RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 ZNF408Q9H9D4 720 aa20.86■□□□□ 0.93
UBC-208ENST00000540700 ADARB2Q9NS39 739 aaKnown RBP20.86■□□□□ 0.93
UBC-208ENST00000540700 GRIPAP1Q4V328 841 aa20.85■□□□□ 0.93
UBC-208ENST00000540700 SAPCD2Q86UD0 394 aa20.85■□□□□ 0.93
UBC-208ENST00000540700 GLIS2Q9BZE0 524 aaPredicted RBP20.85■□□□□ 0.93
UBC-208ENST00000540700 GPRC5DQ9NZD1 345 aa20.85■□□□□ 0.93
UBC-208ENST00000540700 THSD7BQ9C0I4 1608 aa20.85■□□□□ 0.93
UBC-208ENST00000540700 ANKRD18BA2A2Z9 1011 aa20.84■□□□□ 0.93
UBC-208ENST00000540700 IFIT5Q13325 482 aaKnown RBP20.84■□□□□ 0.93
UBC-208ENST00000540700 TMX4Q9H1E5 349 aaPredicted RBP20.84■□□□□ 0.93
UBC-208ENST00000540700 PA2G4Q9UQ80 394 aaKnown RBP20.84■□□□□ 0.93
UBC-208ENST00000540700 PCDHB15Q9Y5E8 787 aa20.84■□□□□ 0.93
UBC-208ENST00000540700 LRRC37AA6NMS7 1700 aa20.84■□□□□ 0.93
UBC-208ENST00000540700 SPEF2Q9C093 1822 aa20.83■□□□□ 0.93
UBC-208ENST00000540700 RPS8P62241 208 aaKnown RBP20.83■□□□□ 0.93
UBC-208ENST00000540700 ATP8B2P98198 1209 aa20.83■□□□□ 0.93
UBC-208ENST00000540700 PTPN12Q05209 780 aaKnown RBP20.83■□□□□ 0.93
UBC-208ENST00000540700 POLA2Q14181 598 aa20.83■□□□□ 0.93
UBC-208ENST00000540700 PUS3Q9BZE2 481 aaKnown RBP20.83■□□□□ 0.93
UBC-208ENST00000540700 SRGAP3O43295 1099 aa20.82■□□□□ 0.92
UBC-208ENST00000540700 GMPSP49915 693 aaPredicted RBP20.82■□□□□ 0.92
UBC-208ENST00000540700 CXCL9Q07325 125 aa20.82■□□□□ 0.92
UBC-208ENST00000540700 CCDC57Q2TAC2 916 aa20.82■□□□□ 0.92
UBC-208ENST00000540700 ANKRD18AQ8IVF6 992 aa20.82■□□□□ 0.92
UBC-208ENST00000540700 CA12O43570 354 aa20.81■□□□□ 0.92
UBC-208ENST00000540700 DGKZQ13574 1117 aa20.81■□□□□ 0.92
UBC-208ENST00000540700 LRRC24Q50LG9 513 aa20.81■□□□□ 0.92
UBC-208ENST00000540700 CIAPIN1Q6FI81 312 aa20.81■□□□□ 0.92
UBC-208ENST00000540700 SSH3Q8TE77 659 aa20.81■□□□□ 0.92
UBC-208ENST00000540700 CDC5LQ99459 802 aaKnown RBP20.81■□□□□ 0.92
UBC-208ENST00000540700 HDAC5Q9UQL6 1122 aa20.81■□□□□ 0.92
UBC-208ENST00000540700 BBOX1O75936 387 aa20.8■□□□□ 0.92
UBC-208ENST00000540700 ZNRF3Q9ULT6 936 aa20.8■□□□□ 0.92
UBC-208ENST00000540700 ATP6V0A2Q9Y487 856 aa20.8■□□□□ 0.92
UBC-208ENST00000540700 CHMP4BQ9H444 224 aaKnown RBP20.79■□□□□ 0.92
UBC-208ENST00000540700 BSDC1Q9NW68 430 aaPredicted RBP20.79■□□□□ 0.92
UBC-208ENST00000540700 DUOX1Q9NRD9 1551 aa20.79■□□□□ 0.92
UBC-208ENST00000540700 TRPM7Q96QT4 1865 aa20.78■□□□□ 0.92
UBC-208ENST00000540700 WTIPA6NIX2 430 aaPredicted RBP20.78■□□□□ 0.92
UBC-208ENST00000540700 RAD17O75943 681 aa20.78■□□□□ 0.92
UBC-208ENST00000540700 IGHMBP2P38935 993 aaKnown RBP20.78■□□□□ 0.92
UBC-208ENST00000540700 SP8Q8IXZ3 490 aa20.78■□□□□ 0.92
UBC-208ENST00000540700 COPRSQ9NQ92 184 aa20.78■□□□□ 0.92
UBC-208ENST00000540700 RIPOR2Q9Y4F9 1068 aa20.78■□□□□ 0.92
UBC-208ENST00000540700 GPSM2P81274 684 aa20.77■□□□□ 0.92
UBC-208ENST00000540700 ATG9AQ7Z3C6 839 aa20.77■□□□□ 0.92
UBC-208ENST00000540700 ZIC5Q96T25 663 aa20.77■□□□□ 0.92
UBC-208ENST00000540700 SIL1Q9H173 461 aa20.77■□□□□ 0.92
UBC-208ENST00000540700 MINPP1Q9UNW1 487 aa20.77■□□□□ 0.92
UBC-208ENST00000540700 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.77■□□□□ 0.92
UBC-208ENST00000540700 A0A1B0GUL6 1792 aa20.77■□□□□ 0.91
UBC-208ENST00000540700 HIRAP54198 1017 aaPredicted RBP20.76■□□□□ 0.91
UBC-208ENST00000540700 TAF7LQ5H9L4 462 aa20.76■□□□□ 0.91
UBC-208ENST00000540700 DPP8Q6V1X1 898 aaPredicted RBP20.76■□□□□ 0.91
UBC-208ENST00000540700 RPAP2Q8IXW5 612 aaPredicted RBP20.76■□□□□ 0.91
UBC-208ENST00000540700 SUPT20HQ8NEM7 779 aa20.76■□□□□ 0.91
UBC-208ENST00000540700 TRPM4Q8TD43 1214 aa20.76■□□□□ 0.91
UBC-208ENST00000540700 HHIPL1Q96JK4 782 aa20.76■□□□□ 0.91
UBC-208ENST00000540700 MPHOSPH8Q99549 860 aa20.76■□□□□ 0.91
UBC-208ENST00000540700 CASP8AP2Q9UKL3 1982 aa20.76■□□□□ 0.91
UBC-208ENST00000540700 SHTN1A0MZ66 631 aa20.75■□□□□ 0.91
UBC-208ENST00000540700 SNAP23O00161 211 aa20.75■□□□□ 0.91
UBC-208ENST00000540700 CHRNDQ07001 517 aa20.75■□□□□ 0.91
UBC-208ENST00000540700 DLK2Q6UY11 383 aa20.75■□□□□ 0.91
UBC-208ENST00000540700 LDHAL6AQ6ZMR3 332 aa20.75■□□□□ 0.91
UBC-208ENST00000540700 CDC37L1Q7L3B6 337 aa20.75■□□□□ 0.91
UBC-208ENST00000540700 VPS33BQ9H267 617 aa20.75■□□□□ 0.91
UBC-208ENST00000540700 PGAP2Q9UHJ9 254 aa20.75■□□□□ 0.91
UBC-208ENST00000540700 TNRC18O15417 2968 aaPredicted RBP20.74■□□□□ 0.91
UBC-208ENST00000540700 EYA2O00167 538 aa20.74■□□□□ 0.91
UBC-208ENST00000540700 PDE4DIPQ5VU43 2346 aa20.74■□□□□ 0.91
UBC-208ENST00000540700 TMC4Q7Z404 712 aa20.74■□□□□ 0.91
UBC-208ENST00000540700 USP48Q86UV5 1035 aa20.74■□□□□ 0.91
UBC-208ENST00000540700 MPNDQ8N594 471 aa20.74■□□□□ 0.91
UBC-208ENST00000540700 VGLL2Q8N8G2 317 aa20.74■□□□□ 0.91
UBC-208ENST00000540700 HELBQ8NG08 1087 aaPredicted RBP20.74■□□□□ 0.91
UBC-208ENST00000540700 RTFDC1Q9BY42 306 aaPredicted RBP20.74■□□□□ 0.91
UBC-208ENST00000540700 TAF5LO75529 589 aa20.73■□□□□ 0.91
UBC-208ENST00000540700 HUNKP57058 714 aa20.73■□□□□ 0.91
UBC-208ENST00000540700 NOGQ13253 232 aa20.73■□□□□ 0.91
UBC-208ENST00000540700 TNIP1Q15025 636 aa20.73■□□□□ 0.91
UBC-208ENST00000540700 ZC3H15Q8WU90 426 aaKnown RBP20.73■□□□□ 0.91
UBC-208ENST00000540700 CNNM1Q9NRU3 951 aa20.73■□□□□ 0.91
UBC-208ENST00000540700 PCDH10Q9P2E7 1040 aa20.73■□□□□ 0.91
UBC-208ENST00000540700 CIAO1O76071 339 aa20.72■□□□□ 0.91
UBC-208ENST00000540700 KIAA2012Q0VF49 1180 aa20.72■□□□□ 0.91
UBC-208ENST00000540700 POLLQ9UGP5 575 aa20.72■□□□□ 0.91
UBC-208ENST00000540700 CNOT7Q9UIV1 285 aaKnown RBP20.72■□□□□ 0.91
UBC-208ENST00000540700 NOP58Q9Y2X3 529 aaKnown RBP20.72■□□□□ 0.91
UBC-208ENST00000540700 SASH1O94885 1247 aa20.71■□□□□ 0.91
UBC-208ENST00000540700 PODXL2Q9NZ53 605 aa20.71■□□□□ 0.91
UBC-208ENST00000540700 NSFL1CQ9UNZ2 370 aaKnown RBP20.71■□□□□ 0.91
UBC-208ENST00000540700 EXOC6BQ9Y2D4 811 aa20.71■□□□□ 0.91
UBC-208ENST00000540700 H7C1D1 291 aa20.7■□□□□ 0.9
UBC-208ENST00000540700 SURF6O75683 361 aaKnown RBP20.7■□□□□ 0.9
UBC-208ENST00000540700 KLRK1P26718 216 aa20.7■□□□□ 0.9
UBC-208ENST00000540700 MICALL2Q8IY33 904 aa20.7■□□□□ 0.9
UBC-208ENST00000540700 TBC1D16Q8TBP0 767 aa20.7■□□□□ 0.9
UBC-208ENST00000540700 YDJCA8MPS7 323 aa20.69■□□□□ 0.9
UBC-208ENST00000540700 SOX10P56693 466 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms