RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 ZNF521Q96K83 1311 aa18.44■□□□□ 0.54
MSRB3-209ENST00000540804 ZNF280AP59817 542 aaPredicted RBP18.43■□□□□ 0.54
MSRB3-209ENST00000540804 MAP2K1Q02750 393 aaPredicted RBP18.43■□□□□ 0.54
MSRB3-209ENST00000540804 SCARF1Q14162 830 aa18.43■□□□□ 0.54
MSRB3-209ENST00000540804 PODNQ7Z5L7 613 aa18.43■□□□□ 0.54
MSRB3-209ENST00000540804 AGBL3Q8NEM8 1001 aa18.43■□□□□ 0.54
MSRB3-209ENST00000540804 HELBQ8NG08 1087 aaPredicted RBP18.43■□□□□ 0.54
MSRB3-209ENST00000540804 MPHOSPH8Q99549 860 aa18.43■□□□□ 0.54
MSRB3-209ENST00000540804 TRPM7Q96QT4 1865 aa18.43■□□□□ 0.54
MSRB3-209ENST00000540804 TAF5LO75529 589 aa18.42■□□□□ 0.54
MSRB3-209ENST00000540804 CHRNDQ07001 517 aa18.42■□□□□ 0.54
MSRB3-209ENST00000540804 ANGEL2Q5VTE6 544 aaKnown RBP18.42■□□□□ 0.54
MSRB3-209ENST00000540804 SLC4A10Q6U841 1118 aa18.42■□□□□ 0.54
MSRB3-209ENST00000540804 ZNF594Q96JF6 807 aaPredicted RBP18.42■□□□□ 0.54
MSRB3-209ENST00000540804 PRDM10Q9NQV6 1147 aa18.42■□□□□ 0.54
MSRB3-209ENST00000540804 CHMP3Q9Y3E7 222 aa18.42■□□□□ 0.54
MSRB3-209ENST00000540804 ZNF804BA4D1E1 1349 aa18.42■□□□□ 0.54
MSRB3-209ENST00000540804 THSD7BQ9C0I4 1608 aa18.41■□□□□ 0.54
MSRB3-209ENST00000540804 ANKRD18BA2A2Z9 1011 aa18.41■□□□□ 0.54
MSRB3-209ENST00000540804 USP17L8P0C7I0 530 aa18.41■□□□□ 0.54
MSRB3-209ENST00000540804 HUNKP57058 714 aa18.41■□□□□ 0.54
MSRB3-209ENST00000540804 DACT2Q5SW24 774 aa18.41■□□□□ 0.54
MSRB3-209ENST00000540804 LMBR1LQ6UX01 489 aa18.41■□□□□ 0.54
MSRB3-209ENST00000540804 MYOZ2Q9NPC6 264 aa18.41■□□□□ 0.54
MSRB3-209ENST00000540804 LEMD3Q9Y2U8 911 aa18.41■□□□□ 0.54
MSRB3-209ENST00000540804 NBPF9Q3BBW0 867 aa18.39■□□□□ 0.53
MSRB3-209ENST00000540804 SULF1Q8IWU6 871 aa18.39■□□□□ 0.53
MSRB3-209ENST00000540804 CDCA5Q96FF9 252 aa18.39■□□□□ 0.53
MSRB3-209ENST00000540804 ANKRD2Q9GZV1 360 aa18.39■□□□□ 0.53
MSRB3-209ENST00000540804 COA1Q9GZY4 146 aa18.39■□□□□ 0.53
MSRB3-209ENST00000540804 GBA2Q9HCG7 927 aaPredicted RBP18.39■□□□□ 0.53
MSRB3-209ENST00000540804 ZNF609O15014 1411 aa18.39■□□□□ 0.53
MSRB3-209ENST00000540804 MYH3P11055 1940 aa18.39■□□□□ 0.53
MSRB3-209ENST00000540804 GRM8O00222 908 aa18.38■□□□□ 0.53
MSRB3-209ENST00000540804 MAP2K2P36507 400 aa18.38■□□□□ 0.53
MSRB3-209ENST00000540804 IFIT5Q13325 482 aaKnown RBP18.38■□□□□ 0.53
MSRB3-209ENST00000540804 PRAMEF18Q5VWM3 479 aa18.38■□□□□ 0.53
MSRB3-209ENST00000540804 HHIPL1Q96JK4 782 aa18.38■□□□□ 0.53
MSRB3-209ENST00000540804 PLIN1O60240 522 aa18.37■□□□□ 0.53
MSRB3-209ENST00000540804 KCNJ4P48050 445 aa18.37■□□□□ 0.53
MSRB3-209ENST00000540804 GTF2IP78347 998 aa18.37■□□□□ 0.53
MSRB3-209ENST00000540804 MRPL50Q8N5N7 158 aaKnown RBP18.37■□□□□ 0.53
MSRB3-209ENST00000540804 SUCLG2Q96I99 432 aa18.37■□□□□ 0.53
MSRB3-209ENST00000540804 IRS2Q9Y4H2 1338 aa18.37■□□□□ 0.53
MSRB3-209ENST00000540804 FAM155AB1AL88 458 aaPredicted RBP18.36■□□□□ 0.53
MSRB3-209ENST00000540804 SASH1O94885 1247 aa18.36■□□□□ 0.53
MSRB3-209ENST00000540804 STRIP1Q5VSL9 837 aa18.36■□□□□ 0.53
MSRB3-209ENST00000540804 TTLL5Q6EMB2 1281 aa18.36■□□□□ 0.53
MSRB3-209ENST00000540804 RGMBQ6NW40 437 aa18.36■□□□□ 0.53
MSRB3-209ENST00000540804 MOB2Q70IA6 237 aa18.36■□□□□ 0.53
MSRB3-209ENST00000540804 C2orf69Q8N8R5 385 aa18.36■□□□□ 0.53
MSRB3-209ENST00000540804 CDCA7LQ96GN5 454 aa18.36■□□□□ 0.53
MSRB3-209ENST00000540804 KAZALD1Q96I82 304 aa18.36■□□□□ 0.53
MSRB3-209ENST00000540804 BEGAINQ9BUH8 593 aa18.36■□□□□ 0.53
MSRB3-209ENST00000540804 SRCIN1Q9C0H9 1055 aa18.36■□□□□ 0.53
MSRB3-209ENST00000540804 C9orf78Q9NZ63 289 aaPredicted RBP18.36■□□□□ 0.53
MSRB3-209ENST00000540804 NBPF7P0C2Y1 421 aaPredicted RBP18.35■□□□□ 0.53
MSRB3-209ENST00000540804 KIAA0825Q8IV33 1275 aa18.35■□□□□ 0.53
MSRB3-209ENST00000540804 CD209Q9NNX6 404 aa18.35■□□□□ 0.53
MSRB3-209ENST00000540804 JAG2Q9Y219 1238 aa18.35■□□□□ 0.53
MSRB3-209ENST00000540804 ZNF646O15015 1829 aaPredicted RBP18.35■□□□□ 0.53
MSRB3-209ENST00000540804 ALDH1L1O75891 902 aa18.34■□□□□ 0.53
MSRB3-209ENST00000540804 CCDC57Q2TAC2 916 aa18.34■□□□□ 0.53
MSRB3-209ENST00000540804 PUS3Q9BZE2 481 aaKnown RBP18.34■□□□□ 0.53
MSRB3-209ENST00000540804 PSME4Q14997 1843 aa18.34■□□□□ 0.53
MSRB3-209ENST00000540804 WNT10BO00744 389 aa18.33■□□□□ 0.52
MSRB3-209ENST00000540804 ZNF157P51786 506 aaPredicted RBP18.33■□□□□ 0.52
MSRB3-209ENST00000540804 BRPF1P55201 1214 aaPredicted RBP18.33■□□□□ 0.52
MSRB3-209ENST00000540804 TAF7LQ5H9L4 462 aa18.33■□□□□ 0.52
MSRB3-209ENST00000540804 LDHAL6AQ6ZMR3 332 aa18.33■□□□□ 0.52
MSRB3-209ENST00000540804 CERS5Q8N5B7 392 aa18.33■□□□□ 0.52
MSRB3-209ENST00000540804 SSH1Q8WYL5 1049 aa18.33■□□□□ 0.52
MSRB3-209ENST00000540804 CNNM1Q9NRU3 951 aa18.33■□□□□ 0.52
MSRB3-209ENST00000540804 PCDHAC2Q9Y5I4 1007 aa18.33■□□□□ 0.52
MSRB3-209ENST00000540804 KIF23Q02241 960 aaPredicted RBP18.32■□□□□ 0.52
MSRB3-209ENST00000540804 SLFN5Q08AF3 891 aa18.32■□□□□ 0.52
MSRB3-209ENST00000540804 NOGQ13253 232 aa18.32■□□□□ 0.52
MSRB3-209ENST00000540804 OGFOD1Q8N543 542 aa18.32■□□□□ 0.52
MSRB3-209ENST00000540804 MYO3BQ8WXR4 1341 aa18.31■□□□□ 0.52
MSRB3-209ENST00000540804 E9PSI1 815 aa18.31■□□□□ 0.52
MSRB3-209ENST00000540804 F8W031 263 aaPredicted RBP18.31■□□□□ 0.52
MSRB3-209ENST00000540804 POLR2AP24928 1970 aaKnown RBP18.31■□□□□ 0.52
MSRB3-209ENST00000540804 PITPNM2Q9BZ72 1349 aa18.3■□□□□ 0.52
MSRB3-209ENST00000540804 UBE2Q2LH0YL09 131 aa18.3■□□□□ 0.52
MSRB3-209ENST00000540804 C15orf52Q6ZUT6 534 aaKnown RBP18.3■□□□□ 0.52
MSRB3-209ENST00000540804 BICC1Q9H694 974 aaKnown RBP18.3■□□□□ 0.52
MSRB3-209ENST00000540804 SLC10A3P09131 477 aa18.29■□□□□ 0.52
MSRB3-209ENST00000540804 ANKRD44Q8N8A2 993 aa18.29■□□□□ 0.52
MSRB3-209ENST00000540804 UTYO14607 1347 aa18.28■□□□□ 0.52
MSRB3-209ENST00000540804 AOX1Q06278 1338 aa18.28■□□□□ 0.52
MSRB3-209ENST00000540804 CACNA1FO60840 1977 aa18.28■□□□□ 0.52
MSRB3-209ENST00000540804 IL1R1P14778 569 aa18.28■□□□□ 0.52
MSRB3-209ENST00000540804 PRKG1Q13976 671 aa18.28■□□□□ 0.52
MSRB3-209ENST00000540804 LRRC24Q50LG9 513 aa18.28■□□□□ 0.52
MSRB3-209ENST00000540804 RASAL3Q86YV0 1011 aa18.28■□□□□ 0.52
MSRB3-209ENST00000540804 KLHDC4Q8TBB5 520 aa18.28■□□□□ 0.52
MSRB3-209ENST00000540804 CCDC102AQ96A19 550 aa18.28■□□□□ 0.52
MSRB3-209ENST00000540804 ABHD8Q96I13 439 aa18.28■□□□□ 0.52
MSRB3-209ENST00000540804 ZBED3Q96IU2 234 aaPredicted RBP18.28■□□□□ 0.52
MSRB3-209ENST00000540804 FZD1Q9UP38 647 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms