209ENST00000540891 IL1R1P14778 569 aa21.08■□□□□ 0.97
CD9-209ENST00000540891 HTRA3P83110 453 aa21.08■□□□□ 0.97
CD9-209ENST00000540891 ITPRIPQ8IWB1 547 aa21.08■□□□□ 0.97
CD9-209ENST00000540891 CNTROBQ8N137 903 aa21.08■□□□□ 0.97
CD9-209ENST00000540891 SIL1Q9H173 461 aa21.08■□□□□ 0.97
CD9-209ENST00000540891 COPRSQ9NQ92 184 aa21.08■□□□□ 0.97
CD9-209ENST00000540891 FBXO3Q9UK99 471 aa21.08■□□□□ 0.97
CD9-209ENST00000540891 SRGAP3O43295 1099 aa21.07■□□□□ 0.96
CD9-209ENST00000540891 CIAO1O76071 339 aa21.07■□□□□ 0.96
CD9-209ENST00000540891 FGFR2P21802 821 aa21.07■□□□□ 0.96
CD9-209ENST00000540891 GYG1P46976 350 aa21.07■□□□□ 0.96
CD9-209ENST00000540891 ZNF280AP59817 542 aaPredicted RBP21.07■□□□□ 0.96
CD9-209ENST00000540891 GTF2IP78347 998 aa21.07■□□□□ 0.96
CD9-209ENST00000540891 ZNF804AQ7Z570 1209 aa21.07■□□□□ 0.96
CD9-209ENST00000540891 FAM84BQ96KN1 310 aaPredicted RBP21.07■□□□□ 0.96
CD9-209ENST00000540891 PGAP2Q9UHJ9 254 aa21.07■□□□□ 0.96
CD9-209ENST00000540891 PNMA6EA0A0J9YXQ4 647 aa21.06■□□□□ 0.96
CD9-209ENST00000540891 TBC1D10BQ4KMP7 808 aaPredicted RBP21.06■□□□□ 0.96
CD9-209ENST00000540891 TTLL5Q6EMB2 1281 aa21.06■□□□□ 0.96
CD9-209ENST00000540891 FBXW7Q969H0 707 aa21.06■□□□□ 0.96
CD9-209ENST00000540891 YTHDC1Q96MU7 727 aaKnown RBP21.05■□□□□ 0.96
CD9-209ENST00000540891 C1orf115Q9H7X2 142 aa21.05■□□□□ 0.96
CD9-209ENST00000540891 USP17L8P0C7I0 530 aa21.04■□□□□ 0.96
CD9-209ENST00000540891 HIBADHP31937 336 aaKnown RBP21.04■□□□□ 0.96
CD9-209ENST00000540891 PUM3Q15397 648 aaKnown RBP21.04■□□□□ 0.96
CD9-209ENST00000540891 RBM26Q5T8P6 1007 aaKnown RBP21.04■□□□□ 0.96
CD9-209ENST00000540891 FBXO33Q7Z6M2 555 aa21.04■□□□□ 0.96
CD9-209ENST00000540891 TDRD7Q8NHU6 1098 aaKnown RBP21.04■□□□□ 0.96
CD9-209ENST00000540891 ZC3H15Q8WU90 426 aaKnown RBP21.04■□□□□ 0.96
CD9-209ENST00000540891 MYO3BQ8WXR4 1341 aa21.04■□□□□ 0.96
CD9-209ENST00000540891 IL15P40933 162 aaPredicted RBP21.03■□□□□ 0.96
CD9-209ENST00000540891 FMR1Q06787 632 aaKnown RBP eCLIP21.03■□□□□ 0.96
CD9-209ENST00000540891 KIF4BQ2VIQ3 1234 aa21.03■□□□□ 0.96
CD9-209ENST00000540891 CERS5Q8N5B7 392 aa21.03■□□□□ 0.96
CD9-209ENST00000540891 CEP350Q5VT06 3117 aa21.03■□□□□ 0.96
CD9-209ENST00000540891 DNAJC5GQ8N7S2 189 aa21.02■□□□□ 0.96
CD9-209ENST00000540891 JAG2Q9Y219 1238 aa21.02■□□□□ 0.96
CD9-209ENST00000540891 TRAF5O00463 557 aa21.01■□□□□ 0.95
CD9-209ENST00000540891 SASH1O94885 1247 aa21.01■□□□□ 0.95
CD9-209ENST00000540891 MS4A1P11836 297 aa21.01■□□□□ 0.95
CD9-209ENST00000540891 POLA2Q14181 598 aa21.01■□□□□ 0.95
CD9-209ENST00000540891 MYOZ2Q9NPC6 264 aa21.01■□□□□ 0.95
CD9-209ENST00000540891 CEP126Q9P2H0 1117 aa21.01■□□□□ 0.95
CD9-209ENST00000540891 ASTN2O75129 1339 aaPredicted RBP21.01■□□□□ 0.95
CD9-209ENST00000540891 FAM205AQ6ZU69 1335 aa21.01■□□□□ 0.95
CD9-209ENST00000540891 BCAMP50895 628 aa21■□□□□ 0.95
CD9-209ENST00000540891 FKBP1AP62942 108 aaKnown RBP21■□□□□ 0.95
CD9-209ENST00000540891 ATP8B2P98198 1209 aa21■□□□□ 0.95
CD9-209ENST00000540891 MVPQ14764 893 aaKnown RBP21■□□□□ 0.95
CD9-209ENST00000540891 C20orf194Q5TEA3 1177 aa21■□□□□ 0.95
CD9-209ENST00000540891 LPIN2Q92539 896 aa21■□□□□ 0.95
CD9-209ENST00000540891 GLIS2Q9BZE0 524 aaPredicted RBP21■□□□□ 0.95
CD9-209ENST00000540891 COG6Q9Y2V7 657 aa21■□□□□ 0.95
CD9-209ENST00000540891 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21■□□□□ 0.95
CD9-209ENST00000540891 IFIT1P09914 478 aaKnown RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms