RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 CTU1Q7Z7A3 348 aaKnown RBP16.02■□□□□ 0.16
COPS7A-211ENST00000540408 COA1Q9GZY4 146 aa16.02■□□□□ 0.16
COPS7A-211ENST00000540408 MED23Q9ULK4 1368 aa16.01■□□□□ 0.15
COPS7A-211ENST00000540408 IGHMBP2P38935 993 aaKnown RBP16.01■□□□□ 0.15
COPS7A-211ENST00000540408 CCT4P50991 539 aaKnown RBP16.01■□□□□ 0.15
COPS7A-211ENST00000540408 STRIP1Q5VSL9 837 aa16.01■□□□□ 0.15
COPS7A-211ENST00000540408 GREM2Q9H772 168 aa16.01■□□□□ 0.15
COPS7A-211ENST00000540408 HDAC9Q9UKV0 1011 aa16.01■□□□□ 0.15
COPS7A-211ENST00000540408 LEMD3Q9Y2U8 911 aa16.01■□□□□ 0.15
COPS7A-211ENST00000540408 AKAP11Q9UKA4 1901 aa16.01■□□□□ 0.15
COPS7A-211ENST00000540408 NBPF9Q3BBW0 867 aa16■□□□□ 0.15
COPS7A-211ENST00000540408 UBE2Q2LH0YL09 131 aa15.99■□□□□ 0.15
COPS7A-211ENST00000540408 IGKV5-2P06315 115 aa15.99■□□□□ 0.15
COPS7A-211ENST00000540408 PKN2Q16513 984 aaKnown RBP15.99■□□□□ 0.15
COPS7A-211ENST00000540408 DACT2Q5SW24 774 aa15.99■□□□□ 0.15
COPS7A-211ENST00000540408 TSPYL6Q8N831 410 aa15.99■□□□□ 0.15
COPS7A-211ENST00000540408 MPHOSPH8Q99549 860 aa15.99■□□□□ 0.15
COPS7A-211ENST00000540408 ANKRD2Q9GZV1 360 aa15.99■□□□□ 0.15
COPS7A-211ENST00000540408 PAPPA2Q9BXP8 1791 aa15.98■□□□□ 0.15
COPS7A-211ENST00000540408 NEURL1BA8MQ27 555 aa15.98■□□□□ 0.15
COPS7A-211ENST00000540408 WNT10BO00744 389 aa15.98■□□□□ 0.15
COPS7A-211ENST00000540408 CWF19L2Q2TBE0 894 aaKnown RBP15.98■□□□□ 0.15
COPS7A-211ENST00000540408 TTLL5Q6EMB2 1281 aa15.98■□□□□ 0.15
COPS7A-211ENST00000540408 MOB2Q70IA6 237 aa15.98■□□□□ 0.15
COPS7A-211ENST00000540408 ARMC9Q7Z3E5 817 aa15.98■□□□□ 0.15
COPS7A-211ENST00000540408 UBE3BQ7Z3V4 1068 aa15.98■□□□□ 0.15
COPS7A-211ENST00000540408 SCAF8Q9UPN6 1271 aaKnown RBP15.98■□□□□ 0.15
COPS7A-211ENST00000540408 WTIPA6NIX2 430 aaPredicted RBP15.97■□□□□ 0.15
COPS7A-211ENST00000540408 H7C1W4 665 aa15.97■□□□□ 0.15
COPS7A-211ENST00000540408 SLC4A2P04920 1241 aa15.97■□□□□ 0.15
COPS7A-211ENST00000540408 KCNJ4P48050 445 aa15.97■□□□□ 0.15
COPS7A-211ENST00000540408 SOX10P56693 466 aa15.97■□□□□ 0.15
COPS7A-211ENST00000540408 SREBF2Q12772 1141 aa15.97■□□□□ 0.15
COPS7A-211ENST00000540408 PRAMEF18Q5VWM3 479 aa15.97■□□□□ 0.15
COPS7A-211ENST00000540408 APOBEC3FQ8IUX4 373 aaKnown RBP15.97■□□□□ 0.15
COPS7A-211ENST00000540408 TSR2Q969E8 191 aaKnown RBP15.97■□□□□ 0.15
COPS7A-211ENST00000540408 MXD3Q9BW11 206 aa15.97■□□□□ 0.15
COPS7A-211ENST00000540408 ZNF804BA4D1E1 1349 aa15.96■□□□□ 0.15
COPS7A-211ENST00000540408 PSME4Q14997 1843 aa15.96■□□□□ 0.15
COPS7A-211ENST00000540408 TBC1D8O95759 1140 aa15.96■□□□□ 0.15
COPS7A-211ENST00000540408 ITGA6P23229 1130 aa15.96■□□□□ 0.15
COPS7A-211ENST00000540408 TM4SF4P48230 202 aa15.96■□□□□ 0.15
COPS7A-211ENST00000540408 TWISTNBQ3B726 338 aaPredicted RBP15.96■□□□□ 0.15
COPS7A-211ENST00000540408 MYH16Q9H6N6 1097 aa15.96■□□□□ 0.15
COPS7A-211ENST00000540408 KIAA0825Q8IV33 1275 aa15.95■□□□□ 0.14
COPS7A-211ENST00000540408 PLA2G12BQ9BX93 195 aa15.95■□□□□ 0.14
COPS7A-211ENST00000540408 SASH1O94885 1247 aa15.94■□□□□ 0.14
COPS7A-211ENST00000540408 GTF2IP78347 998 aa15.94■□□□□ 0.14
COPS7A-211ENST00000540408 GCKRQ14397 625 aa15.94■□□□□ 0.14
COPS7A-211ENST00000540408 CCDC27Q2M243 656 aa15.94■□□□□ 0.14
COPS7A-211ENST00000540408 TXNRD3Q86VQ6 643 aa15.94■□□□□ 0.14
COPS7A-211ENST00000540408 ZNF296Q8WUU4 475 aaPredicted RBP15.94■□□□□ 0.14
COPS7A-211ENST00000540408 HPS5Q9UPZ3 1129 aa15.94■□□□□ 0.14
COPS7A-211ENST00000540408 FKBP5Q13451 457 aaPredicted RBP15.93■□□□□ 0.14
COPS7A-211ENST00000540408 PRKG1Q13976 671 aa15.93■□□□□ 0.14
COPS7A-211ENST00000540408 NOM1Q5C9Z4 860 aaKnown RBP15.93■□□□□ 0.14
COPS7A-211ENST00000540408 G2E3Q7L622 706 aa15.93■□□□□ 0.14
COPS7A-211ENST00000540408 ANKRD18BA2A2Z9 1011 aa15.92■□□□□ 0.14
COPS7A-211ENST00000540408 GPR25O00155 361 aa15.92■□□□□ 0.14
COPS7A-211ENST00000540408 CSF1RP07333 972 aa15.92■□□□□ 0.14
COPS7A-211ENST00000540408 PTPN12Q05209 780 aaKnown RBP15.92■□□□□ 0.14
COPS7A-211ENST00000540408 FLIIQ13045 1269 aa15.92■□□□□ 0.14
COPS7A-211ENST00000540408 MKRN3Q13064 507 aaKnown RBP15.92■□□□□ 0.14
COPS7A-211ENST00000540408 DLGAP5Q15398 846 aa15.92■□□□□ 0.14
COPS7A-211ENST00000540408 WWC1Q8IX03 1113 aa15.92■□□□□ 0.14
COPS7A-211ENST00000540408 LINS1Q8NG48 757 aa15.92■□□□□ 0.14
COPS7A-211ENST00000540408 DNAAF4Q8WXU2 420 aa15.92■□□□□ 0.14
COPS7A-211ENST00000540408 MYH3P11055 1940 aa15.92■□□□□ 0.14
COPS7A-211ENST00000540408 MYO1BO43795 1136 aa15.91■□□□□ 0.14
COPS7A-211ENST00000540408 ALDH1A1P00352 501 aa15.91■□□□□ 0.14
COPS7A-211ENST00000540408 INHBEP58166 350 aa15.91■□□□□ 0.14
COPS7A-211ENST00000540408 CHRNDQ07001 517 aa15.91■□□□□ 0.14
COPS7A-211ENST00000540408 SLC10A4Q96EP9 437 aa15.91■□□□□ 0.14
COPS7A-211ENST00000540408 CD209Q9NNX6 404 aa15.91■□□□□ 0.14
COPS7A-211ENST00000540408 PCDH10Q9P2E7 1040 aa15.91■□□□□ 0.14
COPS7A-211ENST00000540408 ANGEL1Q9UNK9 670 aaKnown RBP15.91■□□□□ 0.14
COPS7A-211ENST00000540408 IL16Q14005 1332 aa15.91■□□□□ 0.14
COPS7A-211ENST00000540408 PPP1R12BO60237 982 aaPredicted RBP15.9■□□□□ 0.14
COPS7A-211ENST00000540408 FKTNO75072 461 aa15.9■□□□□ 0.14
COPS7A-211ENST00000540408 IFIT5Q13325 482 aaKnown RBP15.9■□□□□ 0.14
COPS7A-211ENST00000540408 DEFB129Q9H1M3 183 aa15.9■□□□□ 0.14
COPS7A-211ENST00000540408 MANSC4A6NHS7 340 aaPredicted RBP15.89■□□□□ 0.13
COPS7A-211ENST00000540408 KLRK1P26718 216 aa15.89■□□□□ 0.13
COPS7A-211ENST00000540408 SUPT20HL1Q3ZLR7 823 aa15.89■□□□□ 0.13
COPS7A-211ENST00000540408 LDLRAD1Q5T700 205 aa15.89■□□□□ 0.13
COPS7A-211ENST00000540408 SPRYD7Q5W111 196 aa15.89■□□□□ 0.13
COPS7A-211ENST00000540408 FBXO46Q6PJ61 603 aaPredicted RBP15.89■□□□□ 0.13
COPS7A-211ENST00000540408 ZNF804AQ7Z570 1209 aa15.89■□□□□ 0.13
COPS7A-211ENST00000540408 CFHR5Q9BXR6 569 aa15.89■□□□□ 0.13
COPS7A-211ENST00000540408 CHMP3Q9Y3E7 222 aa15.89■□□□□ 0.13
COPS7A-211ENST00000540408 PPP2R3BQ9Y5P8 575 aa15.89■□□□□ 0.13
COPS7A-211ENST00000540408 SPEF2Q9C093 1822 aa15.89■□□□□ 0.13
COPS7A-211ENST00000540408 CASP7P55210 303 aa15.88■□□□□ 0.13
COPS7A-211ENST00000540408 NCBP3Q53F19 620 aaKnown RBP15.88■□□□□ 0.13
COPS7A-211ENST00000540408 C15orf52Q6ZUT6 534 aaKnown RBP15.88■□□□□ 0.13
COPS7A-211ENST00000540408 MTMR14Q8NCE2 650 aa15.88■□□□□ 0.13
COPS7A-211ENST00000540408 ZBED3Q96IU2 234 aaPredicted RBP15.88■□□□□ 0.13
COPS7A-211ENST00000540408 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.88■□□□□ 0.13
COPS7A-211ENST00000540408 COL1A1P02452 1464 aaPredicted RBP15.88■□□□□ 0.13
COPS7A-211ENST00000540408 UNCXA6NJT0 531 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms