RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 CIAO1O76071 339 aa13.11□□□□□ -0.31
ATL3-204ENST00000540699 ATP2B4P23634 1241 aa13.11□□□□□ -0.31
ATL3-204ENST00000540699 LRRC24Q50LG9 513 aa13.11□□□□□ -0.31
ATL3-204ENST00000540699 ATG9AQ7Z3C6 839 aa13.11□□□□□ -0.31
ATL3-204ENST00000540699 VGLL2Q8N8G2 317 aa13.11□□□□□ -0.31
ATL3-204ENST00000540699 KLHDC4Q8TBB5 520 aa13.11□□□□□ -0.31
ATL3-204ENST00000540699 ANKIB1Q9P2G1 1089 aa13.11□□□□□ -0.31
ATL3-204ENST00000540699 GGA1Q9UJY5 639 aa13.11□□□□□ -0.31
ATL3-204ENST00000540699 IRS2Q9Y4H2 1338 aa13.11□□□□□ -0.31
ATL3-204ENST00000540699 MED23Q9ULK4 1368 aa13.1□□□□□ -0.31
ATL3-204ENST00000540699 UFL1O94874 794 aa13.1□□□□□ -0.31
ATL3-204ENST00000540699 NUCB1Q02818 461 aa13.1□□□□□ -0.31
ATL3-204ENST00000540699 C15orf52Q6ZUT6 534 aaKnown RBP13.1□□□□□ -0.31
ATL3-204ENST00000540699 EYA3Q99504 573 aa13.1□□□□□ -0.31
ATL3-204ENST00000540699 WTIPA6NIX2 430 aaPredicted RBP13.09□□□□□ -0.31
ATL3-204ENST00000540699 C6orf229H3BNL8 230 aa13.09□□□□□ -0.31
ATL3-204ENST00000540699 FZD9O00144 591 aa13.09□□□□□ -0.31
ATL3-204ENST00000540699 PPIP5K2O43314 1243 aa13.09□□□□□ -0.31
ATL3-204ENST00000540699 HMMRO75330 724 aa13.09□□□□□ -0.31
ATL3-204ENST00000540699 HSPA1AP0DMV8 641 aaKnown RBP13.09□□□□□ -0.31
ATL3-204ENST00000540699 HSPA1BP0DMV9 641 aaKnown RBP13.09□□□□□ -0.31
ATL3-204ENST00000540699 AOC3Q16853 763 aa13.09□□□□□ -0.31
ATL3-204ENST00000540699 WASHC4Q2M389 1173 aa13.09□□□□□ -0.31
ATL3-204ENST00000540699 PCDH10Q9P2E7 1040 aa13.09□□□□□ -0.31
ATL3-204ENST00000540699 PA2G4Q9UQ80 394 aaKnown RBP13.09□□□□□ -0.31
ATL3-204ENST00000540699 ZNF804BA4D1E1 1349 aa13.09□□□□□ -0.31
ATL3-204ENST00000540699 DDNO94850 711 aaPredicted RBP13.08□□□□□ -0.32
ATL3-204ENST00000540699 PDE4AP27815 886 aa13.08□□□□□ -0.32
ATL3-204ENST00000540699 IL15P40933 162 aaPredicted RBP13.08□□□□□ -0.32
ATL3-204ENST00000540699 UBE4AQ14139 1066 aa13.08□□□□□ -0.32
ATL3-204ENST00000540699 LARGE2Q8N3Y3 721 aa13.08□□□□□ -0.32
ATL3-204ENST00000540699 HELBQ8NG08 1087 aaPredicted RBP13.08□□□□□ -0.32
ATL3-204ENST00000540699 GPR101Q96P66 508 aaPredicted RBP13.08□□□□□ -0.32
ATL3-204ENST00000540699 NOP58Q9Y2X3 529 aaKnown RBP13.08□□□□□ -0.32
ATL3-204ENST00000540699 ADAMTSL1Q8N6G6 1762 aa13.07□□□□□ -0.32
ATL3-204ENST00000540699 TAF5LO75529 589 aa13.07□□□□□ -0.32
ATL3-204ENST00000540699 PDE8BO95263 885 aa13.07□□□□□ -0.32
ATL3-204ENST00000540699 JDP2Q8WYK2 163 aa13.07□□□□□ -0.32
ATL3-204ENST00000540699 ZC3H12CQ9C0D7 883 aaKnown RBP13.07□□□□□ -0.32
ATL3-204ENST00000540699 MYH13Q9UKX3 1938 aa13.07□□□□□ -0.32
ATL3-204ENST00000540699 SNAP23O00161 211 aa13.06□□□□□ -0.32
ATL3-204ENST00000540699 POTEIP0CG38 1075 aa13.06□□□□□ -0.32
ATL3-204ENST00000540699 POTEJP0CG39 1038 aa13.06□□□□□ -0.32
ATL3-204ENST00000540699 FGFR2P21802 821 aa13.06□□□□□ -0.32
ATL3-204ENST00000540699 RGS3P49796 1198 aa13.06□□□□□ -0.32
ATL3-204ENST00000540699 METTL24Q5JXM2 366 aa13.06□□□□□ -0.32
ATL3-204ENST00000540699 CHADLQ6NUI6 762 aa13.06□□□□□ -0.32
ATL3-204ENST00000540699 CHD1LQ86WJ1 897 aa13.06□□□□□ -0.32
ATL3-204ENST00000540699 NIM1KQ8IY84 436 aa13.06□□□□□ -0.32
ATL3-204ENST00000540699 L3MBTL3Q96JM7 780 aaPredicted RBP13.06□□□□□ -0.32
ATL3-204ENST00000540699 SIL1Q9H173 461 aa13.06□□□□□ -0.32
ATL3-204ENST00000540699 ZNRF3Q9ULT6 936 aa13.06□□□□□ -0.32
ATL3-204ENST00000540699 ZNF541Q9H0D2 1346 aa13.06□□□□□ -0.32
ATL3-204ENST00000540699 YDJCA8MPS7 323 aa13.05□□□□□ -0.32
ATL3-204ENST00000540699 RIMBP2O15034 1052 aa13.05□□□□□ -0.32
ATL3-204ENST00000540699 KLRK1P26718 216 aa13.05□□□□□ -0.32
ATL3-204ENST00000540699 TXNRD3Q86VQ6 643 aa13.05□□□□□ -0.32
ATL3-204ENST00000540699 TSHZ2Q9NRE2 1034 aa13.05□□□□□ -0.32
ATL3-204ENST00000540699 ZNF609O15014 1411 aa13.05□□□□□ -0.32
ATL3-204ENST00000540699 IQCA1LA6NCM1 817 aa13.04□□□□□ -0.32
ATL3-204ENST00000540699 SASH1O94885 1247 aa13.04□□□□□ -0.32
ATL3-204ENST00000540699 KCNJ4P48050 445 aa13.04□□□□□ -0.32
ATL3-204ENST00000540699 PUM3Q15397 648 aaKnown RBP13.04□□□□□ -0.32
ATL3-204ENST00000540699 ANKRD45Q5TZF3 282 aa13.04□□□□□ -0.32
ATL3-204ENST00000540699 PODNQ7Z5L7 613 aa13.04□□□□□ -0.32
ATL3-204ENST00000540699 LNPKQ9C0E8 428 aa13.04□□□□□ -0.32
ATL3-204ENST00000540699 COA1Q9GZY4 146 aa13.04□□□□□ -0.32
ATL3-204ENST00000540699 CEP126Q9P2H0 1117 aa13.04□□□□□ -0.32
ATL3-204ENST00000540699 ZBTB22O15209 634 aa13.03□□□□□ -0.32
ATL3-204ENST00000540699 ECE2O60344 883 aa13.03□□□□□ -0.32
ATL3-204ENST00000540699 SURF6O75683 361 aaKnown RBP13.03□□□□□ -0.32
ATL3-204ENST00000540699 CXCL9Q07325 125 aa13.03□□□□□ -0.32
ATL3-204ENST00000540699 G3BP1Q13283 466 aaKnown RBP eCLIP13.03□□□□□ -0.32
ATL3-204ENST00000540699 TAF1DQ9H5J8 278 aaPredicted RBP13.03□□□□□ -0.32
ATL3-204ENST00000540699 DBNDD1Q9H9R9 158 aa13.03□□□□□ -0.32
ATL3-204ENST00000540699 GPR108Q9NPR9 543 aa13.03□□□□□ -0.32
ATL3-204ENST00000540699 CREBZFQ9NS37 354 aa13.03□□□□□ -0.32
ATL3-204ENST00000540699 IL1R1P14778 569 aa13.02□□□□□ -0.33
ATL3-204ENST00000540699 EIF6P56537 245 aaKnown RBP13.02□□□□□ -0.33
ATL3-204ENST00000540699 TFCP2Q12800 502 aa13.02□□□□□ -0.33
ATL3-204ENST00000540699 ATP2B3Q16720 1220 aa13.02□□□□□ -0.33
ATL3-204ENST00000540699 DOK7Q18PE1 504 aa13.02□□□□□ -0.33
ATL3-204ENST00000540699 FBXO33Q7Z6M2 555 aa13.02□□□□□ -0.33
ATL3-204ENST00000540699 LDHDQ86WU2 507 aa13.02□□□□□ -0.33
ATL3-204ENST00000540699 GPC2Q8N158 579 aa13.02□□□□□ -0.33
ATL3-204ENST00000540699 LPIN2Q92539 896 aa13.02□□□□□ -0.33
ATL3-204ENST00000540699 FAM84BQ96KN1 310 aaPredicted RBP13.02□□□□□ -0.33
ATL3-204ENST00000540699 CD209Q9NNX6 404 aa13.02□□□□□ -0.33
ATL3-204ENST00000540699 EXOC6BQ9Y2D4 811 aa13.02□□□□□ -0.33
ATL3-204ENST00000540699 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.02□□□□□ -0.33
ATL3-204ENST00000540699 PASKQ96RG2 1323 aa13.02□□□□□ -0.33
ATL3-204ENST00000540699 HSP90AB4PQ58FF6 505 aa13.01□□□□□ -0.33
ATL3-204ENST00000540699 ZNF804AQ7Z570 1209 aa13.01□□□□□ -0.33
ATL3-204ENST00000540699 AKAP2Q9Y2D5 859 aa13.01□□□□□ -0.33
ATL3-204ENST00000540699 AKAP11Q9UKA4 1901 aa13□□□□□ -0.33
ATL3-204ENST00000540699 SALL3Q9BXA9 1300 aa13□□□□□ -0.33
ATL3-204ENST00000540699 RAB11FIP3O75154 756 aa13□□□□□ -0.33
ATL3-204ENST00000540699 IFIT1P09914 478 aaKnown RBP13□□□□□ -0.33
ATL3-204ENST00000540699 SLC5A1P13866 664 aa13□□□□□ -0.33
ATL3-204ENST00000540699 HIBADHP31937 336 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms