RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 SAMD1Q6SPF0 538 aaPredicted RBP13.08□□□□□ -0.32
CDCA3-208ENST00000540683 PAXIP1Q6ZW49 1069 aaPredicted RBP13.08□□□□□ -0.32
CDCA3-208ENST00000540683 KRT26Q7Z3Y9 468 aa13.08□□□□□ -0.32
CDCA3-208ENST00000540683 C2orf69Q8N8R5 385 aa13.08□□□□□ -0.32
CDCA3-208ENST00000540683 SPINK5Q9NQ38 1064 aaPredicted RBP13.08□□□□□ -0.32
CDCA3-208ENST00000540683 ZBTB12Q9Y330 459 aaPredicted RBP13.08□□□□□ -0.32
CDCA3-208ENST00000540683 TLL2Q9Y6L7 1015 aa13.08□□□□□ -0.32
CDCA3-208ENST00000540683 PSME4Q14997 1843 aa13.08□□□□□ -0.32
CDCA3-208ENST00000540683 PITPNM2Q9BZ72 1349 aa13.08□□□□□ -0.32
CDCA3-208ENST00000540683 F6X3S4 739 aa13.07□□□□□ -0.32
CDCA3-208ENST00000540683 CTCFP49711 727 aaPredicted RBP13.07□□□□□ -0.32
CDCA3-208ENST00000540683 VEGFBP49765 207 aa13.07□□□□□ -0.32
CDCA3-208ENST00000540683 CHRNDQ07001 517 aa13.07□□□□□ -0.32
CDCA3-208ENST00000540683 LMBR1LQ6UX01 489 aa13.07□□□□□ -0.32
CDCA3-208ENST00000540683 LDHAL6AQ6ZMR3 332 aa13.07□□□□□ -0.32
CDCA3-208ENST00000540683 C15orf52Q6ZUT6 534 aaKnown RBP13.07□□□□□ -0.32
CDCA3-208ENST00000540683 CNNM1Q9NRU3 951 aa13.07□□□□□ -0.32
CDCA3-208ENST00000540683 PCNTO95613 3336 aa13.07□□□□□ -0.32
CDCA3-208ENST00000540683 WDR33Q9C0J8 1336 aaKnown RBP13.07□□□□□ -0.32
CDCA3-208ENST00000540683 SPEF2Q9C093 1822 aa13.06□□□□□ -0.32
CDCA3-208ENST00000540683 TBC1D10BQ4KMP7 808 aaPredicted RBP13.06□□□□□ -0.32
CDCA3-208ENST00000540683 TTLL5Q6EMB2 1281 aa13.06□□□□□ -0.32
CDCA3-208ENST00000540683 SAMD7Q7Z3H4 446 aa13.06□□□□□ -0.32
CDCA3-208ENST00000540683 SLC51AQ86UW1 340 aa13.06□□□□□ -0.32
CDCA3-208ENST00000540683 TRPM4Q8TD43 1214 aa13.06□□□□□ -0.32
CDCA3-208ENST00000540683 MROH5Q6ZUA9 1318 aa13.06□□□□□ -0.32
CDCA3-208ENST00000540683 NF2P35240 595 aa13.05□□□□□ -0.32
CDCA3-208ENST00000540683 FKBP1BP68106 108 aa13.05□□□□□ -0.32
CDCA3-208ENST00000540683 FOXO4P98177 505 aa13.05□□□□□ -0.32
CDCA3-208ENST00000540683 RBM26Q5T8P6 1007 aaKnown RBP13.05□□□□□ -0.32
CDCA3-208ENST00000540683 REM2Q8IYK8 340 aaPredicted RBP13.05□□□□□ -0.32
CDCA3-208ENST00000540683 MRPL50Q8N5N7 158 aaKnown RBP13.05□□□□□ -0.32
CDCA3-208ENST00000540683 FBXW7Q969H0 707 aa13.05□□□□□ -0.32
CDCA3-208ENST00000540683 CCDC102AQ96A19 550 aa13.05□□□□□ -0.32
CDCA3-208ENST00000540683 CAPNS2Q96L46 248 aa13.05□□□□□ -0.32
CDCA3-208ENST00000540683 GLIS2Q9BZE0 524 aaPredicted RBP13.05□□□□□ -0.32
CDCA3-208ENST00000540683 MYOZ2Q9NPC6 264 aa13.05□□□□□ -0.32
CDCA3-208ENST00000540683 PRDM10Q9NQV6 1147 aa13.05□□□□□ -0.32
CDCA3-208ENST00000540683 SMC4Q9NTJ3 1288 aa13.05□□□□□ -0.32
CDCA3-208ENST00000540683 UTYO14607 1347 aa13.05□□□□□ -0.32
CDCA3-208ENST00000540683 MYO1BO43795 1136 aa13.04□□□□□ -0.32
CDCA3-208ENST00000540683 HIRAP54198 1017 aaPredicted RBP13.04□□□□□ -0.32
CDCA3-208ENST00000540683 FKBP1AP62942 108 aaKnown RBP13.04□□□□□ -0.32
CDCA3-208ENST00000540683 NOGQ13253 232 aa13.04□□□□□ -0.32
CDCA3-208ENST00000540683 UBE4AQ14139 1066 aa13.04□□□□□ -0.32
CDCA3-208ENST00000540683 SAPCD2Q86UD0 394 aa13.04□□□□□ -0.32
CDCA3-208ENST00000540683 GPR101Q96P66 508 aaPredicted RBP13.04□□□□□ -0.32
CDCA3-208ENST00000540683 API5Q9BZZ5 524 aaKnown RBP13.04□□□□□ -0.32
CDCA3-208ENST00000540683 ZNF408Q9H9D4 720 aa13.04□□□□□ -0.32
CDCA3-208ENST00000540683 KIF16BQ96L93 1317 aa13.04□□□□□ -0.32
CDCA3-208ENST00000540683 TRAF5O00463 557 aa13.03□□□□□ -0.32
CDCA3-208ENST00000540683 IPO8O15397 1037 aaKnown RBP13.03□□□□□ -0.32
CDCA3-208ENST00000540683 BRPF1P55201 1214 aaPredicted RBP13.03□□□□□ -0.32
CDCA3-208ENST00000540683 SCARF1Q14162 830 aa13.03□□□□□ -0.32
CDCA3-208ENST00000540683 CST9Q5W186 159 aa13.03□□□□□ -0.32
CDCA3-208ENST00000540683 USP48Q86UV5 1035 aa13.03□□□□□ -0.32
CDCA3-208ENST00000540683 GMLQ99445 158 aa13.03□□□□□ -0.32
CDCA3-208ENST00000540683 GBA2Q9HCG7 927 aaPredicted RBP13.03□□□□□ -0.32
CDCA3-208ENST00000540683 GGA3Q9NZ52 723 aa13.03□□□□□ -0.32
CDCA3-208ENST00000540683 SCN9AQ15858 1988 aa13.02□□□□□ -0.32
CDCA3-208ENST00000540683 HUNKP57058 714 aa13.02□□□□□ -0.33
CDCA3-208ENST00000540683 CAVIN4Q5BKX8 364 aa13.02□□□□□ -0.33
CDCA3-208ENST00000540683 DACT2Q5SW24 774 aa13.02□□□□□ -0.33
CDCA3-208ENST00000540683 VPS37DQ86XT2 251 aa13.02□□□□□ -0.33
CDCA3-208ENST00000540683 APOBEC3FQ8IUX4 373 aaKnown RBP13.02□□□□□ -0.33
CDCA3-208ENST00000540683 TNS4Q8IZW8 715 aa13.02□□□□□ -0.33
CDCA3-208ENST00000540683 SSH1Q8WYL5 1049 aa13.02□□□□□ -0.33
CDCA3-208ENST00000540683 CD209Q9NNX6 404 aa13.02□□□□□ -0.33
CDCA3-208ENST00000540683 KCNQ5Q9NR82 932 aa13.02□□□□□ -0.33
CDCA3-208ENST00000540683 WBP1LQ9NX94 342 aa13.02□□□□□ -0.33
CDCA3-208ENST00000540683 FBXO3Q9UK99 471 aa13.02□□□□□ -0.33
CDCA3-208ENST00000540683 COL4A1P02462 1669 aa13.02□□□□□ -0.33
CDCA3-208ENST00000540683 IL1R1P14778 569 aa13.01□□□□□ -0.33
CDCA3-208ENST00000540683 RABL6Q3YEC7 729 aaPredicted RBP13.01□□□□□ -0.33
CDCA3-208ENST00000540683 TRMT2AQ8IZ69 625 aaKnown RBP13.01□□□□□ -0.33
CDCA3-208ENST00000540683 ARHGAP45Q92619 1136 aa13.01□□□□□ -0.33
CDCA3-208ENST00000540683 COL1A1P02452 1464 aaPredicted RBP13□□□□□ -0.33
CDCA3-208ENST00000540683 SASH1O94885 1247 aa13□□□□□ -0.33
CDCA3-208ENST00000540683 UBTFL1P0CB47 393 aaPredicted RBP13□□□□□ -0.33
CDCA3-208ENST00000540683 GTF2IP78347 998 aa13□□□□□ -0.33
CDCA3-208ENST00000540683 DLGAP5Q15398 846 aa13□□□□□ -0.33
CDCA3-208ENST00000540683 ANGEL2Q5VTE6 544 aaKnown RBP13□□□□□ -0.33
CDCA3-208ENST00000540683 THSD7BQ9C0I4 1608 aa12.99□□□□□ -0.33
CDCA3-208ENST00000540683 PLIN1O60240 522 aa12.99□□□□□ -0.33
CDCA3-208ENST00000540683 FRAT2O75474 233 aaPredicted RBP12.99□□□□□ -0.33
CDCA3-208ENST00000540683 TAF5LO75529 589 aa12.99□□□□□ -0.33
CDCA3-208ENST00000540683 NBPF7P0C2Y1 421 aaPredicted RBP12.99□□□□□ -0.33
CDCA3-208ENST00000540683 HIBADHP31937 336 aaKnown RBP12.99□□□□□ -0.33
CDCA3-208ENST00000540683 GRM1Q13255 1194 aa12.99□□□□□ -0.33
CDCA3-208ENST00000540683 METTL24Q5JXM2 366 aa12.99□□□□□ -0.33
CDCA3-208ENST00000540683 CYP4F22Q6NT55 531 aa12.99□□□□□ -0.33
CDCA3-208ENST00000540683 RGMBQ6NW40 437 aa12.99□□□□□ -0.33
CDCA3-208ENST00000540683 TBC1D22AQ8WUA7 517 aa12.99□□□□□ -0.33
CDCA3-208ENST00000540683 SUCLG2Q96I99 432 aa12.99□□□□□ -0.33
CDCA3-208ENST00000540683 BICC1Q9H694 974 aaKnown RBP12.99□□□□□ -0.33
CDCA3-208ENST00000540683 PPP2R3BQ9Y5P8 575 aa12.99□□□□□ -0.33
CDCA3-208ENST00000540683 SHTN1A0MZ66 631 aa12.98□□□□□ -0.33
CDCA3-208ENST00000540683 IFIT1P09914 478 aaKnown RBP12.98□□□□□ -0.33
CDCA3-208ENST00000540683 ZNF157P51786 506 aaPredicted RBP12.98□□□□□ -0.33
CDCA3-208ENST00000540683 TNFAIP1Q13829 316 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms